RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 FAM160A2Q8N612 972 aaPredicted RBP10.36□□□□□ -0.75
GAPVD1-218ENST00000495588 SLC27A5Q9Y2P5 690 aa10.36□□□□□ -0.75
GAPVD1-218ENST00000495588 DDX11L8A8MPP1 907 aa10.35□□□□□ -0.75
GAPVD1-218ENST00000495588 P3H3Q8IVL6 736 aa10.35□□□□□ -0.75
GAPVD1-218ENST00000495588 SALL2Q9Y467 1007 aaPredicted RBP10.35□□□□□ -0.75
GAPVD1-218ENST00000495588 PRDM9Q9NQV7 894 aa10.34□□□□□ -0.75
GAPVD1-218ENST00000495588 WNT7AO00755 349 aa10.32□□□□□ -0.76
GAPVD1-218ENST00000495588 SEMA3EO15041 775 aa10.32□□□□□ -0.76
GAPVD1-218ENST00000495588 SULF1Q8IWU6 871 aa10.32□□□□□ -0.76
GAPVD1-218ENST00000495588 SNIP1Q8TAD8 396 aaKnown RBP10.32□□□□□ -0.76
GAPVD1-218ENST00000495588 ATP13A2Q9NQ11 1180 aa10.32□□□□□ -0.76
GAPVD1-218ENST00000495588 GCGRP47871 477 aa10.31□□□□□ -0.76
GAPVD1-218ENST00000495588 MSS51Q4VC12 460 aa10.31□□□□□ -0.76
GAPVD1-218ENST00000495588 BRICD5Q6PL45 260 aa10.31□□□□□ -0.76
GAPVD1-218ENST00000495588 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
GAPVD1-218ENST00000495588 SMPD1P17405 629 aa10.3□□□□□ -0.76
GAPVD1-218ENST00000495588 TERTO14746 1132 aaKnown RBP10.29□□□□□ -0.76
GAPVD1-218ENST00000495588 GNPATO15228 680 aa10.29□□□□□ -0.76
GAPVD1-218ENST00000495588 FECHP22830 423 aa10.29□□□□□ -0.76
GAPVD1-218ENST00000495588 GRIPAP1Q4V328 841 aa10.29□□□□□ -0.76
GAPVD1-218ENST00000495588 SCRIBQ14160 1630 aa10.29□□□□□ -0.76
GAPVD1-218ENST00000495588 SNRPBP14678 240 aaKnown RBP10.28□□□□□ -0.76
GAPVD1-218ENST00000495588 TRIM32Q13049 653 aa10.28□□□□□ -0.76
GAPVD1-218ENST00000495588 TRIM47Q96LD4 638 aa10.28□□□□□ -0.76
GAPVD1-218ENST00000495588 RNF19BQ6ZMZ0 732 aa10.27□□□□□ -0.77
GAPVD1-218ENST00000495588 SHROOM4Q9ULL8 1493 aa10.27□□□□□ -0.77
GAPVD1-218ENST00000495588 KIFC2Q96AC6 838 aa10.26□□□□□ -0.77
GAPVD1-218ENST00000495588 MRGPRX2Q96LB1 330 aa10.26□□□□□ -0.77
GAPVD1-218ENST00000495588 REPIN1Q9BWE0 567 aaKnown RBP10.26□□□□□ -0.77
GAPVD1-218ENST00000495588 Q3C1V9 767 aa10.25□□□□□ -0.77
GAPVD1-218ENST00000495588 RBM26Q5T8P6 1007 aaKnown RBP10.25□□□□□ -0.77
GAPVD1-218ENST00000495588 NLRP7Q8WX94 980 aa10.25□□□□□ -0.77
GAPVD1-218ENST00000495588 UNC13AQ9UPW8 1703 aa10.24□□□□□ -0.77
GAPVD1-218ENST00000495588 J3QL48 77 aa10.24□□□□□ -0.77
GAPVD1-218ENST00000495588 SMYD5Q6GMV2 418 aa10.24□□□□□ -0.77
GAPVD1-218ENST00000495588 MMP16P51512 607 aa10.22□□□□□ -0.77
GAPVD1-218ENST00000495588 FAM181BA6NEQ2 426 aa10.21□□□□□ -0.77
GAPVD1-218ENST00000495588 LCE2CQ5TA81 110 aa10.2□□□□□ -0.78
GAPVD1-218ENST00000495588 SLC16A10Q8TF71 515 aa10.2□□□□□ -0.78
GAPVD1-218ENST00000495588 HPS1Q92902 700 aa10.2□□□□□ -0.78
GAPVD1-218ENST00000495588 TESPA1A2RU30 521 aaPredicted RBP10.18□□□□□ -0.78
GAPVD1-218ENST00000495588 PHOX2BQ99453 314 aa10.17□□□□□ -0.78
GAPVD1-218ENST00000495588 USB1Q9BQ65 265 aaKnown RBP10.17□□□□□ -0.78
GAPVD1-218ENST00000495588 GPR37O15354 613 aa10.16□□□□□ -0.78
GAPVD1-218ENST00000495588 DXOO77932 396 aaKnown RBP10.16□□□□□ -0.78
GAPVD1-218ENST00000495588 RC3H1Q5TC82 1133 aaKnown RBP10.16□□□□□ -0.78
GAPVD1-218ENST00000495588 CCDC24Q8N4L8 307 aa10.16□□□□□ -0.78
GAPVD1-218ENST00000495588 WNT7BP56706 349 aa10.15□□□□□ -0.78
GAPVD1-218ENST00000495588 BICRAQ9NZM4 1560 aa10.14□□□□□ -0.79
GAPVD1-218ENST00000495588 NXF1Q9UBU9 619 aaKnown RBP10.13□□□□□ -0.79
GAPVD1-218ENST00000495588 KDM4AO75164 1064 aa10.12□□□□□ -0.79
GAPVD1-218ENST00000495588 ALDH1A1P00352 501 aa10.12□□□□□ -0.79
GAPVD1-218ENST00000495588 PRKCSHP14314 528 aaPredicted RBP10.12□□□□□ -0.79
GAPVD1-218ENST00000495588 CD46P15529 392 aa10.11□□□□□ -0.79
GAPVD1-218ENST00000495588 SKOR1P84550 965 aa10.11□□□□□ -0.79
GAPVD1-218ENST00000495588 IRF7Q92985 503 aa10.1□□□□□ -0.79
GAPVD1-218ENST00000495588 TPRNQ4KMQ1 711 aa10.09□□□□□ -0.79
GAPVD1-218ENST00000495588 NPAS3Q8IXF0 933 aa10.09□□□□□ -0.79
GAPVD1-218ENST00000495588 ZSCAN1Q8NBB4 408 aa10.09□□□□□ -0.79
GAPVD1-218ENST00000495588 USP46P62068 366 aa10.08□□□□□ -0.8
GAPVD1-218ENST00000495588 GMPRP36959 345 aa10.07□□□□□ -0.8
GAPVD1-218ENST00000495588 GPIHBP1Q8IV16 184 aa10.07□□□□□ -0.8
GAPVD1-218ENST00000495588 BMP1P13497 986 aa10.06□□□□□ -0.8
GAPVD1-218ENST00000495588 WASF2Q9Y6W5 498 aa10.06□□□□□ -0.8
GAPVD1-218ENST00000495588 CAPN5O15484 640 aaPredicted RBP10.05□□□□□ -0.8
GAPVD1-218ENST00000495588 EHBP1Q8NDI1 1231 aa10.05□□□□□ -0.8
GAPVD1-218ENST00000495588 JUNDP17535 347 aa10.04□□□□□ -0.8
GAPVD1-218ENST00000495588 TRIM46Q7Z4K8 759 aa10.03□□□□□ -0.8
GAPVD1-218ENST00000495588 HLA-CQ95604 372 aa10.03□□□□□ -0.8
GAPVD1-218ENST00000495588 HOXA2O43364 376 aa10.02□□□□□ -0.81
GAPVD1-218ENST00000495588 H3BM21 787 aa10.01□□□□□ -0.81
GAPVD1-218ENST00000495588 SIAH2O43255 324 aa10.01□□□□□ -0.81
GAPVD1-218ENST00000495588 VEGFBP49765 207 aa10.01□□□□□ -0.81
GAPVD1-218ENST00000495588 NUDT12Q9BQG2 462 aa10.01□□□□□ -0.81
GAPVD1-218ENST00000495588 LORP23490 312 aaPredicted RBP9.99□□□□□ -0.81
GAPVD1-218ENST00000495588 MDM2Q00987 491 aaPredicted RBP9.98□□□□□ -0.81
GAPVD1-218ENST00000495588 MAP2K5Q13163 448 aa9.98□□□□□ -0.81
GAPVD1-218ENST00000495588 GUCA2AQ02747 115 aa9.96□□□□□ -0.82
GAPVD1-218ENST00000495588 PTCRAQ6ISU1 281 aaPredicted RBP9.96□□□□□ -0.82
GAPVD1-218ENST00000495588 RETREG3Q86VR2 466 aa9.96□□□□□ -0.82
GAPVD1-218ENST00000495588 SYMPKQ92797 1274 aaKnown RBP9.96□□□□□ -0.82
GAPVD1-218ENST00000495588 ZFP42Q96MM3 310 aa9.96□□□□□ -0.82
GAPVD1-218ENST00000495588 ERBB4Q15303 1308 aa9.96□□□□□ -0.82
GAPVD1-218ENST00000495588 LOC100996750A0A140TA64 210 aa9.94□□□□□ -0.82
GAPVD1-218ENST00000495588 SH3BP2P78314 561 aa9.94□□□□□ -0.82
GAPVD1-218ENST00000495588 KRTAP4-6Q9BYQ5 205 aa9.94□□□□□ -0.82
GAPVD1-218ENST00000495588 CECR2Q9BXF3 1484 aa9.93□□□□□ -0.82
GAPVD1-218ENST00000495588 CCNYL3P0C7X3 344 aa9.93□□□□□ -0.82
GAPVD1-218ENST00000495588 NUTM1Q86Y26 1132 aa9.93□□□□□ -0.82
GAPVD1-218ENST00000495588 PLEKHG3A1L390 1219 aa9.92□□□□□ -0.82
GAPVD1-218ENST00000495588 IRF6O14896 467 aa9.92□□□□□ -0.82
GAPVD1-218ENST00000495588 MS4A1P11836 297 aa9.92□□□□□ -0.82
GAPVD1-218ENST00000495588 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.92□□□□□ -0.82
GAPVD1-218ENST00000495588 SCARF1Q14162 830 aa9.91□□□□□ -0.82
GAPVD1-218ENST00000495588 GPCPD1Q9NPB8 672 aa9.9□□□□□ -0.82
GAPVD1-218ENST00000495588 TLL2Q9Y6L7 1015 aa9.9□□□□□ -0.82
GAPVD1-218ENST00000495588 C6orf229H3BNL8 230 aa9.89□□□□□ -0.83
GAPVD1-218ENST00000495588 CLCN1P35523 988 aa9.89□□□□□ -0.83
GAPVD1-218ENST00000495588 MRPL14Q6P1L8 145 aaKnown RBP9.89□□□□□ -0.83
GAPVD1-218ENST00000495588 UNC93B1Q9H1C4 597 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms