RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 CDC42BPGQ6DT37 1551 aa18.08■□□□□ 0.49
SHROOM1-206ENST00000495680 CCDC144AA2RUR9 1427 aa18.08■□□□□ 0.49
SHROOM1-206ENST00000495680 NGLY1Q96IV0 654 aa18.08■□□□□ 0.48
SHROOM1-206ENST00000495680 STK26Q9P289 416 aa18.08■□□□□ 0.48
SHROOM1-206ENST00000495680 RBM6P78332 1123 aaKnown RBP18.07■□□□□ 0.48
SHROOM1-206ENST00000495680 WAPLQ7Z5K2 1190 aa18.07■□□□□ 0.48
SHROOM1-206ENST00000495680 MPHOSPH9Q99550 1183 aa18.07■□□□□ 0.48
SHROOM1-206ENST00000495680 PLEKHH1Q9ULM0 1364 aa18.06■□□□□ 0.48
SHROOM1-206ENST00000495680 XPCQ01831 940 aaPredicted RBP18.06■□□□□ 0.48
SHROOM1-206ENST00000495680 TMEM132EQ6IEE7 984 aa18.06■□□□□ 0.48
SHROOM1-206ENST00000495680 COL22A1Q8NFW1 1626 aaPredicted RBP18.05■□□□□ 0.48
SHROOM1-206ENST00000495680 NUTM2FA1L443 756 aa18.05■□□□□ 0.48
SHROOM1-206ENST00000495680 ESCO1Q5FWF5 840 aa18.05■□□□□ 0.48
SHROOM1-206ENST00000495680 PXDNQ92626 1479 aa18.05■□□□□ 0.48
SHROOM1-206ENST00000495680 TECPR2O15040 1411 aa18.05■□□□□ 0.48
SHROOM1-206ENST00000495680 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
SHROOM1-206ENST00000495680 MYOM2P54296 1465 aa18.03■□□□□ 0.48
SHROOM1-206ENST00000495680 PIK3C2GO75747 1445 aa18.03■□□□□ 0.48
SHROOM1-206ENST00000495680 FOXO3O43524 673 aa18.02■□□□□ 0.48
SHROOM1-206ENST00000495680 KNDC1Q76NI1 1749 aa18.02■□□□□ 0.48
SHROOM1-206ENST00000495680 USP21Q9UK80 565 aa18.02■□□□□ 0.48
SHROOM1-206ENST00000495680 ANKRD30BQ9BXX2 1392 aa18.02■□□□□ 0.47
SHROOM1-206ENST00000495680 FNBP4Q8N3X1 1017 aaPredicted RBP18.01■□□□□ 0.47
SHROOM1-206ENST00000495680 ABCC11Q96J66 1382 aa18.01■□□□□ 0.47
SHROOM1-206ENST00000495680 NPHP3Q7Z494 1330 aa18■□□□□ 0.47
SHROOM1-206ENST00000495680 FMN2Q9NZ56 1722 aa17.99■□□□□ 0.47
SHROOM1-206ENST00000495680 ATRNO75882 1429 aa17.98■□□□□ 0.47
SHROOM1-206ENST00000495680 YTHDC2Q9H6S0 1430 aaKnown RBP17.98■□□□□ 0.47
SHROOM1-206ENST00000495680 BCL9LQ86UU0 1499 aa17.97■□□□□ 0.47
SHROOM1-206ENST00000495680 TRPC5Q9UL62 973 aaPredicted RBP17.97■□□□□ 0.47
SHROOM1-206ENST00000495680 MARF1Q9Y4F3 1742 aaKnown RBP17.97■□□□□ 0.47
SHROOM1-206ENST00000495680 RGPD8O14715 1765 aaPredicted RBP17.95■□□□□ 0.46
SHROOM1-206ENST00000495680 NRXN1Q9ULB1 1477 aa17.95■□□□□ 0.46
SHROOM1-206ENST00000495680 CFAP70Q5T0N1 1121 aa17.94■□□□□ 0.46
SHROOM1-206ENST00000495680 C14orf93Q9H972 538 aaKnown RBP17.94■□□□□ 0.46
SHROOM1-206ENST00000495680 KIF1AQ12756 1690 aa17.92■□□□□ 0.46
SHROOM1-206ENST00000495680 SPATA31A3Q5VYP0 1347 aa17.92■□□□□ 0.46
SHROOM1-206ENST00000495680 ATAD2Q6PL18 1390 aa17.91■□□□□ 0.46
SHROOM1-206ENST00000495680 SAFB2Q14151 953 aaKnown RBP eCLIP17.9■□□□□ 0.46
SHROOM1-206ENST00000495680 KRT28Q7Z3Y7 464 aa17.9■□□□□ 0.46
SHROOM1-206ENST00000495680 SIRT1Q96EB6 747 aa17.89■□□□□ 0.45
SHROOM1-206ENST00000495680 GJD4Q96KN9 370 aaPredicted RBP17.88■□□□□ 0.45
SHROOM1-206ENST00000495680 PRAM1Q96QH2 718 aa17.88■□□□□ 0.45
SHROOM1-206ENST00000495680 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.88■□□□□ 0.45
SHROOM1-206ENST00000495680 RAB3GAP2Q9H2M9 1393 aa17.88■□□□□ 0.45
SHROOM1-206ENST00000495680 SLIT2O94813 1529 aa17.88■□□□□ 0.45
SHROOM1-206ENST00000495680 GLI3P10071 1580 aa17.87■□□□□ 0.45
SHROOM1-206ENST00000495680 USP32Q8NFA0 1604 aa17.87■□□□□ 0.45
SHROOM1-206ENST00000495680 PLEKHG5O94827 1062 aa17.87■□□□□ 0.45
SHROOM1-206ENST00000495680 CABLES1Q8TDN4 633 aa17.87■□□□□ 0.45
SHROOM1-206ENST00000495680 PHF8Q9UPP1 1060 aa17.87■□□□□ 0.45
SHROOM1-206ENST00000495680 DHX57Q6P158 1386 aaKnown RBP17.87■□□□□ 0.45
SHROOM1-206ENST00000495680 EP400Q96L91 3159 aa17.87■□□□□ 0.45
SHROOM1-206ENST00000495680 ADGRB1O14514 1584 aa17.85■□□□□ 0.45
SHROOM1-206ENST00000495680 TNS3Q68CZ2 1445 aa17.85■□□□□ 0.45
SHROOM1-206ENST00000495680 RALGAPBQ86X10 1494 aa17.85■□□□□ 0.45
SHROOM1-206ENST00000495680 UNC5CLQ8IV45 518 aa17.85■□□□□ 0.45
SHROOM1-206ENST00000495680 ABCA3Q99758 1704 aa17.84■□□□□ 0.45
SHROOM1-206ENST00000495680 DLC1Q96QB1 1528 aa17.83■□□□□ 0.45
SHROOM1-206ENST00000495680 PMFBP1Q8TBY8 1022 aa17.82■□□□□ 0.44
SHROOM1-206ENST00000495680 BRWD3Q6RI45 1802 aa17.82■□□□□ 0.44
SHROOM1-206ENST00000495680 PLCH1Q4KWH8 1693 aa17.81■□□□□ 0.44
SHROOM1-206ENST00000495680 HIRIP3Q9BW71 556 aaPredicted RBP17.81■□□□□ 0.44
SHROOM1-206ENST00000495680 POGKQ9P215 609 aa17.81■□□□□ 0.44
SHROOM1-206ENST00000495680 ADGRB2O60241 1585 aa17.81■□□□□ 0.44
SHROOM1-206ENST00000495680 SBNO1A3KN83 1393 aa17.8■□□□□ 0.44
SHROOM1-206ENST00000495680 LMOD2Q6P5Q4 547 aa17.8■□□□□ 0.44
SHROOM1-206ENST00000495680 TRAK1Q9UPV9 953 aa17.8■□□□□ 0.44
SHROOM1-206ENST00000495680 SRCAPQ6ZRS2 3230 aa17.8■□□□□ 0.44
SHROOM1-206ENST00000495680 PRR36Q9H6K5 1346 aa17.79■□□□□ 0.44
SHROOM1-206ENST00000495680 HAP1P54257 671 aaPredicted RBP17.79■□□□□ 0.44
SHROOM1-206ENST00000495680 PSME1Q06323 249 aa17.79■□□□□ 0.44
SHROOM1-206ENST00000495680 KDM2AQ9Y2K7 1162 aa17.79■□□□□ 0.44
SHROOM1-206ENST00000495680 ANKARQ7Z5J8 1434 aa17.79■□□□□ 0.44
SHROOM1-206ENST00000495680 TRPM3Q9HCF6 1732 aaPredicted RBP17.78■□□□□ 0.44
SHROOM1-206ENST00000495680 ACIN1Q9UKV3 1341 aaKnown RBP17.78■□□□□ 0.44
SHROOM1-206ENST00000495680 MINK1Q8N4C8 1332 aaPredicted RBP17.77■□□□□ 0.44
SHROOM1-206ENST00000495680 NWD2Q9ULI1 1742 aa17.76■□□□□ 0.43
SHROOM1-206ENST00000495680 FAM83GA6ND36 823 aa17.76■□□□□ 0.43
SHROOM1-206ENST00000495680 VPS72Q15906 364 aa17.76■□□□□ 0.43
SHROOM1-206ENST00000495680 DCAF11Q8TEB1 546 aa17.76■□□□□ 0.43
SHROOM1-206ENST00000495680 ARHGEF10O15013 1369 aa17.76■□□□□ 0.43
SHROOM1-206ENST00000495680 SEPT12Q8IYM1 358 aa17.75■□□□□ 0.43
SHROOM1-206ENST00000495680 ALS2Q96Q42 1657 aa17.74■□□□□ 0.43
SHROOM1-206ENST00000495680 CCDC125Q86Z20 511 aa17.74■□□□□ 0.43
SHROOM1-206ENST00000495680 TULP4Q9NRJ4 1543 aa17.73■□□□□ 0.43
SHROOM1-206ENST00000495680 NRAPQ86VF7 1730 aa17.73■□□□□ 0.43
SHROOM1-206ENST00000495680 DEFB132Q7Z7B7 95 aa17.73■□□□□ 0.43
SHROOM1-206ENST00000495680 ZRANB1Q9UGI0 708 aa17.73■□□□□ 0.43
SHROOM1-206ENST00000495680 CCDC9Q9Y3X0 531 aaKnown RBP17.73■□□□□ 0.43
SHROOM1-206ENST00000495680 BLMP54132 1417 aaPredicted RBP17.72■□□□□ 0.43
SHROOM1-206ENST00000495680 WASLO00401 505 aaPredicted RBP17.71■□□□□ 0.43
SHROOM1-206ENST00000495680 ONECUT3O60422 494 aaPredicted RBP17.71■□□□□ 0.43
SHROOM1-206ENST00000495680 ARHGEF28Q8N1W1 1705 aaKnown RBP17.71■□□□□ 0.43
SHROOM1-206ENST00000495680 CRYBG1Q9Y4K1 1723 aa17.7■□□□□ 0.42
SHROOM1-206ENST00000495680 GPRASP1Q5JY77 1395 aa17.69■□□□□ 0.42
SHROOM1-206ENST00000495680 BTG4Q9NY30 223 aa17.68■□□□□ 0.42
SHROOM1-206ENST00000495680 EIF3AQ14152 1382 aaKnown RBP17.67■□□□□ 0.42
SHROOM1-206ENST00000495680 COL14A1Q05707 1796 aaKnown RBP17.67■□□□□ 0.42
SHROOM1-206ENST00000495680 KRT27Q7Z3Y8 459 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms