RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 ATRNO75882 1429 aa24.01■■□□□ 1.43
COL4A2-209ENST00000494852 RRBP1Q9P2E9 1410 aaKnown RBP24■■□□□ 1.43
COL4A2-209ENST00000494852 NPHP3Q7Z494 1330 aa23.99■■□□□ 1.43
COL4A2-209ENST00000494852 MYOM2P54296 1465 aa23.97■■□□□ 1.43
COL4A2-209ENST00000494852 PPLO60437 1756 aa23.96■■□□□ 1.43
COL4A2-209ENST00000494852 CDC42BPGQ6DT37 1551 aa23.96■■□□□ 1.43
COL4A2-209ENST00000494852 FOXD1Q16676 465 aa23.96■■□□□ 1.43
COL4A2-209ENST00000494852 ESCO1Q5FWF5 840 aa23.96■■□□□ 1.43
COL4A2-209ENST00000494852 PXDNQ92626 1479 aa23.94■■□□□ 1.42
COL4A2-209ENST00000494852 SLC4A1APQ9BWU0 796 aaKnown RBP23.94■■□□□ 1.42
COL4A2-209ENST00000494852 BCL9LQ86UU0 1499 aa23.94■■□□□ 1.42
COL4A2-209ENST00000494852 CCDC125Q86Z20 511 aa23.93■■□□□ 1.42
COL4A2-209ENST00000494852 EP400Q96L91 3159 aa23.93■■□□□ 1.42
COL4A2-209ENST00000494852 LRPPRCP42704 1394 aaKnown RBP23.91■■□□□ 1.42
COL4A2-209ENST00000494852 FOXO3O43524 673 aa23.91■■□□□ 1.42
COL4A2-209ENST00000494852 ZRANB1Q9UGI0 708 aa23.9■■□□□ 1.42
COL4A2-209ENST00000494852 MARF1Q9Y4F3 1742 aaKnown RBP23.9■■□□□ 1.42
COL4A2-209ENST00000494852 TECPR2O15040 1411 aa23.88■■□□□ 1.41
COL4A2-209ENST00000494852 GJD4Q96KN9 370 aaPredicted RBP23.88■■□□□ 1.41
COL4A2-209ENST00000494852 ADGRF5Q8IZF2 1346 aa23.86■■□□□ 1.41
COL4A2-209ENST00000494852 XPCQ01831 940 aaPredicted RBP23.86■■□□□ 1.41
COL4A2-209ENST00000494852 WAPLQ7Z5K2 1190 aa23.85■■□□□ 1.41
COL4A2-209ENST00000494852 ABCC11Q96J66 1382 aa23.84■■□□□ 1.41
COL4A2-209ENST00000494852 STK26Q9P289 416 aa23.83■■□□□ 1.41
COL4A2-209ENST00000494852 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.83■■□□□ 1.41
COL4A2-209ENST00000494852 ANKRD30BQ9BXX2 1392 aa23.82■■□□□ 1.4
COL4A2-209ENST00000494852 UNC5CLQ8IV45 518 aa23.82■■□□□ 1.4
COL4A2-209ENST00000494852 NUTM2FA1L443 756 aa23.81■■□□□ 1.4
COL4A2-209ENST00000494852 CCDC144AA2RUR9 1427 aa23.81■■□□□ 1.4
COL4A2-209ENST00000494852 SPATA31E1Q6ZUB1 1445 aa23.81■■□□□ 1.4
COL4A2-209ENST00000494852 SPATA31A3Q5VYP0 1347 aa23.81■■□□□ 1.4
COL4A2-209ENST00000494852 SLIT2O94813 1529 aa23.8■■□□□ 1.4
COL4A2-209ENST00000494852 KNDC1Q76NI1 1749 aa23.79■■□□□ 1.4
COL4A2-209ENST00000494852 RGL3Q3MIN7 710 aa23.79■■□□□ 1.4
COL4A2-209ENST00000494852 PLEKHH1Q9ULM0 1364 aa23.78■■□□□ 1.4
COL4A2-209ENST00000494852 RALGAPBQ86X10 1494 aa23.78■■□□□ 1.4
COL4A2-209ENST00000494852 KIF1AQ12756 1690 aa23.77■■□□□ 1.4
COL4A2-209ENST00000494852 FMN2Q9NZ56 1722 aa23.77■■□□□ 1.4
COL4A2-209ENST00000494852 IFT172Q9UG01 1749 aa23.77■■□□□ 1.4
COL4A2-209ENST00000494852 TMEM132EQ6IEE7 984 aa23.77■■□□□ 1.4
COL4A2-209ENST00000494852 SIRT1Q96EB6 747 aa23.77■■□□□ 1.4
COL4A2-209ENST00000494852 GLI3P10071 1580 aa23.77■■□□□ 1.4
COL4A2-209ENST00000494852 PIK3C2GO75747 1445 aa23.76■■□□□ 1.39
COL4A2-209ENST00000494852 BLMP54132 1417 aaPredicted RBP23.76■■□□□ 1.39
COL4A2-209ENST00000494852 KRT28Q7Z3Y7 464 aa23.75■■□□□ 1.39
COL4A2-209ENST00000494852 YTHDC2Q9H6S0 1430 aaKnown RBP23.75■■□□□ 1.39
COL4A2-209ENST00000494852 USP32Q8NFA0 1604 aa23.73■■□□□ 1.39
COL4A2-209ENST00000494852 PSME1Q06323 249 aa23.71■■□□□ 1.39
COL4A2-209ENST00000494852 MPHOSPH9Q99550 1183 aa23.71■■□□□ 1.39
COL4A2-209ENST00000494852 VPS72Q15906 364 aa23.7■■□□□ 1.38
COL4A2-209ENST00000494852 PHF8Q9UPP1 1060 aa23.7■■□□□ 1.38
COL4A2-209ENST00000494852 TNS3Q68CZ2 1445 aa23.69■■□□□ 1.38
COL4A2-209ENST00000494852 ONECUT3O60422 494 aaPredicted RBP23.69■■□□□ 1.38
COL4A2-209ENST00000494852 SEPT12Q8IYM1 358 aa23.68■■□□□ 1.38
COL4A2-209ENST00000494852 C14orf93Q9H972 538 aaKnown RBP23.68■■□□□ 1.38
COL4A2-209ENST00000494852 SBNO1A3KN83 1393 aa23.67■■□□□ 1.38
COL4A2-209ENST00000494852 HAP1P54257 671 aaPredicted RBP23.67■■□□□ 1.38
COL4A2-209ENST00000494852 BRWD3Q6RI45 1802 aa23.67■■□□□ 1.38
COL4A2-209ENST00000494852 SF3B2Q13435 895 aaKnown RBP23.66■■□□□ 1.38
COL4A2-209ENST00000494852 NRXN1Q9ULB1 1477 aa23.65■■□□□ 1.38
COL4A2-209ENST00000494852 CABLES1Q8TDN4 633 aa23.65■■□□□ 1.38
COL4A2-209ENST00000494852 DHX57Q6P158 1386 aaKnown RBP23.65■■□□□ 1.38
COL4A2-209ENST00000494852 NWD2Q9ULI1 1742 aa23.64■■□□□ 1.38
COL4A2-209ENST00000494852 DEFB132Q7Z7B7 95 aa23.64■■□□□ 1.37
COL4A2-209ENST00000494852 RGPD8O14715 1765 aaPredicted RBP23.64■■□□□ 1.37
COL4A2-209ENST00000494852 ARHGEF10O15013 1369 aa23.64■■□□□ 1.37
COL4A2-209ENST00000494852 PLCH1Q4KWH8 1693 aa23.62■■□□□ 1.37
COL4A2-209ENST00000494852 KRT27Q7Z3Y8 459 aa23.61■■□□□ 1.37
COL4A2-209ENST00000494852 CFAP70Q5T0N1 1121 aa23.6■■□□□ 1.37
COL4A2-209ENST00000494852 CCDC9Q9Y3X0 531 aaKnown RBP23.6■■□□□ 1.37
COL4A2-209ENST00000494852 ABCA3Q99758 1704 aa23.59■■□□□ 1.37
COL4A2-209ENST00000494852 FAM83GA6ND36 823 aa23.59■■□□□ 1.37
COL4A2-209ENST00000494852 LMOD2Q6P5Q4 547 aa23.59■■□□□ 1.37
COL4A2-209ENST00000494852 PRAM1Q96QH2 718 aa23.59■■□□□ 1.37
COL4A2-209ENST00000494852 ACIN1Q9UKV3 1341 aaKnown RBP23.59■■□□□ 1.37
COL4A2-209ENST00000494852 ANKARQ7Z5J8 1434 aa23.58■■□□□ 1.36
COL4A2-209ENST00000494852 DLC1Q96QB1 1528 aa23.56■■□□□ 1.36
COL4A2-209ENST00000494852 PLEKHG5O94827 1062 aa23.56■■□□□ 1.36
COL4A2-209ENST00000494852 SAFB2Q14151 953 aaKnown RBP eCLIP23.55■■□□□ 1.36
COL4A2-209ENST00000494852 PMFBP1Q8TBY8 1022 aa23.54■■□□□ 1.36
COL4A2-209ENST00000494852 POGKQ9P215 609 aa23.54■■□□□ 1.36
COL4A2-209ENST00000494852 LRP5O75197 1615 aa23.54■■□□□ 1.36
COL4A2-209ENST00000494852 ADGRB2O60241 1585 aa23.52■■□□□ 1.36
COL4A2-209ENST00000494852 BAG6P46379 1132 aa23.52■■□□□ 1.36
COL4A2-209ENST00000494852 BTG4Q9NY30 223 aa23.51■■□□□ 1.35
COL4A2-209ENST00000494852 NRAPQ86VF7 1730 aa23.5■■□□□ 1.35
COL4A2-209ENST00000494852 FAM98CQ17RN3 349 aaKnown RBP23.5■■□□□ 1.35
COL4A2-209ENST00000494852 TRPM3Q9HCF6 1732 aaPredicted RBP23.5■■□□□ 1.35
COL4A2-209ENST00000494852 A0A0G2JS52 829 aa23.49■■□□□ 1.35
COL4A2-209ENST00000494852 MYT1Q01538 1121 aa23.49■■□□□ 1.35
COL4A2-209ENST00000494852 GPRASP1Q5JY77 1395 aa23.49■■□□□ 1.35
COL4A2-209ENST00000494852 EIF3AQ14152 1382 aaKnown RBP23.48■■□□□ 1.35
COL4A2-209ENST00000494852 COL14A1Q05707 1796 aaKnown RBP23.47■■□□□ 1.35
COL4A2-209ENST00000494852 ADGRB1O14514 1584 aa23.47■■□□□ 1.35
COL4A2-209ENST00000494852 ALS2Q96Q42 1657 aa23.47■■□□□ 1.35
COL4A2-209ENST00000494852 HRCP23327 699 aa23.45■■□□□ 1.34
COL4A2-209ENST00000494852 SPATA31A5Q5VU36 1347 aa23.44■■□□□ 1.34
COL4A2-209ENST00000494852 SPATA31A7Q8IWB4 1347 aa23.44■■□□□ 1.34
COL4A2-209ENST00000494852 PSDA5PKW4 1024 aaPredicted RBP23.44■■□□□ 1.34
COL4A2-209ENST00000494852 HIRIP3Q9BW71 556 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms