RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 LMTK2Q8IWU2 1503 aa11.6□□□□□ -0.55
HPS4-217ENST00000496385 ERVK-7P63135 1459 aa11.6□□□□□ -0.55
HPS4-217ENST00000496385 CHGAP10645 457 aaKnown RBP11.6□□□□□ -0.55
HPS4-217ENST00000496385 PREX1Q8TCU6 1659 aa11.59□□□□□ -0.55
HPS4-217ENST00000496385 SMAP1Q8IYB5 467 aaPredicted RBP11.59□□□□□ -0.55
HPS4-217ENST00000496385 ANKRD30BQ9BXX2 1392 aa11.59□□□□□ -0.55
HPS4-217ENST00000496385 CCDC144AA2RUR9 1427 aa11.58□□□□□ -0.55
HPS4-217ENST00000496385 NCLP19338 710 aaKnown RBP11.58□□□□□ -0.56
HPS4-217ENST00000496385 IDI1Q13907 227 aa11.58□□□□□ -0.56
HPS4-217ENST00000496385 TRIM44Q96DX7 344 aaPredicted RBP11.57□□□□□ -0.56
HPS4-217ENST00000496385 ARHGAP31Q2M1Z3 1444 aa11.57□□□□□ -0.56
HPS4-217ENST00000496385 SYNMO15061 1565 aa11.57□□□□□ -0.56
HPS4-217ENST00000496385 USP19O94966 1318 aa11.56□□□□□ -0.56
HPS4-217ENST00000496385 MYO3AQ8NEV4 1616 aa11.56□□□□□ -0.56
HPS4-217ENST00000496385 UHRF1BP1Q6BDS2 1440 aa11.56□□□□□ -0.56
HPS4-217ENST00000496385 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.56□□□□□ -0.56
HPS4-217ENST00000496385 STAG3Q9UJ98 1225 aa11.56□□□□□ -0.56
HPS4-217ENST00000496385 SPATA31D1Q6ZQQ2 1576 aa11.56□□□□□ -0.56
HPS4-217ENST00000496385 MCM4P33991 863 aa11.56□□□□□ -0.56
HPS4-217ENST00000496385 NLRP13Q86W25 1043 aa11.56□□□□□ -0.56
HPS4-217ENST00000496385 LMTK3Q96Q04 1460 aa11.55□□□□□ -0.56
HPS4-217ENST00000496385 NUTM2DQ5VT03 806 aaPredicted RBP11.55□□□□□ -0.56
HPS4-217ENST00000496385 SETD1BQ9UPS6 1966 aaKnown RBP11.55□□□□□ -0.56
HPS4-217ENST00000496385 PDE4CQ08493 712 aa11.55□□□□□ -0.56
HPS4-217ENST00000496385 GRPEL1Q9HAV7 217 aa11.55□□□□□ -0.56
HPS4-217ENST00000496385 PLA2R1Q13018 1463 aa11.55□□□□□ -0.56
HPS4-217ENST00000496385 NOS1P29475 1434 aa11.54□□□□□ -0.56
HPS4-217ENST00000496385 PANK2Q9BZ23 570 aa11.54□□□□□ -0.56
HPS4-217ENST00000496385 USP47Q96K76 1375 aa11.54□□□□□ -0.56
HPS4-217ENST00000496385 BLMP54132 1417 aaPredicted RBP11.54□□□□□ -0.56
HPS4-217ENST00000496385 EIF3AQ14152 1382 aaKnown RBP11.54□□□□□ -0.56
HPS4-217ENST00000496385 A0A0U1RQG5 324 aaPredicted RBP11.54□□□□□ -0.56
HPS4-217ENST00000496385 SPHKAPQ2M3C7 1700 aa11.53□□□□□ -0.56
HPS4-217ENST00000496385 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.53□□□□□ -0.56
HPS4-217ENST00000496385 MAPK8IP3Q9UPT6 1336 aa11.53□□□□□ -0.56
HPS4-217ENST00000496385 OFD1O75665 1012 aa11.53□□□□□ -0.56
HPS4-217ENST00000496385 UTP14CQ5TAP6 766 aaKnown RBP11.53□□□□□ -0.56
HPS4-217ENST00000496385 CEP170BQ9Y4F5 1589 aaPredicted RBP11.53□□□□□ -0.56
HPS4-217ENST00000496385 PIK3C2BO00750 1634 aa11.53□□□□□ -0.56
HPS4-217ENST00000496385 RGL3Q3MIN7 710 aa11.52□□□□□ -0.56
HPS4-217ENST00000496385 KIAA1211Q6ZU35 1233 aa11.52□□□□□ -0.56
HPS4-217ENST00000496385 PLIN1O60240 522 aa11.52□□□□□ -0.57
HPS4-217ENST00000496385 SKAP1Q86WV1 359 aa11.52□□□□□ -0.57
HPS4-217ENST00000496385 DDX11L8A8MPP1 907 aa11.51□□□□□ -0.57
HPS4-217ENST00000496385 TRAK2O60296 914 aa11.51□□□□□ -0.57
HPS4-217ENST00000496385 PTMSP20962 102 aa11.51□□□□□ -0.57
HPS4-217ENST00000496385 RGS3P49796 1198 aa11.51□□□□□ -0.57
HPS4-217ENST00000496385 CLTCL1P53675 1640 aa11.51□□□□□ -0.57
HPS4-217ENST00000496385 UPF2Q9HAU5 1272 aaKnown RBP11.5□□□□□ -0.57
HPS4-217ENST00000496385 MYO5BQ9ULV0 1848 aa11.5□□□□□ -0.57
HPS4-217ENST00000496385 ERBB4Q15303 1308 aa11.5□□□□□ -0.57
HPS4-217ENST00000496385 NCKAP5LQ9HCH0 1330 aa11.5□□□□□ -0.57
HPS4-217ENST00000496385 PARD3Q8TEW0 1356 aa11.5□□□□□ -0.57
HPS4-217ENST00000496385 A2ML1A8K2U0 1454 aa11.5□□□□□ -0.57
HPS4-217ENST00000496385 NCBP3Q53F19 620 aaKnown RBP11.5□□□□□ -0.57
HPS4-217ENST00000496385 ZNF326Q5BKZ1 582 aaKnown RBP11.5□□□□□ -0.57
HPS4-217ENST00000496385 PTPRTO14522 1441 aa11.5□□□□□ -0.57
HPS4-217ENST00000496385 SLKQ9H2G2 1235 aaPredicted RBP11.5□□□□□ -0.57
HPS4-217ENST00000496385 SLC52A1Q9NWF4 448 aa11.5□□□□□ -0.57
HPS4-217ENST00000496385 CHMP5Q9NZZ3 219 aa11.5□□□□□ -0.57
HPS4-217ENST00000496385 NLRP1Q9C000 1473 aa11.49□□□□□ -0.57
HPS4-217ENST00000496385 CDCA7LQ96GN5 454 aa11.49□□□□□ -0.57
HPS4-217ENST00000496385 CCDC173Q0VFZ6 552 aa11.49□□□□□ -0.57
HPS4-217ENST00000496385 TRPM2O94759 1503 aa11.49□□□□□ -0.57
HPS4-217ENST00000496385 KCNA4P22459 653 aa11.48□□□□□ -0.57
HPS4-217ENST00000496385 UBR1Q8IWV7 1749 aa11.48□□□□□ -0.57
HPS4-217ENST00000496385 HS1BP3Q53T59 392 aa11.48□□□□□ -0.57
HPS4-217ENST00000496385 ZSCAN30Q86W11 494 aa11.48□□□□□ -0.57
HPS4-217ENST00000496385 THEMISQ8N1K5 641 aaPredicted RBP11.48□□□□□ -0.57
HPS4-217ENST00000496385 PPP1R9BQ96SB3 815 aa11.47□□□□□ -0.57
HPS4-217ENST00000496385 PHF23Q9BUL5 403 aaPredicted RBP11.47□□□□□ -0.57
HPS4-217ENST00000496385 LTKP29376 864 aa11.47□□□□□ -0.57
HPS4-217ENST00000496385 SKOR2Q2VWA4 1001 aaPredicted RBP11.47□□□□□ -0.57
HPS4-217ENST00000496385 ZNF142P52746 1687 aaPredicted RBP11.47□□□□□ -0.57
HPS4-217ENST00000496385 RALGAPBQ86X10 1494 aa11.46□□□□□ -0.57
HPS4-217ENST00000496385 RIPK4P57078 832 aa11.46□□□□□ -0.58
HPS4-217ENST00000496385 TXNDC2Q86VQ3 553 aa11.46□□□□□ -0.58
HPS4-217ENST00000496385 TBC1D32Q96NH3 1257 aa11.46□□□□□ -0.58
HPS4-217ENST00000496385 TMEM131LA2VDJ0 1609 aa11.46□□□□□ -0.58
HPS4-217ENST00000496385 C20orf194Q5TEA3 1177 aa11.45□□□□□ -0.58
HPS4-217ENST00000496385 TBC1D2Q9BYX2 928 aa11.45□□□□□ -0.58
HPS4-217ENST00000496385 ADGRB3O60242 1522 aa11.45□□□□□ -0.58
HPS4-217ENST00000496385 DYNC1I1O14576 645 aa11.44□□□□□ -0.58
HPS4-217ENST00000496385 KIF1BO60333 1816 aa11.44□□□□□ -0.58
HPS4-217ENST00000496385 ANKLE2Q86XL3 938 aa11.44□□□□□ -0.58
HPS4-217ENST00000496385 KDM2AQ9Y2K7 1162 aa11.44□□□□□ -0.58
HPS4-217ENST00000496385 TMEM2Q9UHN6 1383 aa11.44□□□□□ -0.58
HPS4-217ENST00000496385 MSNP26038 577 aaKnown RBP11.43□□□□□ -0.58
HPS4-217ENST00000496385 DMTNQ08495 405 aa11.43□□□□□ -0.58
HPS4-217ENST00000496385 ANP32BQ92688 251 aaKnown RBP11.43□□□□□ -0.58
HPS4-217ENST00000496385 GZF1Q9H116 711 aaPredicted RBP11.43□□□□□ -0.58
HPS4-217ENST00000496385 NINLQ9Y2I6 1382 aa11.43□□□□□ -0.58
HPS4-217ENST00000496385 STRCQ7RTU9 1775 aa11.43□□□□□ -0.58
HPS4-217ENST00000496385 TNNT2P45379 298 aaPredicted RBP11.43□□□□□ -0.58
HPS4-217ENST00000496385 SENP3-EIF4A1A0A087X0R7 540 aa11.42□□□□□ -0.58
HPS4-217ENST00000496385 SLC26A8Q96RN1 970 aa11.42□□□□□ -0.58
HPS4-217ENST00000496385 POLR3GLQ9BT43 218 aa11.42□□□□□ -0.58
HPS4-217ENST00000496385 RIMS2Q9UQ26 1411 aa11.42□□□□□ -0.58
HPS4-217ENST00000496385 IBTKQ9P2D0 1353 aaPredicted RBP11.42□□□□□ -0.58
HPS4-217ENST00000496385 KIF20AO95235 890 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms