RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 GRIPAP1Q4V328 841 aa8.63□□□□□ -1.03
SMC4-225ENST00000497203 MOXD2PA6NHM9 499 aa8.62□□□□□ -1.03
SMC4-225ENST00000497203 NDUFV2P19404 249 aa8.62□□□□□ -1.03
SMC4-225ENST00000497203 STK17AQ9UEE5 414 aa8.62□□□□□ -1.03
SMC4-225ENST00000497203 EMID1Q96A84 441 aaPredicted RBP8.61□□□□□ -1.03
SMC4-225ENST00000497203 THAP11Q96EK4 314 aa8.61□□□□□ -1.03
SMC4-225ENST00000497203 PLEKHG3A1L390 1219 aa8.6□□□□□ -1.03
SMC4-225ENST00000497203 RNF19BQ6ZMZ0 732 aa8.6□□□□□ -1.03
SMC4-225ENST00000497203 PCDHGC3Q9UN70 934 aa8.6□□□□□ -1.03
SMC4-225ENST00000497203 FDX1P10109 184 aa8.59□□□□□ -1.03
SMC4-225ENST00000497203 PRR20EP86478 221 aa8.59□□□□□ -1.03
SMC4-225ENST00000497203 PRR20CP86479 221 aa8.59□□□□□ -1.03
SMC4-225ENST00000497203 PRR20DP86480 221 aa8.59□□□□□ -1.03
SMC4-225ENST00000497203 PRR20BP86481 221 aa8.59□□□□□ -1.03
SMC4-225ENST00000497203 PRR20AP86496 221 aa8.59□□□□□ -1.03
SMC4-225ENST00000497203 BRICD5Q6PL45 260 aa8.59□□□□□ -1.03
SMC4-225ENST00000497203 RNF223E7ERA6 249 aa8.58□□□□□ -1.04
SMC4-225ENST00000497203 ADH1BP00325 375 aa8.58□□□□□ -1.04
SMC4-225ENST00000497203 DIXDC1Q155Q3 683 aa8.58□□□□□ -1.04
SMC4-225ENST00000497203 MYSM1Q5VVJ2 828 aa8.58□□□□□ -1.04
SMC4-225ENST00000497203 DDRGK1Q96HY6 314 aa8.58□□□□□ -1.04
SMC4-225ENST00000497203 SPSB2Q99619 263 aa8.58□□□□□ -1.04
SMC4-225ENST00000497203 DGAT1O75907 488 aa8.57□□□□□ -1.04
SMC4-225ENST00000497203 FMNL1O95466 1100 aaPredicted RBP8.57□□□□□ -1.04
SMC4-225ENST00000497203 SLC19A1P41440 591 aa8.57□□□□□ -1.04
SMC4-225ENST00000497203 MYT1Q01538 1121 aa8.57□□□□□ -1.04
SMC4-225ENST00000497203 RSBN1LQ6PCB5 846 aaPredicted RBP8.57□□□□□ -1.04
SMC4-225ENST00000497203 SYMPKQ92797 1274 aaKnown RBP8.57□□□□□ -1.04
SMC4-225ENST00000497203 SALL2Q9Y467 1007 aaPredicted RBP8.57□□□□□ -1.04
SMC4-225ENST00000497203 SPTLC1O15269 473 aa8.56□□□□□ -1.04
SMC4-225ENST00000497203 Q3C1V9 767 aa8.56□□□□□ -1.04
SMC4-225ENST00000497203 PKDCCQ504Y2 493 aa8.56□□□□□ -1.04
SMC4-225ENST00000497203 RIC3Q7Z5B4 369 aa8.56□□□□□ -1.04
SMC4-225ENST00000497203 FAM160A2Q8N612 972 aaPredicted RBP8.56□□□□□ -1.04
SMC4-225ENST00000497203 IL27Q8NEV9 243 aa8.56□□□□□ -1.04
SMC4-225ENST00000497203 LIMD1Q9UGP4 676 aa8.56□□□□□ -1.04
SMC4-225ENST00000497203 PCDHB15Q9Y5E8 787 aa8.56□□□□□ -1.04
SMC4-225ENST00000497203 S1PR4O95977 384 aa8.55□□□□□ -1.04
SMC4-225ENST00000497203 SPRYD7Q5W111 196 aa8.55□□□□□ -1.04
SMC4-225ENST00000497203 GJA5P36382 358 aa8.54□□□□□ -1.04
SMC4-225ENST00000497203 ZNF598Q86UK7 904 aaKnown RBP8.54□□□□□ -1.04
SMC4-225ENST00000497203 RSPH6AQ9H0K4 717 aa8.54□□□□□ -1.04
SMC4-225ENST00000497203 POLR3EQ9NVU0 708 aa8.54□□□□□ -1.04
SMC4-225ENST00000497203 ANKLE1Q8NAG6 615 aa8.53□□□□□ -1.04
SMC4-225ENST00000497203 USB1Q9BQ65 265 aaKnown RBP8.53□□□□□ -1.04
SMC4-225ENST00000497203 SLC6A16Q9GZN6 736 aa8.53□□□□□ -1.04
SMC4-225ENST00000497203 PRDM9Q9NQV7 894 aa8.53□□□□□ -1.04
SMC4-225ENST00000497203 C6orf229H3BNL8 230 aa8.52□□□□□ -1.05
SMC4-225ENST00000497203 CLK2P49760 499 aaKnown RBP8.52□□□□□ -1.05
SMC4-225ENST00000497203 CSPP1Q1MSJ5 1256 aa8.52□□□□□ -1.05
SMC4-225ENST00000497203 SH3D19Q5HYK7 790 aa8.52□□□□□ -1.05
SMC4-225ENST00000497203 PPEF1O14829 653 aaPredicted RBP8.51□□□□□ -1.05
SMC4-225ENST00000497203 MSS51Q4VC12 460 aa8.51□□□□□ -1.05
SMC4-225ENST00000497203 CABLES1Q8TDN4 633 aa8.51□□□□□ -1.05
SMC4-225ENST00000497203 GDF9O60383 454 aa8.5□□□□□ -1.05
SMC4-225ENST00000497203 SKIV2LQ15477 1246 aaKnown RBP8.5□□□□□ -1.05
SMC4-225ENST00000497203 QPCTQ16769 361 aa8.5□□□□□ -1.05
SMC4-225ENST00000497203 RETREG3Q86VR2 466 aa8.5□□□□□ -1.05
SMC4-225ENST00000497203 HRCP23327 699 aa8.49□□□□□ -1.05
SMC4-225ENST00000497203 MTMR2Q13614 643 aa8.49□□□□□ -1.05
SMC4-225ENST00000497203 TUSC1Q2TAM9 212 aa8.49□□□□□ -1.05
SMC4-225ENST00000497203 ZNF697Q5TEC3 545 aa8.49□□□□□ -1.05
SMC4-225ENST00000497203 LIAT1Q6ZQX7 453 aa8.49□□□□□ -1.05
SMC4-225ENST00000497203 PROCA1Q8NCQ7 364 aaPredicted RBP8.49□□□□□ -1.05
SMC4-225ENST00000497203 FAM187AA6NFU0 413 aa8.48□□□□□ -1.05
SMC4-225ENST00000497203 ZBTB3Q9H5J0 574 aa8.48□□□□□ -1.05
SMC4-225ENST00000497203 LILRB3O75022 631 aa8.47□□□□□ -1.05
SMC4-225ENST00000497203 MMP16P51512 607 aa8.47□□□□□ -1.05
SMC4-225ENST00000497203 PRPF38BQ5VTL8 546 aaKnown RBP8.47□□□□□ -1.05
SMC4-225ENST00000497203 FBXO31Q5XUX0 539 aaPredicted RBP8.47□□□□□ -1.05
SMC4-225ENST00000497203 SPDYE5A6NIY4 337 aa8.46□□□□□ -1.06
SMC4-225ENST00000497203 WIPF1O43516 503 aa8.46□□□□□ -1.06
SMC4-225ENST00000497203 DXOO77932 396 aaKnown RBP8.46□□□□□ -1.06
SMC4-225ENST00000497203 TMEM132AQ24JP5 1023 aa8.46□□□□□ -1.06
SMC4-225ENST00000497203 PRR7Q8TB68 274 aa8.46□□□□□ -1.06
SMC4-225ENST00000497203 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMC4-225ENST00000497203 CFAP99D6REC4 459 aa8.45□□□□□ -1.06
SMC4-225ENST00000497203 WFS1O76024 890 aa8.45□□□□□ -1.06
SMC4-225ENST00000497203 JUNDP17535 347 aa8.45□□□□□ -1.06
SMC4-225ENST00000497203 SUZ12Q15022 739 aaKnown RBP8.45□□□□□ -1.06
SMC4-225ENST00000497203 RTL5Q5HYW3 569 aaPredicted RBP8.45□□□□□ -1.06
SMC4-225ENST00000497203 PLA2G2CQ5R387 149 aa8.45□□□□□ -1.06
SMC4-225ENST00000497203 GOPCQ9HD26 462 aa8.45□□□□□ -1.06
SMC4-225ENST00000497203 FCF1Q9Y324 198 aaKnown RBP8.45□□□□□ -1.06
SMC4-225ENST00000497203 NUTM2BA6NNL0 878 aaPredicted RBP8.44□□□□□ -1.06
SMC4-225ENST00000497203 NUTM2EB1AL46 878 aaPredicted RBP8.44□□□□□ -1.06
SMC4-225ENST00000497203 TNFRSF10AO00220 468 aa8.44□□□□□ -1.06
SMC4-225ENST00000497203 INSM1Q01101 510 aaPredicted RBP8.44□□□□□ -1.06
SMC4-225ENST00000497203 NUTM2DQ5VT03 806 aaPredicted RBP8.44□□□□□ -1.06
SMC4-225ENST00000497203 NUTM2AQ8IVF1 878 aaPredicted RBP8.44□□□□□ -1.06
SMC4-225ENST00000497203 AAASQ9NRG9 546 aa8.44□□□□□ -1.06
SMC4-225ENST00000497203 ATP1B4Q9UN42 357 aaPredicted RBP8.44□□□□□ -1.06
SMC4-225ENST00000497203 ST8SIA5O15466 376 aa8.43□□□□□ -1.06
SMC4-225ENST00000497203 CRIPAKQ8N1N5 446 aa8.42□□□□□ -1.06
SMC4-225ENST00000497203 PCMTD1Q96MG8 357 aaPredicted RBP8.42□□□□□ -1.06
SMC4-225ENST00000497203 PPP2R2DQ66LE6 453 aa8.4□□□□□ -1.06
SMC4-225ENST00000497203 DESI1Q6ICB0 168 aa8.4□□□□□ -1.06
SMC4-225ENST00000497203 PER1O15534 1290 aaPredicted RBP8.39□□□□□ -1.07
SMC4-225ENST00000497203 NFX1Q12986 1120 aaKnown RBP8.39□□□□□ -1.07
SMC4-225ENST00000497203 CCDC24Q8N4L8 307 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms