RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 ORAI2Q96SN7 254 aa25.2■■□□□ 1.62
CTNS-207ENST00000495445 NHSL1Q5SYE7 1610 aa25.19■■□□□ 1.62
CTNS-207ENST00000495445 ADGRB1O14514 1584 aa25.19■■□□□ 1.62
CTNS-207ENST00000495445 CDC42BPGQ6DT37 1551 aa25.18■■□□□ 1.62
CTNS-207ENST00000495445 PHF23Q9BUL5 403 aaPredicted RBP25.18■■□□□ 1.62
CTNS-207ENST00000495445 DDX17Q92841 729 aaKnown RBP25.17■■□□□ 1.62
CTNS-207ENST00000495445 SPATA31A6Q5VVP1 1343 aa25.16■■□□□ 1.62
CTNS-207ENST00000495445 LRRC59Q96AG4 307 aaKnown RBP25.16■■□□□ 1.62
CTNS-207ENST00000495445 DLC1Q96QB1 1528 aa25.15■■□□□ 1.62
CTNS-207ENST00000495445 SOS2Q07890 1332 aaPredicted RBP25.13■■□□□ 1.61
CTNS-207ENST00000495445 SOCS7O14512 581 aa25.13■■□□□ 1.61
CTNS-207ENST00000495445 PRAM1Q96QH2 718 aa25.13■■□□□ 1.61
CTNS-207ENST00000495445 SHPRHQ149N8 1683 aa25.13■■□□□ 1.61
CTNS-207ENST00000495445 TRIM26Q12899 539 aaPredicted RBP25.11■■□□□ 1.61
CTNS-207ENST00000495445 ESCO1Q5FWF5 840 aa25.1■■□□□ 1.61
CTNS-207ENST00000495445 TRAK1Q9UPV9 953 aa25.1■■□□□ 1.61
CTNS-207ENST00000495445 SIN3AQ96ST3 1273 aa25.08■■□□□ 1.61
CTNS-207ENST00000495445 LRP6O75581 1613 aa25.08■■□□□ 1.6
CTNS-207ENST00000495445 POGKQ9P215 609 aa25.07■■□□□ 1.6
CTNS-207ENST00000495445 NUTM2FA1L443 756 aa25.06■■□□□ 1.6
CTNS-207ENST00000495445 FMN2Q9NZ56 1722 aa25.06■■□□□ 1.6
CTNS-207ENST00000495445 PNPLA6Q8IY17 1366 aa25.05■■□□□ 1.6
CTNS-207ENST00000495445 SAFB2Q14151 953 aaKnown RBP eCLIP25.05■■□□□ 1.6
CTNS-207ENST00000495445 L3MBTL2Q969R5 705 aa25.05■■□□□ 1.6
CTNS-207ENST00000495445 POTEAQ6S8J7 498 aa25.04■■□□□ 1.6
CTNS-207ENST00000495445 NPHP3Q7Z494 1330 aa25.04■■□□□ 1.6
CTNS-207ENST00000495445 FOXO3O43524 673 aa25.03■■□□□ 1.6
CTNS-207ENST00000495445 KIAA1210Q9ULL0 1709 aa25.02■■□□□ 1.6
CTNS-207ENST00000495445 NBPF1Q3BBV0 1214 aa25.01■■□□□ 1.59
CTNS-207ENST00000495445 PXDNQ92626 1479 aa25■■□□□ 1.59
CTNS-207ENST00000495445 NUTM2BA6NNL0 878 aaPredicted RBP24.99■■□□□ 1.59
CTNS-207ENST00000495445 NUTM2EB1AL46 878 aaPredicted RBP24.99■■□□□ 1.59
CTNS-207ENST00000495445 ADGRB2O60241 1585 aa24.99■■□□□ 1.59
CTNS-207ENST00000495445 NUTM2AQ8IVF1 878 aaPredicted RBP24.99■■□□□ 1.59
CTNS-207ENST00000495445 NEUROD1Q13562 356 aa24.97■■□□□ 1.59
CTNS-207ENST00000495445 PHF8Q9UPP1 1060 aa24.97■■□□□ 1.59
CTNS-207ENST00000495445 MINK1Q8N4C8 1332 aaPredicted RBP24.96■■□□□ 1.59
CTNS-207ENST00000495445 WASLO00401 505 aaPredicted RBP24.96■■□□□ 1.59
CTNS-207ENST00000495445 MEX3CQ5U5Q3 659 aaKnown RBP24.96■■□□□ 1.59
CTNS-207ENST00000495445 HIRIP3Q9BW71 556 aaPredicted RBP24.96■■□□□ 1.59
CTNS-207ENST00000495445 ANKARQ7Z5J8 1434 aa24.95■■□□□ 1.59
CTNS-207ENST00000495445 RGPD8O14715 1765 aaPredicted RBP24.95■■□□□ 1.59
CTNS-207ENST00000495445 ARHGEF28Q8N1W1 1705 aaKnown RBP24.94■■□□□ 1.58
CTNS-207ENST00000495445 XPCQ01831 940 aaPredicted RBP24.93■■□□□ 1.58
CTNS-207ENST00000495445 ZNF772Q68DY9 489 aaPredicted RBP24.93■■□□□ 1.58
CTNS-207ENST00000495445 KRT28Q7Z3Y7 464 aa24.93■■□□□ 1.58
CTNS-207ENST00000495445 KIF1AQ12756 1690 aa24.93■■□□□ 1.58
CTNS-207ENST00000495445 USP32Q8NFA0 1604 aa24.93■■□□□ 1.58
CTNS-207ENST00000495445 PRR36Q9H6K5 1346 aa24.91■■□□□ 1.58
CTNS-207ENST00000495445 COL22A1Q8NFW1 1626 aaPredicted RBP24.91■■□□□ 1.58
CTNS-207ENST00000495445 SPATA31A3Q5VYP0 1347 aa24.9■■□□□ 1.58
CTNS-207ENST00000495445 EIF3AQ14152 1382 aaKnown RBP24.89■■□□□ 1.57
CTNS-207ENST00000495445 TULP4Q9NRJ4 1543 aa24.87■■□□□ 1.57
CTNS-207ENST00000495445 PSME1Q06323 249 aa24.87■■□□□ 1.57
CTNS-207ENST00000495445 PMFBP1Q8TBY8 1022 aa24.87■■□□□ 1.57
CTNS-207ENST00000495445 AFF2P51816 1311 aa24.86■■□□□ 1.57
CTNS-207ENST00000495445 SBNO1A3KN83 1393 aa24.85■■□□□ 1.57
CTNS-207ENST00000495445 ADAMTS2O95450 1211 aa24.85■■□□□ 1.57
CTNS-207ENST00000495445 CDK19Q9BWU1 502 aa24.85■■□□□ 1.57
CTNS-207ENST00000495445 C8orf37Q96NL8 207 aa24.84■■□□□ 1.57
CTNS-207ENST00000495445 NBPF8Q3BBV2 869 aa24.83■■□□□ 1.57
CTNS-207ENST00000495445 NUDT16Q96DE0 195 aaKnown RBP24.83■■□□□ 1.57
CTNS-207ENST00000495445 FNBP4Q8N3X1 1017 aaPredicted RBP24.82■■□□□ 1.56
CTNS-207ENST00000495445 NGLY1Q96IV0 654 aa24.82■■□□□ 1.56
CTNS-207ENST00000495445 TRPM1Q7Z4N2 1603 aa24.81■■□□□ 1.56
CTNS-207ENST00000495445 CENPJQ9HC77 1338 aaPredicted RBP24.81■■□□□ 1.56
CTNS-207ENST00000495445 TNS3Q68CZ2 1445 aa24.79■■□□□ 1.56
CTNS-207ENST00000495445 ATP7BP35670 1465 aa24.79■■□□□ 1.56
CTNS-207ENST00000495445 QTRT2Q9H974 415 aaKnown RBP24.78■■□□□ 1.56
CTNS-207ENST00000495445 RXRBP28702 533 aa24.77■■□□□ 1.56
CTNS-207ENST00000495445 CCDC61Q9Y6R9 512 aa24.77■■□□□ 1.56
CTNS-207ENST00000495445 GPRASP1Q5JY77 1395 aa24.77■■□□□ 1.56
CTNS-207ENST00000495445 PLEKHG3A1L390 1219 aa24.76■■□□□ 1.55
CTNS-207ENST00000495445 NGDNQ8NEJ9 315 aaKnown RBP24.75■■□□□ 1.55
CTNS-207ENST00000495445 ARHGEF10O15013 1369 aa24.75■■□□□ 1.55
CTNS-207ENST00000495445 ROCK2O75116 1388 aaKnown RBP24.75■■□□□ 1.55
CTNS-207ENST00000495445 TRPM3Q9HCF6 1732 aaPredicted RBP24.74■■□□□ 1.55
CTNS-207ENST00000495445 USP21Q9UK80 565 aa24.73■■□□□ 1.55
CTNS-207ENST00000495445 POLR3AO14802 1390 aaPredicted RBP24.72■■□□□ 1.55
CTNS-207ENST00000495445 TONSLQ96HA7 1378 aa24.72■■□□□ 1.55
CTNS-207ENST00000495445 MARF1Q9Y4F3 1742 aaKnown RBP24.72■■□□□ 1.55
CTNS-207ENST00000495445 CDK12Q9NYV4 1490 aaPredicted RBP24.71■■□□□ 1.55
CTNS-207ENST00000495445 RBM6P78332 1123 aaKnown RBP24.71■■□□□ 1.55
CTNS-207ENST00000495445 CABLES1Q8TDN4 633 aa24.71■■□□□ 1.55
CTNS-207ENST00000495445 ITSN1Q15811 1721 aa24.71■■□□□ 1.55
CTNS-207ENST00000495445 BCL9LQ86UU0 1499 aa24.7■■□□□ 1.55
CTNS-207ENST00000495445 LMOD2Q6P5Q4 547 aa24.69■■□□□ 1.54
CTNS-207ENST00000495445 CABP2Q9NPB3 220 aa24.69■■□□□ 1.54
CTNS-207ENST00000495445 TOPAZ1Q8N9V7 1692 aa24.69■■□□□ 1.54
CTNS-207ENST00000495445 ALS2Q96Q42 1657 aa24.69■■□□□ 1.54
CTNS-207ENST00000495445 ACEP12821 1306 aa24.68■■□□□ 1.54
CTNS-207ENST00000495445 TRPC5Q9UL62 973 aaPredicted RBP24.68■■□□□ 1.54
CTNS-207ENST00000495445 QRICH2Q9H0J4 1663 aa24.68■■□□□ 1.54
CTNS-207ENST00000495445 SRPK2P78362 688 aaKnown RBP24.67■■□□□ 1.54
CTNS-207ENST00000495445 ATRNO75882 1429 aa24.67■■□□□ 1.54
CTNS-207ENST00000495445 SLIT2O94813 1529 aa24.66■■□□□ 1.54
CTNS-207ENST00000495445 EVC2Q86UK5 1308 aa24.64■■□□□ 1.54
CTNS-207ENST00000495445 CARD11Q9BXL7 1154 aa24.64■■□□□ 1.54
CTNS-207ENST00000495445 RALGAPBQ86X10 1494 aa24.64■■□□□ 1.53
CTNS-207ENST00000495445 UNC5CLQ8IV45 518 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 253.1 ms