RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 MROH1Q8NDA8 1641 aa8.9□□□□□ -0.99
HMGCL-206ENST00000496907 COL16A1Q07092 1604 aaPredicted RBP8.88□□□□□ -0.99
HMGCL-206ENST00000496907 SPATA31A6Q5VVP1 1343 aa8.88□□□□□ -0.99
HMGCL-206ENST00000496907 UNC13BO14795 1591 aa8.88□□□□□ -0.99
HMGCL-206ENST00000496907 KCNA6P17658 529 aa8.88□□□□□ -0.99
HMGCL-206ENST00000496907 RBM6P78332 1123 aaKnown RBP8.88□□□□□ -0.99
HMGCL-206ENST00000496907 BCANQ96GW7 911 aa8.88□□□□□ -0.99
HMGCL-206ENST00000496907 SLC26A8Q96RN1 970 aa8.88□□□□□ -0.99
HMGCL-206ENST00000496907 NKTRP30414 1462 aaKnown RBP8.88□□□□□ -0.99
HMGCL-206ENST00000496907 GCC2Q8IWJ2 1684 aa8.88□□□□□ -0.99
HMGCL-206ENST00000496907 TMEM2Q9UHN6 1383 aa8.87□□□□□ -0.99
HMGCL-206ENST00000496907 EFCAB6Q5THR3 1501 aa8.87□□□□□ -0.99
HMGCL-206ENST00000496907 STAC3Q96MF2 364 aa8.87□□□□□ -0.99
HMGCL-206ENST00000496907 PCGF6Q9BYE7 350 aa8.87□□□□□ -0.99
HMGCL-206ENST00000496907 SLAIN2Q9P270 581 aa8.87□□□□□ -0.99
HMGCL-206ENST00000496907 CEP350Q5VT06 3117 aa8.87□□□□□ -0.99
HMGCL-206ENST00000496907 IDI1Q13907 227 aa8.86□□□□□ -0.99
HMGCL-206ENST00000496907 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.86□□□□□ -0.99
HMGCL-206ENST00000496907 C8orf37Q96NL8 207 aa8.86□□□□□ -0.99
HMGCL-206ENST00000496907 NOS1P29475 1434 aa8.86□□□□□ -0.99
HMGCL-206ENST00000496907 NWD1Q149M9 1564 aa8.86□□□□□ -0.99
HMGCL-206ENST00000496907 KDM5AP29375 1690 aaKnown RBP8.85□□□□□ -0.99
HMGCL-206ENST00000496907 IQGAP3Q86VI3 1631 aa8.85□□□□□ -0.99
HMGCL-206ENST00000496907 POTEJP0CG39 1038 aa8.85□□□□□ -0.99
HMGCL-206ENST00000496907 DEFB132Q7Z7B7 95 aa8.85□□□□□ -0.99
HMGCL-206ENST00000496907 C14orf37Q86TY3 774 aa8.85□□□□□ -0.99
HMGCL-206ENST00000496907 CDAN1Q8IWY9 1227 aa8.85□□□□□ -0.99
HMGCL-206ENST00000496907 TET3O43151 1660 aa8.85□□□□□ -0.99
HMGCL-206ENST00000496907 SHPRHQ149N8 1683 aa8.85□□□□□ -0.99
HMGCL-206ENST00000496907 RPGRIP1LQ68CZ1 1315 aa8.84□□□□□ -0.99
HMGCL-206ENST00000496907 CLSPNQ9HAW4 1339 aa8.83□□□□□ -1
HMGCL-206ENST00000496907 GALR2O43603 387 aaPredicted RBP8.83□□□□□ -1
HMGCL-206ENST00000496907 VGFO15240 615 aaPredicted RBP8.82□□□□□ -1
HMGCL-206ENST00000496907 CCDC144AA2RUR9 1427 aa8.81□□□□□ -1
HMGCL-206ENST00000496907 ADGRB3O60242 1522 aa8.81□□□□□ -1
HMGCL-206ENST00000496907 AHDC1Q5TGY3 1603 aaPredicted RBP8.81□□□□□ -1
HMGCL-206ENST00000496907 CHGAP10645 457 aaKnown RBP8.81□□□□□ -1
HMGCL-206ENST00000496907 ZNF579Q8NAF0 562 aaKnown RBP8.81□□□□□ -1
HMGCL-206ENST00000496907 CHD2O14647 1828 aaKnown RBP8.81□□□□□ -1
HMGCL-206ENST00000496907 PPP1R15AO75807 674 aaPredicted RBP8.8□□□□□ -1
HMGCL-206ENST00000496907 C1QTNF8P60827 252 aa8.8□□□□□ -1
HMGCL-206ENST00000496907 ZNF326Q5BKZ1 582 aaKnown RBP8.8□□□□□ -1
HMGCL-206ENST00000496907 CCDC125Q86Z20 511 aa8.8□□□□□ -1
HMGCL-206ENST00000496907 NGLY1Q96IV0 654 aa8.8□□□□□ -1
HMGCL-206ENST00000496907 TIMELESSQ9UNS1 1208 aa8.8□□□□□ -1
HMGCL-206ENST00000496907 FARP1Q9Y4F1 1045 aaPredicted RBP8.8□□□□□ -1
HMGCL-206ENST00000496907 ANKRD30BQ9BXX2 1392 aa8.8□□□□□ -1
HMGCL-206ENST00000496907 ATF3P18847 181 aa8.79□□□□□ -1
HMGCL-206ENST00000496907 PELP1Q8IZL8 1130 aaKnown RBP8.79□□□□□ -1
HMGCL-206ENST00000496907 ZNF784Q8NCA9 323 aaPredicted RBP8.79□□□□□ -1
HMGCL-206ENST00000496907 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.79□□□□□ -1
HMGCL-206ENST00000496907 NHSL1Q5SYE7 1610 aa8.79□□□□□ -1
HMGCL-206ENST00000496907 CADPS2Q86UW7 1296 aa8.78□□□□□ -1
HMGCL-206ENST00000496907 DIP2AQ14689 1571 aa8.78□□□□□ -1
HMGCL-206ENST00000496907 MYO5BQ9ULV0 1848 aa8.77□□□□□ -1
HMGCL-206ENST00000496907 TRPM2O94759 1503 aa8.77□□□□□ -1.01
HMGCL-206ENST00000496907 PRR29P0C7W0 189 aa8.77□□□□□ -1.01
HMGCL-206ENST00000496907 MMRN1Q13201 1228 aa8.77□□□□□ -1.01
HMGCL-206ENST00000496907 DHX57Q6P158 1386 aaKnown RBP8.76□□□□□ -1.01
HMGCL-206ENST00000496907 PLEKHG1Q9ULL1 1385 aa8.76□□□□□ -1.01
HMGCL-206ENST00000496907 E9PCH4 1651 aa8.76□□□□□ -1.01
HMGCL-206ENST00000496907 ADAMTS2O95450 1211 aa8.76□□□□□ -1.01
HMGCL-206ENST00000496907 NCOA3Q9Y6Q9 1424 aa8.75□□□□□ -1.01
HMGCL-206ENST00000496907 RGL3Q3MIN7 710 aa8.75□□□□□ -1.01
HMGCL-206ENST00000496907 C19orf44Q9H6X5 657 aa8.75□□□□□ -1.01
HMGCL-206ENST00000496907 TBX22Q9Y458 520 aa8.75□□□□□ -1.01
HMGCL-206ENST00000496907 ASXL1Q8IXJ9 1541 aa8.75□□□□□ -1.01
HMGCL-206ENST00000496907 ZFYVE9O95405 1425 aa8.74□□□□□ -1.01
HMGCL-206ENST00000496907 RIMS2Q9UQ26 1411 aa8.74□□□□□ -1.01
HMGCL-206ENST00000496907 BRINP3Q76B58 766 aa8.74□□□□□ -1.01
HMGCL-206ENST00000496907 CCER1Q8TC90 406 aaPredicted RBP8.74□□□□□ -1.01
HMGCL-206ENST00000496907 BCL9LQ86UU0 1499 aa8.74□□□□□ -1.01
HMGCL-206ENST00000496907 BLMP54132 1417 aaPredicted RBP8.73□□□□□ -1.01
HMGCL-206ENST00000496907 MKRN4PQ13434 485 aaPredicted RBP8.73□□□□□ -1.01
HMGCL-206ENST00000496907 R3HDM1Q15032 1099 aaKnown RBP8.73□□□□□ -1.01
HMGCL-206ENST00000496907 SF3B2Q13435 895 aaKnown RBP8.72□□□□□ -1.01
HMGCL-206ENST00000496907 DCAF11Q8TEB1 546 aa8.72□□□□□ -1.01
HMGCL-206ENST00000496907 USP21Q9UK80 565 aa8.72□□□□□ -1.01
HMGCL-206ENST00000496907 SPHKAPQ2M3C7 1700 aa8.71□□□□□ -1.01
HMGCL-206ENST00000496907 SLC34A2O95436 690 aa8.71□□□□□ -1.02
HMGCL-206ENST00000496907 NEUROD1Q13562 356 aa8.71□□□□□ -1.02
HMGCL-206ENST00000496907 LRRC59Q96AG4 307 aaKnown RBP8.71□□□□□ -1.02
HMGCL-206ENST00000496907 TMEM131LA2VDJ0 1609 aa8.71□□□□□ -1.02
HMGCL-206ENST00000496907 PIK3R4Q99570 1358 aa8.71□□□□□ -1.02
HMGCL-206ENST00000496907 SPATA31E1Q6ZUB1 1445 aa8.71□□□□□ -1.02
HMGCL-206ENST00000496907 MAMSTRQ6ZN01 415 aa8.7□□□□□ -1.02
HMGCL-206ENST00000496907 TRPC5Q9UL62 973 aaPredicted RBP8.7□□□□□ -1.02
HMGCL-206ENST00000496907 SSUH2Q9Y2M2 353 aa8.7□□□□□ -1.02
HMGCL-206ENST00000496907 PNPLA6Q8IY17 1366 aa8.7□□□□□ -1.02
HMGCL-206ENST00000496907 DCCP43146 1447 aa8.7□□□□□ -1.02
HMGCL-206ENST00000496907 ADAMTS13Q76LX8 1427 aa8.7□□□□□ -1.02
HMGCL-206ENST00000496907 DDX17Q92841 729 aaKnown RBP8.69□□□□□ -1.02
HMGCL-206ENST00000496907 AMOTL2Q9Y2J4 779 aa8.69□□□□□ -1.02
HMGCL-206ENST00000496907 TONSLQ96HA7 1378 aa8.69□□□□□ -1.02
HMGCL-206ENST00000496907 L3MBTL2Q969R5 705 aa8.68□□□□□ -1.02
HMGCL-206ENST00000496907 SIRT1Q96EB6 747 aa8.68□□□□□ -1.02
HMGCL-206ENST00000496907 SIN3AQ96ST3 1273 aa8.68□□□□□ -1.02
HMGCL-206ENST00000496907 C14orf93Q9H972 538 aaKnown RBP8.68□□□□□ -1.02
HMGCL-206ENST00000496907 KDM2AQ9Y2K7 1162 aa8.68□□□□□ -1.02
HMGCL-206ENST00000496907 MST1RQ04912 1400 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms