RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 C6orf229H3BNL8 230 aa4.88□□□□□ -1.63
SNRNP48-202ENST00000496946 ATP6V1AP38606 617 aa4.88□□□□□ -1.63
SNRNP48-202ENST00000496946 FAM160A2Q8N612 972 aaPredicted RBP4.88□□□□□ -1.63
SNRNP48-202ENST00000496946 RNF223E7ERA6 249 aa4.88□□□□□ -1.63
SNRNP48-202ENST00000496946 SPSB2Q99619 263 aa4.88□□□□□ -1.63
SNRNP48-202ENST00000496946 PER1O15534 1290 aaPredicted RBP4.87□□□□□ -1.63
SNRNP48-202ENST00000496946 ITGBL1O95965 494 aaPredicted RBP4.87□□□□□ -1.63
SNRNP48-202ENST00000496946 NUTM1Q86Y26 1132 aa4.87□□□□□ -1.63
SNRNP48-202ENST00000496946 THAP11Q96EK4 314 aa4.87□□□□□ -1.63
SNRNP48-202ENST00000496946 FDX1P10109 184 aa4.86□□□□□ -1.63
SNRNP48-202ENST00000496946 NPM2Q86SE8 214 aaKnown RBP4.86□□□□□ -1.63
SNRNP48-202ENST00000496946 FCF1Q9Y324 198 aaKnown RBP4.86□□□□□ -1.63
SNRNP48-202ENST00000496946 CFAP99D6REC4 459 aa4.86□□□□□ -1.63
SNRNP48-202ENST00000496946 SLC4A3P48751 1232 aa4.86□□□□□ -1.63
SNRNP48-202ENST00000496946 KMT5BQ4FZB7 885 aa4.86□□□□□ -1.63
SNRNP48-202ENST00000496946 IL21Q9HBE4 155 aa4.85□□□□□ -1.63
SNRNP48-202ENST00000496946 HRCP23327 699 aa4.85□□□□□ -1.63
SNRNP48-202ENST00000496946 RTL5Q5HYW3 569 aaPredicted RBP4.84□□□□□ -1.63
SNRNP48-202ENST00000496946 TNFRSF10AO00220 468 aa4.83□□□□□ -1.64
SNRNP48-202ENST00000496946 RSBN1LQ6PCB5 846 aaPredicted RBP4.83□□□□□ -1.64
SNRNP48-202ENST00000496946 BRICD5Q6PL45 260 aa4.83□□□□□ -1.64
SNRNP48-202ENST00000496946 EPS8L1Q8TE68 723 aa4.83□□□□□ -1.64
SNRNP48-202ENST00000496946 C14orf37Q86TY3 774 aa4.83□□□□□ -1.64
SNRNP48-202ENST00000496946 CCDC24Q8N4L8 307 aa4.83□□□□□ -1.64
SNRNP48-202ENST00000496946 PRKD2Q9BZL6 878 aa4.83□□□□□ -1.64
SNRNP48-202ENST00000496946 MAP10Q9P2G4 905 aa4.83□□□□□ -1.64
SNRNP48-202ENST00000496946 NYAP1Q6ZVC0 841 aa4.82□□□□□ -1.64
SNRNP48-202ENST00000496946 RIC3Q7Z5B4 369 aa4.82□□□□□ -1.64
SNRNP48-202ENST00000496946 PTCRAQ6ISU1 281 aaPredicted RBP4.82□□□□□ -1.64
SNRNP48-202ENST00000496946 HMX1Q9NP08 348 aaPredicted RBP4.82□□□□□ -1.64
SNRNP48-202ENST00000496946 A0A0G2JS52 829 aa4.81□□□□□ -1.64
SNRNP48-202ENST00000496946 LRRN4Q8WUT4 740 aa4.81□□□□□ -1.64
SNRNP48-202ENST00000496946 USB1Q9BQ65 265 aaKnown RBP4.81□□□□□ -1.64
SNRNP48-202ENST00000496946 SLC6A16Q9GZN6 736 aa4.81□□□□□ -1.64
SNRNP48-202ENST00000496946 NUTM2BA6NNL0 878 aaPredicted RBP4.81□□□□□ -1.64
SNRNP48-202ENST00000496946 NUTM2EB1AL46 878 aaPredicted RBP4.81□□□□□ -1.64
SNRNP48-202ENST00000496946 ADH1BP00325 375 aa4.81□□□□□ -1.64
SNRNP48-202ENST00000496946 CLK2P49760 499 aaKnown RBP4.81□□□□□ -1.64
SNRNP48-202ENST00000496946 CTDSPL2Q05D32 466 aa4.81□□□□□ -1.64
SNRNP48-202ENST00000496946 NUTM2DQ5VT03 806 aaPredicted RBP4.81□□□□□ -1.64
SNRNP48-202ENST00000496946 LIAT1Q6ZQX7 453 aa4.81□□□□□ -1.64
SNRNP48-202ENST00000496946 NUTM2AQ8IVF1 878 aaPredicted RBP4.81□□□□□ -1.64
SNRNP48-202ENST00000496946 PRR7Q8TB68 274 aa4.81□□□□□ -1.64
SNRNP48-202ENST00000496946 NR1I2O75469 434 aa4.8□□□□□ -1.64
SNRNP48-202ENST00000496946 TMEM132AQ24JP5 1023 aa4.8□□□□□ -1.64
SNRNP48-202ENST00000496946 RSPH4AQ5TD94 716 aa4.8□□□□□ -1.64
SNRNP48-202ENST00000496946 MTMR2Q13614 643 aa4.8□□□□□ -1.64
SNRNP48-202ENST00000496946 FMNL1O95466 1100 aaPredicted RBP4.79□□□□□ -1.64
SNRNP48-202ENST00000496946 LINC01559Q495D7 138 aa4.79□□□□□ -1.64
SNRNP48-202ENST00000496946 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.79□□□□□ -1.64
SNRNP48-202ENST00000496946 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.79□□□□□ -1.64
SNRNP48-202ENST00000496946 TRIM67Q6ZTA4 783 aa4.78□□□□□ -1.64
SNRNP48-202ENST00000496946 FOXC1Q12948 553 aa4.78□□□□□ -1.64
SNRNP48-202ENST00000496946 PRR14Q9BWN1 585 aa4.78□□□□□ -1.64
SNRNP48-202ENST00000496946 RETREG3Q86VR2 466 aa4.77□□□□□ -1.65
SNRNP48-202ENST00000496946 UBE2Q2Q8WVN8 375 aa4.77□□□□□ -1.65
SNRNP48-202ENST00000496946 LCE2BO14633 110 aa4.76□□□□□ -1.65
SNRNP48-202ENST00000496946 SPTLC1O15269 473 aa4.76□□□□□ -1.65
SNRNP48-202ENST00000496946 AP1G2O75843 785 aa4.76□□□□□ -1.65
SNRNP48-202ENST00000496946 DDRGK1Q96HY6 314 aa4.76□□□□□ -1.65
SNRNP48-202ENST00000496946 NUDT12Q9BQG2 462 aa4.76□□□□□ -1.65
SNRNP48-202ENST00000496946 LILRB3O75022 631 aa4.76□□□□□ -1.65
SNRNP48-202ENST00000496946 CTHP32929 405 aa4.76□□□□□ -1.65
SNRNP48-202ENST00000496946 GRIPAP1Q4V328 841 aa4.76□□□□□ -1.65
SNRNP48-202ENST00000496946 SKOR1P84550 965 aa4.76□□□□□ -1.65
SNRNP48-202ENST00000496946 SUPT5HO00267 1087 aaKnown RBP4.75□□□□□ -1.65
SNRNP48-202ENST00000496946 TRIM32Q13049 653 aa4.75□□□□□ -1.65
SNRNP48-202ENST00000496946 NR6A1Q15406 480 aa4.75□□□□□ -1.65
SNRNP48-202ENST00000496946 DXOO77932 396 aaKnown RBP4.75□□□□□ -1.65
SNRNP48-202ENST00000496946 SLC19A1P41440 591 aa4.75□□□□□ -1.65
SNRNP48-202ENST00000496946 USP46P62068 366 aa4.75□□□□□ -1.65
SNRNP48-202ENST00000496946 ZBTB3Q9H5J0 574 aa4.75□□□□□ -1.65
SNRNP48-202ENST00000496946 SNRKQ9NRH2 765 aa4.75□□□□□ -1.65
SNRNP48-202ENST00000496946 PDIA4P13667 645 aaKnown RBP4.74□□□□□ -1.65
SNRNP48-202ENST00000496946 RFC5P40937 340 aa4.74□□□□□ -1.65
SNRNP48-202ENST00000496946 TRIM26Q12899 539 aaPredicted RBP4.74□□□□□ -1.65
SNRNP48-202ENST00000496946 SKIV2LQ15477 1246 aaKnown RBP4.74□□□□□ -1.65
SNRNP48-202ENST00000496946 SH3D19Q5HYK7 790 aa4.74□□□□□ -1.65
SNRNP48-202ENST00000496946 SPRYD7Q5W111 196 aa4.74□□□□□ -1.65
SNRNP48-202ENST00000496946 NECTIN2Q92692 538 aa4.74□□□□□ -1.65
SNRNP48-202ENST00000496946 TLL2Q9Y6L7 1015 aa4.74□□□□□ -1.65
SNRNP48-202ENST00000496946 MMP16P51512 607 aa4.73□□□□□ -1.65
SNRNP48-202ENST00000496946 ZNF697Q5TEC3 545 aa4.73□□□□□ -1.65
SNRNP48-202ENST00000496946 ANKLE1Q8NAG6 615 aa4.73□□□□□ -1.65
SNRNP48-202ENST00000496946 CARD14Q9BXL6 1004 aa4.73□□□□□ -1.65
SNRNP48-202ENST00000496946 UNC93B1Q9H1C4 597 aa4.73□□□□□ -1.65
SNRNP48-202ENST00000496946 MAGEB6P1A0A0J9YX57 407 aa4.73□□□□□ -1.65
SNRNP48-202ENST00000496946 C4orf48Q5BLP8 95 aa4.73□□□□□ -1.65
SNRNP48-202ENST00000496946 BAP1Q92560 729 aa4.73□□□□□ -1.65
SNRNP48-202ENST00000496946 CENPBP07199 599 aaPredicted RBP4.72□□□□□ -1.65
SNRNP48-202ENST00000496946 Q3C1V9 767 aa4.72□□□□□ -1.65
SNRNP48-202ENST00000496946 SALL2Q9Y467 1007 aaPredicted RBP4.72□□□□□ -1.65
SNRNP48-202ENST00000496946 CCNYL3P0C7X3 344 aa4.72□□□□□ -1.65
SNRNP48-202ENST00000496946 JUNDP17535 347 aa4.72□□□□□ -1.65
SNRNP48-202ENST00000496946 MSS51Q4VC12 460 aa4.72□□□□□ -1.65
SNRNP48-202ENST00000496946 MRGPRX2Q96LB1 330 aa4.72□□□□□ -1.65
SNRNP48-202ENST00000496946 J3QL48 77 aa4.71□□□□□ -1.66
SNRNP48-202ENST00000496946 USP17L8P0C7I0 530 aa4.71□□□□□ -1.66
SNRNP48-202ENST00000496946 FOXJ1Q92949 421 aa4.71□□□□□ -1.66
SNRNP48-202ENST00000496946 PDZRN3Q9UPQ7 1066 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms