RNA–Protein interactions for RNA: ENST00000497121.1

CPS1-208, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-208ENST00000497121 MYOM2P54296 1465 aa10.84□□□□□ -0.67
CPS1-208ENST00000497121 PNPLA6Q8IY17 1366 aa10.82□□□□□ -0.68
CPS1-208ENST00000497121 PHLPP1O60346 1717 aa10.82□□□□□ -0.68
CPS1-208ENST00000497121 DCAF11Q8TEB1 546 aa10.82□□□□□ -0.68
CPS1-208ENST00000497121 STAC3Q96MF2 364 aa10.82□□□□□ -0.68
CPS1-208ENST00000497121 ESCO1Q5FWF5 840 aa10.81□□□□□ -0.68
CPS1-208ENST00000497121 KDM2AQ9Y2K7 1162 aa10.81□□□□□ -0.68
CPS1-208ENST00000497121 NALCNQ8IZF0 1738 aa10.81□□□□□ -0.68
CPS1-208ENST00000497121 NUTM2FA1L443 756 aa10.8□□□□□ -0.68
CPS1-208ENST00000497121 NUTM2BA6NNL0 878 aaPredicted RBP10.8□□□□□ -0.68
CPS1-208ENST00000497121 NUTM2EB1AL46 878 aaPredicted RBP10.8□□□□□ -0.68
CPS1-208ENST00000497121 NUTM2AQ8IVF1 878 aaPredicted RBP10.8□□□□□ -0.68
CPS1-208ENST00000497121 PRAM1Q96QH2 718 aa10.8□□□□□ -0.68
CPS1-208ENST00000497121 IFT172Q9UG01 1749 aa10.79□□□□□ -0.68
CPS1-208ENST00000497121 FOXO3O43524 673 aa10.79□□□□□ -0.68
CPS1-208ENST00000497121 ADGRB1O14514 1584 aa10.78□□□□□ -0.68
CPS1-208ENST00000497121 CDC42BPGQ6DT37 1551 aa10.78□□□□□ -0.68
CPS1-208ENST00000497121 MEX3CQ5U5Q3 659 aaKnown RBP10.78□□□□□ -0.68
CPS1-208ENST00000497121 ZNF772Q68DY9 489 aaPredicted RBP10.78□□□□□ -0.68
CPS1-208ENST00000497121 XPCQ01831 940 aaPredicted RBP10.77□□□□□ -0.69
CPS1-208ENST00000497121 SAFB2Q14151 953 aaKnown RBP eCLIP10.77□□□□□ -0.69
CPS1-208ENST00000497121 TRAK1Q9UPV9 953 aa10.77□□□□□ -0.69
CPS1-208ENST00000497121 NPHP3Q7Z494 1330 aa10.77□□□□□ -0.69
CPS1-208ENST00000497121 LAMC1P11047 1609 aa10.76□□□□□ -0.69
CPS1-208ENST00000497121 NHSL1Q5SYE7 1610 aa10.76□□□□□ -0.69
CPS1-208ENST00000497121 AFF2P51816 1311 aa10.76□□□□□ -0.69
CPS1-208ENST00000497121 PXDNQ92626 1479 aa10.75□□□□□ -0.69
CPS1-208ENST00000497121 DLC1Q96QB1 1528 aa10.75□□□□□ -0.69
CPS1-208ENST00000497121 POGKQ9P215 609 aa10.75□□□□□ -0.69
CPS1-208ENST00000497121 SHPRHQ149N8 1683 aa10.75□□□□□ -0.69
CPS1-208ENST00000497121 ADAMTS2O95450 1211 aa10.74□□□□□ -0.69
CPS1-208ENST00000497121 NBPF1Q3BBV0 1214 aa10.74□□□□□ -0.69
CPS1-208ENST00000497121 KRT28Q7Z3Y7 464 aa10.74□□□□□ -0.69
CPS1-208ENST00000497121 C8orf37Q96NL8 207 aa10.74□□□□□ -0.69
CPS1-208ENST00000497121 PHF8Q9UPP1 1060 aa10.74□□□□□ -0.69
CPS1-208ENST00000497121 SPATA31A3Q5VYP0 1347 aa10.74□□□□□ -0.69
CPS1-208ENST00000497121 FNBP4Q8N3X1 1017 aaPredicted RBP10.73□□□□□ -0.69
CPS1-208ENST00000497121 HIRIP3Q9BW71 556 aaPredicted RBP10.73□□□□□ -0.69
CPS1-208ENST00000497121 PRR36Q9H6K5 1346 aa10.73□□□□□ -0.69
CPS1-208ENST00000497121 KNDC1Q76NI1 1749 aa10.72□□□□□ -0.69
CPS1-208ENST00000497121 WASLO00401 505 aaPredicted RBP10.72□□□□□ -0.69
CPS1-208ENST00000497121 RXRBP28702 533 aa10.72□□□□□ -0.69
CPS1-208ENST00000497121 NGLY1Q96IV0 654 aa10.72□□□□□ -0.69
CPS1-208ENST00000497121 SIN3AQ96ST3 1273 aa10.72□□□□□ -0.69
CPS1-208ENST00000497121 MINK1Q8N4C8 1332 aaPredicted RBP10.72□□□□□ -0.69
CPS1-208ENST00000497121 ANKARQ7Z5J8 1434 aa10.71□□□□□ -0.69
CPS1-208ENST00000497121 L3MBTL2Q969R5 705 aa10.71□□□□□ -0.69
CPS1-208ENST00000497121 QTRT2Q9H974 415 aaKnown RBP10.71□□□□□ -0.69
CPS1-208ENST00000497121 PMFBP1Q8TBY8 1022 aa10.7□□□□□ -0.7
CPS1-208ENST00000497121 SBNO1A3KN83 1393 aa10.69□□□□□ -0.7
CPS1-208ENST00000497121 RBM6P78332 1123 aaKnown RBP10.69□□□□□ -0.7
CPS1-208ENST00000497121 FMN2Q9NZ56 1722 aa10.68□□□□□ -0.7
CPS1-208ENST00000497121 PSME1Q06323 249 aa10.68□□□□□ -0.7
CPS1-208ENST00000497121 USP21Q9UK80 565 aa10.68□□□□□ -0.7
CPS1-208ENST00000497121 BCL9LQ86UU0 1499 aa10.68□□□□□ -0.7
CPS1-208ENST00000497121 CABLES1Q8TDN4 633 aa10.67□□□□□ -0.7
CPS1-208ENST00000497121 UPF1Q92900 1129 aaKnown RBP eCLIP10.67□□□□□ -0.7
CPS1-208ENST00000497121 NUDT16Q96DE0 195 aaKnown RBP10.67□□□□□ -0.7
CPS1-208ENST00000497121 CDK19Q9BWU1 502 aa10.67□□□□□ -0.7
CPS1-208ENST00000497121 ADGRB2O60241 1585 aa10.67□□□□□ -0.7
CPS1-208ENST00000497121 CDK12Q9NYV4 1490 aaPredicted RBP10.67□□□□□ -0.7
CPS1-208ENST00000497121 COL22A1Q8NFW1 1626 aaPredicted RBP10.66□□□□□ -0.7
CPS1-208ENST00000497121 TRPC5Q9UL62 973 aaPredicted RBP10.66□□□□□ -0.7
CPS1-208ENST00000497121 ATRNO75882 1429 aa10.66□□□□□ -0.7
CPS1-208ENST00000497121 TNS3Q68CZ2 1445 aa10.66□□□□□ -0.7
CPS1-208ENST00000497121 NEUROD1Q13562 356 aa10.65□□□□□ -0.7
CPS1-208ENST00000497121 RGS12O14924 1447 aa10.65□□□□□ -0.7
CPS1-208ENST00000497121 USP32Q8NFA0 1604 aa10.65□□□□□ -0.7
CPS1-208ENST00000497121 EIF3AQ14152 1382 aaKnown RBP10.65□□□□□ -0.71
CPS1-208ENST00000497121 TULP4Q9NRJ4 1543 aa10.64□□□□□ -0.71
CPS1-208ENST00000497121 PLEKHG3A1L390 1219 aa10.64□□□□□ -0.71
CPS1-208ENST00000497121 NBPF8Q3BBV2 869 aa10.64□□□□□ -0.71
CPS1-208ENST00000497121 UNC5CLQ8IV45 518 aa10.64□□□□□ -0.71
CPS1-208ENST00000497121 ARHGEF10O15013 1369 aa10.64□□□□□ -0.71
CPS1-208ENST00000497121 SLIT2O94813 1529 aa10.63□□□□□ -0.71
CPS1-208ENST00000497121 FAM83GA6ND36 823 aa10.63□□□□□ -0.71
CPS1-208ENST00000497121 NGDNQ8NEJ9 315 aaKnown RBP10.63□□□□□ -0.71
CPS1-208ENST00000497121 CCDC61Q9Y6R9 512 aa10.63□□□□□ -0.71
CPS1-208ENST00000497121 GPRASP1Q5JY77 1395 aa10.63□□□□□ -0.71
CPS1-208ENST00000497121 ATP7BP35670 1465 aa10.62□□□□□ -0.71
CPS1-208ENST00000497121 CENPJQ9HC77 1338 aaPredicted RBP10.62□□□□□ -0.71
CPS1-208ENST00000497121 TRIM26Q12899 539 aaPredicted RBP10.62□□□□□ -0.71
CPS1-208ENST00000497121 LMOD2Q6P5Q4 547 aa10.62□□□□□ -0.71
CPS1-208ENST00000497121 GJD4Q96KN9 370 aaPredicted RBP10.62□□□□□ -0.71
CPS1-208ENST00000497121 KIF1AQ12756 1690 aa10.62□□□□□ -0.71
CPS1-208ENST00000497121 POLR3AO14802 1390 aaPredicted RBP10.61□□□□□ -0.71
CPS1-208ENST00000497121 ACEP12821 1306 aa10.6□□□□□ -0.71
CPS1-208ENST00000497121 PLEKHG5O94827 1062 aa10.6□□□□□ -0.71
CPS1-208ENST00000497121 CABP2Q9NPB3 220 aa10.6□□□□□ -0.71
CPS1-208ENST00000497121 ONECUT3O60422 494 aaPredicted RBP10.59□□□□□ -0.71
CPS1-208ENST00000497121 VPS72Q15906 364 aa10.59□□□□□ -0.71
CPS1-208ENST00000497121 KIAA1210Q9ULL0 1709 aa10.58□□□□□ -0.72
CPS1-208ENST00000497121 PAK3O75914 559 aaPredicted RBP10.58□□□□□ -0.72
CPS1-208ENST00000497121 ARHGEF28Q8N1W1 1705 aaKnown RBP10.58□□□□□ -0.72
CPS1-208ENST00000497121 RALGAPBQ86X10 1494 aa10.57□□□□□ -0.72
CPS1-208ENST00000497121 HAP1P54257 671 aaPredicted RBP10.57□□□□□ -0.72
CPS1-208ENST00000497121 SRPK2P78362 688 aaKnown RBP10.57□□□□□ -0.72
CPS1-208ENST00000497121 CABP1Q9NZU7 370 aa10.57□□□□□ -0.72
CPS1-208ENST00000497121 ROCK2O75116 1388 aaKnown RBP10.56□□□□□ -0.72
CPS1-208ENST00000497121 BTG4Q9NY30 223 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms