RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 BHMG1C9JSJ3 638 aaPredicted RBP11.83□□□□□ -0.52
RPGR-210ENST00000494841 HRO43593 1189 aa11.83□□□□□ -0.52
RPGR-210ENST00000494841 ABCC2Q92887 1545 aa11.82□□□□□ -0.52
RPGR-210ENST00000494841 AMHR2Q16671 573 aa11.82□□□□□ -0.52
RPGR-210ENST00000494841 SEPT9Q9UHD8 586 aaPredicted RBP11.82□□□□□ -0.52
RPGR-210ENST00000494841 UHRF1BP1LA0JNW5 1464 aa11.82□□□□□ -0.52
RPGR-210ENST00000494841 NLRP7Q8WX94 980 aa11.8□□□□□ -0.52
RPGR-210ENST00000494841 NBPF3Q9H094 633 aa11.8□□□□□ -0.52
RPGR-210ENST00000494841 ATP10BO94823 1461 aa11.79□□□□□ -0.52
RPGR-210ENST00000494841 NUP153P49790 1475 aaKnown RBP11.79□□□□□ -0.52
RPGR-210ENST00000494841 PDE4DQ08499 809 aa11.79□□□□□ -0.52
RPGR-210ENST00000494841 PCF11O94913 1555 aaKnown RBP11.79□□□□□ -0.52
RPGR-210ENST00000494841 CASKIN1Q8WXD9 1431 aa11.78□□□□□ -0.52
RPGR-210ENST00000494841 LRRIQ1Q96JM4 1722 aa11.78□□□□□ -0.52
RPGR-210ENST00000494841 RCCD1A6NED2 376 aa11.78□□□□□ -0.52
RPGR-210ENST00000494841 ZCCHC11Q5TAX3 1644 aaKnown RBP11.78□□□□□ -0.52
RPGR-210ENST00000494841 KDM5BQ9UGL1 1544 aa11.77□□□□□ -0.52
RPGR-210ENST00000494841 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.77□□□□□ -0.53
RPGR-210ENST00000494841 FAM98CQ17RN3 349 aaKnown RBP11.77□□□□□ -0.53
RPGR-210ENST00000494841 LAPTM4BQ86VI4 370 aa11.77□□□□□ -0.53
RPGR-210ENST00000494841 VPS8Q8N3P4 1428 aa11.77□□□□□ -0.53
RPGR-210ENST00000494841 DNAJB2P25686 324 aa11.76□□□□□ -0.53
RPGR-210ENST00000494841 BRPF1P55201 1214 aaPredicted RBP11.76□□□□□ -0.53
RPGR-210ENST00000494841 PARP9Q8IXQ6 854 aa11.76□□□□□ -0.53
RPGR-210ENST00000494841 MRPL50Q8N5N7 158 aaKnown RBP11.76□□□□□ -0.53
RPGR-210ENST00000494841 CDK13Q14004 1512 aaKnown RBP11.76□□□□□ -0.53
RPGR-210ENST00000494841 MDM2Q00987 491 aaPredicted RBP11.75□□□□□ -0.53
RPGR-210ENST00000494841 TMEM134Q9H6X4 195 aa11.75□□□□□ -0.53
RPGR-210ENST00000494841 EPRSP07814 1512 aaKnown RBP11.75□□□□□ -0.53
RPGR-210ENST00000494841 HECW1Q76N89 1606 aa11.75□□□□□ -0.53
RPGR-210ENST00000494841 TMUB1Q9BVT8 246 aa11.74□□□□□ -0.53
RPGR-210ENST00000494841 REPIN1Q9BWE0 567 aaKnown RBP11.74□□□□□ -0.53
RPGR-210ENST00000494841 FYCO1Q9BQS8 1478 aa11.74□□□□□ -0.53
RPGR-210ENST00000494841 TTLL12Q14166 644 aaPredicted RBP11.73□□□□□ -0.53
RPGR-210ENST00000494841 ASXL2Q76L83 1435 aa11.73□□□□□ -0.53
RPGR-210ENST00000494841 PLEKHD1A6NEE1 506 aa11.72□□□□□ -0.53
RPGR-210ENST00000494841 CLCN1P35523 988 aa11.72□□□□□ -0.53
RPGR-210ENST00000494841 NEUROD2Q15784 382 aa11.72□□□□□ -0.53
RPGR-210ENST00000494841 GPBP1L1Q9HC44 474 aaPredicted RBP11.72□□□□□ -0.53
RPGR-210ENST00000494841 GPCPD1Q9NPB8 672 aa11.72□□□□□ -0.53
RPGR-210ENST00000494841 PCDH10Q9P2E7 1040 aa11.72□□□□□ -0.53
RPGR-210ENST00000494841 ZFRQ96KR1 1074 aaKnown RBP11.71□□□□□ -0.53
RPGR-210ENST00000494841 GIGYF2Q6Y7W6 1299 aaKnown RBP11.7□□□□□ -0.54
RPGR-210ENST00000494841 MAPKBP1O60336 1514 aa11.7□□□□□ -0.54
RPGR-210ENST00000494841 SWT1Q5T5J6 900 aaKnown RBP11.69□□□□□ -0.54
RPGR-210ENST00000494841 DAXXQ9UER7 740 aaPredicted RBP11.69□□□□□ -0.54
RPGR-210ENST00000494841 FAM69CQ0P6D2 419 aa11.68□□□□□ -0.54
RPGR-210ENST00000494841 PPARGC1BQ86YN6 1023 aaKnown RBP11.68□□□□□ -0.54
RPGR-210ENST00000494841 STAC3Q96MF2 364 aa11.68□□□□□ -0.54
RPGR-210ENST00000494841 KDM4CQ9H3R0 1056 aa11.68□□□□□ -0.54
RPGR-210ENST00000494841 CDK11AQ9UQ88 783 aaPredicted RBP11.68□□□□□ -0.54
RPGR-210ENST00000494841 CCDC18Q5T9S5 1454 aa11.68□□□□□ -0.54
RPGR-210ENST00000494841 MAGI3Q5TCQ9 1506 aa11.67□□□□□ -0.54
RPGR-210ENST00000494841 KANK4Q5T7N3 995 aaPredicted RBP11.67□□□□□ -0.54
RPGR-210ENST00000494841 SAMD7Q7Z3H4 446 aa11.67□□□□□ -0.54
RPGR-210ENST00000494841 WDR7Q9Y4E6 1490 aa11.67□□□□□ -0.54
RPGR-210ENST00000494841 FAM217BQ9NTX9 383 aaPredicted RBP11.66□□□□□ -0.54
RPGR-210ENST00000494841 TIAM1Q13009 1591 aa11.65□□□□□ -0.54
RPGR-210ENST00000494841 KIF13AQ9H1H9 1805 aa11.65□□□□□ -0.55
RPGR-210ENST00000494841 ABCC10Q5T3U5 1492 aa11.64□□□□□ -0.55
RPGR-210ENST00000494841 GOLGA8CPA6NN73 597 aa11.64□□□□□ -0.55
RPGR-210ENST00000494841 MS4A1P11836 297 aa11.64□□□□□ -0.55
RPGR-210ENST00000494841 ANKK1Q8NFD2 765 aa11.64□□□□□ -0.55
RPGR-210ENST00000494841 TROQ12816 1431 aaPredicted RBP11.63□□□□□ -0.55
RPGR-210ENST00000494841 CFAP43Q8NDM7 1665 aa11.63□□□□□ -0.55
RPGR-210ENST00000494841 LRCH3Q96II8 777 aa11.63□□□□□ -0.55
RPGR-210ENST00000494841 MTUS2Q5JR59 1369 aa11.63□□□□□ -0.55
RPGR-210ENST00000494841 DIP2BQ9P265 1576 aa11.62□□□□□ -0.55
RPGR-210ENST00000494841 KIF14Q15058 1648 aa11.62□□□□□ -0.55
RPGR-210ENST00000494841 WNT2BQ93097 391 aa11.62□□□□□ -0.55
RPGR-210ENST00000494841 TSPOAP1O95153 1857 aa11.61□□□□□ -0.55
RPGR-210ENST00000494841 MAP3K1Q13233 1512 aa11.61□□□□□ -0.55
RPGR-210ENST00000494841 DDX11L8A8MPP1 907 aa11.61□□□□□ -0.55
RPGR-210ENST00000494841 SSTR3P32745 418 aaPredicted RBP11.61□□□□□ -0.55
RPGR-210ENST00000494841 HDGFP51858 240 aaKnown RBP11.61□□□□□ -0.55
RPGR-210ENST00000494841 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.61□□□□□ -0.55
RPGR-210ENST00000494841 LRRC9Q6ZRR7 1453 aa11.61□□□□□ -0.55
RPGR-210ENST00000494841 SOWAHBA6NEL2 793 aa11.6□□□□□ -0.55
RPGR-210ENST00000494841 BCAMP50895 628 aa11.6□□□□□ -0.55
RPGR-210ENST00000494841 SULF1Q8IWU6 871 aa11.6□□□□□ -0.55
RPGR-210ENST00000494841 SLF2Q8IX21 1173 aa11.6□□□□□ -0.55
RPGR-210ENST00000494841 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.6□□□□□ -0.55
RPGR-210ENST00000494841 SLC10A3P09131 477 aa11.59□□□□□ -0.55
RPGR-210ENST00000494841 CD46P15529 392 aa11.59□□□□□ -0.55
RPGR-210ENST00000494841 SPNS2Q8IVW8 549 aa11.59□□□□□ -0.55
RPGR-210ENST00000494841 GLI2P10070 1586 aa11.58□□□□□ -0.55
RPGR-210ENST00000494841 RNF40O75150 1001 aa11.58□□□□□ -0.56
RPGR-210ENST00000494841 FAM117AQ9C073 453 aa11.58□□□□□ -0.56
RPGR-210ENST00000494841 MYT1LQ9UL68 1186 aa11.58□□□□□ -0.56
RPGR-210ENST00000494841 CD109Q6YHK3 1445 aa11.58□□□□□ -0.56
RPGR-210ENST00000494841 TTC37Q6PGP7 1564 aa11.58□□□□□ -0.56
RPGR-210ENST00000494841 EHBP1L1Q8N3D4 1523 aa11.57□□□□□ -0.56
RPGR-210ENST00000494841 KCTD12Q96CX2 325 aaKnown RBP11.57□□□□□ -0.56
RPGR-210ENST00000494841 ABCA9Q8IUA7 1624 aa11.57□□□□□ -0.56
RPGR-210ENST00000494841 MAP3K4Q9Y6R4 1608 aa11.57□□□□□ -0.56
RPGR-210ENST00000494841 SLC4A3P48751 1232 aa11.56□□□□□ -0.56
RPGR-210ENST00000494841 THSD4Q6ZMP0 1018 aa11.56□□□□□ -0.56
RPGR-210ENST00000494841 RDH13Q8NBN7 331 aa11.56□□□□□ -0.56
RPGR-210ENST00000494841 SUPT6HQ7KZ85 1726 aaKnown RBP11.55□□□□□ -0.56
RPGR-210ENST00000494841 NCOA2Q15596 1464 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms