RNA–Protein interactions for RNA: ENST00000497091.1

PBX3-211, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 425 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-211ENST00000497091 ADGRL3Q9HAR2 1447 aa27.24■■□□□ 1.95
PBX3-211ENST00000497091 PLEKHH1Q9ULM0 1364 aa27.23■■□□□ 1.95
PBX3-211ENST00000497091 SAFB2Q14151 953 aaKnown RBP eCLIP27.23■■□□□ 1.95
PBX3-211ENST00000497091 DCCP43146 1447 aa27.21■■□□□ 1.95
PBX3-211ENST00000497091 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.18■■□□□ 1.94
PBX3-211ENST00000497091 DLC1Q96QB1 1528 aa27.17■■□□□ 1.94
PBX3-211ENST00000497091 ROCK2O75116 1388 aaKnown RBP27.17■■□□□ 1.94
PBX3-211ENST00000497091 KIAA1210Q9ULL0 1709 aa27.16■■□□□ 1.94
PBX3-211ENST00000497091 KNDC1Q76NI1 1749 aa27.15■■□□□ 1.94
PBX3-211ENST00000497091 MINK1Q8N4C8 1332 aaPredicted RBP27.12■■□□□ 1.93
PBX3-211ENST00000497091 CARD11Q9BXL7 1154 aa27.11■■□□□ 1.93
PBX3-211ENST00000497091 MST1RQ04912 1400 aa27.1■■□□□ 1.93
PBX3-211ENST00000497091 NUTM2FA1L443 756 aa27.1■■□□□ 1.93
PBX3-211ENST00000497091 BRINP3Q76B58 766 aa27.1■■□□□ 1.93
PBX3-211ENST00000497091 HIRIP3Q9BW71 556 aaPredicted RBP27.1■■□□□ 1.93
PBX3-211ENST00000497091 NALCNQ8IZF0 1738 aa27.09■■□□□ 1.93
PBX3-211ENST00000497091 MED1Q15648 1581 aaPredicted RBP27.09■■□□□ 1.93
PBX3-211ENST00000497091 TRPM1Q7Z4N2 1603 aa27.07■■□□□ 1.92
PBX3-211ENST00000497091 ESCO1Q5FWF5 840 aa27.06■■□□□ 1.92
PBX3-211ENST00000497091 ORAI2Q96SN7 254 aa27.06■■□□□ 1.92
PBX3-211ENST00000497091 CENPJQ9HC77 1338 aaPredicted RBP27.06■■□□□ 1.92
PBX3-211ENST00000497091 GPRASP1Q5JY77 1395 aa27.06■■□□□ 1.92
PBX3-211ENST00000497091 C1orf167Q5SNV9 1468 aa27.06■■□□□ 1.92
PBX3-211ENST00000497091 WASLO00401 505 aaPredicted RBP27.04■■□□□ 1.92
PBX3-211ENST00000497091 CDC42BPGQ6DT37 1551 aa27.02■■□□□ 1.92
PBX3-211ENST00000497091 RALGAPBQ86X10 1494 aa27.02■■□□□ 1.92
PBX3-211ENST00000497091 ROBO1Q9Y6N7 1651 aa27.01■■□□□ 1.92
PBX3-211ENST00000497091 EIF3AQ14152 1382 aaKnown RBP27■■□□□ 1.91
PBX3-211ENST00000497091 CDK19Q9BWU1 502 aa26.99■■□□□ 1.91
PBX3-211ENST00000497091 ARHGEF28Q8N1W1 1705 aaKnown RBP26.96■■□□□ 1.91
PBX3-211ENST00000497091 DDX17Q92841 729 aaKnown RBP26.96■■□□□ 1.91
PBX3-211ENST00000497091 PHF23Q9BUL5 403 aaPredicted RBP26.94■■□□□ 1.9
PBX3-211ENST00000497091 FOXO3O43524 673 aa26.93■■□□□ 1.9
PBX3-211ENST00000497091 PHF8Q9UPP1 1060 aa26.93■■□□□ 1.9
PBX3-211ENST00000497091 NUDT16Q96DE0 195 aaKnown RBP26.92■■□□□ 1.9
PBX3-211ENST00000497091 ANKARQ7Z5J8 1434 aa26.91■■□□□ 1.9
PBX3-211ENST00000497091 SRPK2P78362 688 aaKnown RBP26.91■■□□□ 1.9
PBX3-211ENST00000497091 ADGRB2O60241 1585 aa26.91■■□□□ 1.9
PBX3-211ENST00000497091 LRRC59Q96AG4 307 aaKnown RBP26.9■■□□□ 1.9
PBX3-211ENST00000497091 NPHP3Q7Z494 1330 aa26.9■■□□□ 1.9
PBX3-211ENST00000497091 EVC2Q86UK5 1308 aa26.9■■□□□ 1.9
PBX3-211ENST00000497091 PRR36Q9H6K5 1346 aa26.9■■□□□ 1.9
PBX3-211ENST00000497091 PMFBP1Q8TBY8 1022 aa26.89■■□□□ 1.9
PBX3-211ENST00000497091 FMN2Q9NZ56 1722 aa26.89■■□□□ 1.9
PBX3-211ENST00000497091 ST20-MTHFSA0A0A6YYL1 179 aa26.88■■□□□ 1.89
PBX3-211ENST00000497091 CABP2Q9NPB3 220 aa26.88■■□□□ 1.89
PBX3-211ENST00000497091 CCDC61Q9Y6R9 512 aa26.87■■□□□ 1.89
PBX3-211ENST00000497091 AHDC1Q5TGY3 1603 aaPredicted RBP26.86■■□□□ 1.89
PBX3-211ENST00000497091 SOS2Q07890 1332 aaPredicted RBP26.86■■□□□ 1.89
PBX3-211ENST00000497091 PSME1Q06323 249 aa26.85■■□□□ 1.89
PBX3-211ENST00000497091 TULP4Q9NRJ4 1543 aa26.85■■□□□ 1.89
PBX3-211ENST00000497091 SLC24A1O60721 1099 aa26.84■■□□□ 1.89
PBX3-211ENST00000497091 XPCQ01831 940 aaPredicted RBP26.84■■□□□ 1.89
PBX3-211ENST00000497091 KRT28Q7Z3Y7 464 aa26.84■■□□□ 1.89
PBX3-211ENST00000497091 PHLPP1O60346 1717 aa26.84■■□□□ 1.89
PBX3-211ENST00000497091 JCADQ9P266 1359 aa26.84■■□□□ 1.89
PBX3-211ENST00000497091 NGDNQ8NEJ9 315 aaKnown RBP26.83■■□□□ 1.89
PBX3-211ENST00000497091 USP47Q96K76 1375 aa26.82■■□□□ 1.88
PBX3-211ENST00000497091 SBNO2Q9Y2G9 1366 aa26.81■■□□□ 1.88
PBX3-211ENST00000497091 QRICH2Q9H0J4 1663 aa26.8■■□□□ 1.88
PBX3-211ENST00000497091 TESK2Q96S53 571 aa26.79■■□□□ 1.88
PBX3-211ENST00000497091 PLEKHG3A1L390 1219 aa26.78■■□□□ 1.88
PBX3-211ENST00000497091 COL16A1Q07092 1604 aaPredicted RBP26.78■■□□□ 1.88
PBX3-211ENST00000497091 NHSL1Q5SYE7 1610 aa26.77■■□□□ 1.88
PBX3-211ENST00000497091 ATP7BP35670 1465 aa26.77■■□□□ 1.88
PBX3-211ENST00000497091 USP32Q8NFA0 1604 aa26.76■■□□□ 1.87
PBX3-211ENST00000497091 CABP1Q9NZU7 370 aa26.76■■□□□ 1.87
PBX3-211ENST00000497091 RGS17Q9UGC6 210 aaPredicted RBP26.75■■□□□ 1.87
PBX3-211ENST00000497091 ACEP12821 1306 aa26.74■■□□□ 1.87
PBX3-211ENST00000497091 EIF4G2P78344 907 aaKnown RBP eCLIP26.74■■□□□ 1.87
PBX3-211ENST00000497091 RGPD8O14715 1765 aaPredicted RBP26.74■■□□□ 1.87
PBX3-211ENST00000497091 SPATA31A6Q5VVP1 1343 aa26.73■■□□□ 1.87
PBX3-211ENST00000497091 PXDNQ92626 1479 aa26.73■■□□□ 1.87
PBX3-211ENST00000497091 KIF1AQ12756 1690 aa26.73■■□□□ 1.87
PBX3-211ENST00000497091 TMF1P82094 1093 aa26.72■■□□□ 1.87
PBX3-211ENST00000497091 PUS7Q96PZ0 661 aaKnown RBP26.72■■□□□ 1.87
PBX3-211ENST00000497091 PPIP5K1Q6PFW1 1433 aa26.72■■□□□ 1.87
PBX3-211ENST00000497091 SPATA31A3Q5VYP0 1347 aa26.71■■□□□ 1.87
PBX3-211ENST00000497091 ATAD2Q6PL18 1390 aa26.71■■□□□ 1.87
PBX3-211ENST00000497091 NUTM2BA6NNL0 878 aaPredicted RBP26.7■■□□□ 1.86
PBX3-211ENST00000497091 NUTM2EB1AL46 878 aaPredicted RBP26.7■■□□□ 1.86
PBX3-211ENST00000497091 LMOD2Q6P5Q4 547 aa26.7■■□□□ 1.86
PBX3-211ENST00000497091 NUTM2AQ8IVF1 878 aaPredicted RBP26.7■■□□□ 1.86
PBX3-211ENST00000497091 PNPLA6Q8IY17 1366 aa26.7■■□□□ 1.86
PBX3-211ENST00000497091 PAK3O75914 559 aaPredicted RBP26.68■■□□□ 1.86
PBX3-211ENST00000497091 HSPA5P11021 654 aaKnown RBP26.68■■□□□ 1.86
PBX3-211ENST00000497091 SBNO1A3KN83 1393 aa26.68■■□□□ 1.86
PBX3-211ENST00000497091 POLR3AO14802 1390 aaPredicted RBP26.68■■□□□ 1.86
PBX3-211ENST00000497091 TMC1Q8TDI8 760 aa26.67■■□□□ 1.86
PBX3-211ENST00000497091 CDCA8Q53HL2 280 aa26.66■■□□□ 1.86
PBX3-211ENST00000497091 ZNF692Q9BU19 519 aaPredicted RBP26.65■■□□□ 1.86
PBX3-211ENST00000497091 MEX3CQ5U5Q3 659 aaKnown RBP26.63■■□□□ 1.85
PBX3-211ENST00000497091 SLC12A5Q9H2X9 1139 aa26.62■■□□□ 1.85
PBX3-211ENST00000497091 ITSN1Q15811 1721 aa26.62■■□□□ 1.85
PBX3-211ENST00000497091 TNS3Q68CZ2 1445 aa26.61■■□□□ 1.85
PBX3-211ENST00000497091 ARHGEF10O15013 1369 aa26.6■■□□□ 1.85
PBX3-211ENST00000497091 SHPRHQ149N8 1683 aa26.6■■□□□ 1.85
PBX3-211ENST00000497091 PLEKHG5O94827 1062 aa26.59■■□□□ 1.85
PBX3-211ENST00000497091 TOPAZ1Q8N9V7 1692 aa26.58■■□□□ 1.85
PBX3-211ENST00000497091 ADAMTS2O95450 1211 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms