RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 DHX57Q6P158 1386 aaKnown RBP19.27■□□□□ 0.68
ERCC3-209ENST00000494464 CFAP70Q5T0N1 1121 aa19.27■□□□□ 0.68
ERCC3-209ENST00000494464 STK26Q9P289 416 aa19.27■□□□□ 0.68
ERCC3-209ENST00000494464 PLEKHH1Q9ULM0 1364 aa19.26■□□□□ 0.67
ERCC3-209ENST00000494464 SIRT1Q96EB6 747 aa19.26■□□□□ 0.67
ERCC3-209ENST00000494464 SPATA31A6Q5VVP1 1343 aa19.26■□□□□ 0.67
ERCC3-209ENST00000494464 LRP6O75581 1613 aa19.24■□□□□ 0.67
ERCC3-209ENST00000494464 ADGRB2O60241 1585 aa19.23■□□□□ 0.67
ERCC3-209ENST00000494464 WAPLQ7Z5K2 1190 aa19.23■□□□□ 0.67
ERCC3-209ENST00000494464 DCAF11Q8TEB1 546 aa19.23■□□□□ 0.67
ERCC3-209ENST00000494464 KIAA1210Q9ULL0 1709 aa19.22■□□□□ 0.67
ERCC3-209ENST00000494464 KIF1AQ12756 1690 aa19.21■□□□□ 0.67
ERCC3-209ENST00000494464 SOCS7O14512 581 aa19.2■□□□□ 0.66
ERCC3-209ENST00000494464 RGS17Q9UGC6 210 aaPredicted RBP19.19■□□□□ 0.66
ERCC3-209ENST00000494464 ARHGEF28Q8N1W1 1705 aaKnown RBP19.19■□□□□ 0.66
ERCC3-209ENST00000494464 LRRC59Q96AG4 307 aaKnown RBP19.19■□□□□ 0.66
ERCC3-209ENST00000494464 ORAI2Q96SN7 254 aa19.19■□□□□ 0.66
ERCC3-209ENST00000494464 KDM2AQ9Y2K7 1162 aa19.19■□□□□ 0.66
ERCC3-209ENST00000494464 SOS2Q07890 1332 aaPredicted RBP19.18■□□□□ 0.66
ERCC3-209ENST00000494464 PNPLA6Q8IY17 1366 aa19.17■□□□□ 0.66
ERCC3-209ENST00000494464 DDX17Q92841 729 aaKnown RBP19.17■□□□□ 0.66
ERCC3-209ENST00000494464 COL22A1Q8NFW1 1626 aaPredicted RBP19.16■□□□□ 0.66
ERCC3-209ENST00000494464 PRAM1Q96QH2 718 aa19.16■□□□□ 0.66
ERCC3-209ENST00000494464 PXDNQ92626 1479 aa19.16■□□□□ 0.66
ERCC3-209ENST00000494464 NPHP3Q7Z494 1330 aa19.15■□□□□ 0.66
ERCC3-209ENST00000494464 RGPD8O14715 1765 aaPredicted RBP19.14■□□□□ 0.66
ERCC3-209ENST00000494464 USP32Q8NFA0 1604 aa19.13■□□□□ 0.65
ERCC3-209ENST00000494464 ESCO1Q5FWF5 840 aa19.13■□□□□ 0.65
ERCC3-209ENST00000494464 ANKARQ7Z5J8 1434 aa19.12■□□□□ 0.65
ERCC3-209ENST00000494464 POGKQ9P215 609 aa19.11■□□□□ 0.65
ERCC3-209ENST00000494464 TRAK1Q9UPV9 953 aa19.11■□□□□ 0.65
ERCC3-209ENST00000494464 NUTM2FA1L443 756 aa19.09■□□□□ 0.65
ERCC3-209ENST00000494464 SAFB2Q14151 953 aaKnown RBP eCLIP19.09■□□□□ 0.65
ERCC3-209ENST00000494464 MEX3CQ5U5Q3 659 aaKnown RBP19.09■□□□□ 0.65
ERCC3-209ENST00000494464 EIF3AQ14152 1382 aaKnown RBP19.09■□□□□ 0.65
ERCC3-209ENST00000494464 TULP4Q9NRJ4 1543 aa19.09■□□□□ 0.65
ERCC3-209ENST00000494464 POTEAQ6S8J7 498 aa19.08■□□□□ 0.65
ERCC3-209ENST00000494464 NUTM2BA6NNL0 878 aaPredicted RBP19.06■□□□□ 0.64
ERCC3-209ENST00000494464 NUTM2EB1AL46 878 aaPredicted RBP19.06■□□□□ 0.64
ERCC3-209ENST00000494464 FOXO3O43524 673 aa19.06■□□□□ 0.64
ERCC3-209ENST00000494464 NUTM2AQ8IVF1 878 aaPredicted RBP19.06■□□□□ 0.64
ERCC3-209ENST00000494464 TRPM1Q7Z4N2 1603 aa19.06■□□□□ 0.64
ERCC3-209ENST00000494464 ITSN1Q15811 1721 aa19.06■□□□□ 0.64
ERCC3-209ENST00000494464 MARF1Q9Y4F3 1742 aaKnown RBP19.05■□□□□ 0.64
ERCC3-209ENST00000494464 ZNF772Q68DY9 489 aaPredicted RBP19.05■□□□□ 0.64
ERCC3-209ENST00000494464 L3MBTL2Q969R5 705 aa19.04■□□□□ 0.64
ERCC3-209ENST00000494464 PHF8Q9UPP1 1060 aa19.04■□□□□ 0.64
ERCC3-209ENST00000494464 SIN3AQ96ST3 1273 aa19.03■□□□□ 0.64
ERCC3-209ENST00000494464 MINK1Q8N4C8 1332 aaPredicted RBP19.02■□□□□ 0.64
ERCC3-209ENST00000494464 ATP7BP35670 1465 aa19.02■□□□□ 0.64
ERCC3-209ENST00000494464 HIRIP3Q9BW71 556 aaPredicted RBP19.02■□□□□ 0.64
ERCC3-209ENST00000494464 TNS3Q68CZ2 1445 aa19.02■□□□□ 0.63
ERCC3-209ENST00000494464 WASLO00401 505 aaPredicted RBP19.01■□□□□ 0.63
ERCC3-209ENST00000494464 XPCQ01831 940 aaPredicted RBP19.01■□□□□ 0.63
ERCC3-209ENST00000494464 TOPAZ1Q8N9V7 1692 aa19.01■□□□□ 0.63
ERCC3-209ENST00000494464 TRPM3Q9HCF6 1732 aaPredicted RBP19.01■□□□□ 0.63
ERCC3-209ENST00000494464 NBPF1Q3BBV0 1214 aa19■□□□□ 0.63
ERCC3-209ENST00000494464 AFF2P51816 1311 aa19■□□□□ 0.63
ERCC3-209ENST00000494464 SPATA31A3Q5VYP0 1347 aa19■□□□□ 0.63
ERCC3-209ENST00000494464 PRR36Q9H6K5 1346 aa19■□□□□ 0.63
ERCC3-209ENST00000494464 QRICH2Q9H0J4 1663 aa18.99■□□□□ 0.63
ERCC3-209ENST00000494464 SBNO1A3KN83 1393 aa18.99■□□□□ 0.63
ERCC3-209ENST00000494464 ABCA3Q99758 1704 aa18.99■□□□□ 0.63
ERCC3-209ENST00000494464 KRT28Q7Z3Y7 464 aa18.98■□□□□ 0.63
ERCC3-209ENST00000494464 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
ERCC3-209ENST00000494464 C8orf37Q96NL8 207 aa18.97■□□□□ 0.63
ERCC3-209ENST00000494464 ALS2Q96Q42 1657 aa18.97■□□□□ 0.63
ERCC3-209ENST00000494464 PSME1Q06323 249 aa18.96■□□□□ 0.63
ERCC3-209ENST00000494464 NEUROD1Q13562 356 aa18.96■□□□□ 0.63
ERCC3-209ENST00000494464 ADAMTS2O95450 1211 aa18.95■□□□□ 0.62
ERCC3-209ENST00000494464 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.94■□□□□ 0.62
ERCC3-209ENST00000494464 ARHGEF10O15013 1369 aa18.94■□□□□ 0.62
ERCC3-209ENST00000494464 PMFBP1Q8TBY8 1022 aa18.93■□□□□ 0.62
ERCC3-209ENST00000494464 CENPJQ9HC77 1338 aaPredicted RBP18.93■□□□□ 0.62
ERCC3-209ENST00000494464 NGLY1Q96IV0 654 aa18.93■□□□□ 0.62
ERCC3-209ENST00000494464 GPRASP1Q5JY77 1395 aa18.93■□□□□ 0.62
ERCC3-209ENST00000494464 ROCK2O75116 1388 aaKnown RBP18.92■□□□□ 0.62
ERCC3-209ENST00000494464 FNBP4Q8N3X1 1017 aaPredicted RBP18.92■□□□□ 0.62
ERCC3-209ENST00000494464 CRYBG1Q9Y4K1 1723 aa18.92■□□□□ 0.62
ERCC3-209ENST00000494464 NUDT16Q96DE0 195 aaKnown RBP18.91■□□□□ 0.62
ERCC3-209ENST00000494464 TONSLQ96HA7 1378 aa18.9■□□□□ 0.62
ERCC3-209ENST00000494464 RXRBP28702 533 aa18.9■□□□□ 0.62
ERCC3-209ENST00000494464 CDK19Q9BWU1 502 aa18.9■□□□□ 0.62
ERCC3-209ENST00000494464 RALGAPBQ86X10 1494 aa18.89■□□□□ 0.61
ERCC3-209ENST00000494464 ATRNO75882 1429 aa18.88■□□□□ 0.61
ERCC3-209ENST00000494464 POLR3AO14802 1390 aaPredicted RBP18.88■□□□□ 0.61
ERCC3-209ENST00000494464 PLCH1Q4KWH8 1693 aa18.88■□□□□ 0.61
ERCC3-209ENST00000494464 USP21Q9UK80 565 aa18.88■□□□□ 0.61
ERCC3-209ENST00000494464 SLIT2O94813 1529 aa18.88■□□□□ 0.61
ERCC3-209ENST00000494464 BCL9LQ86UU0 1499 aa18.88■□□□□ 0.61
ERCC3-209ENST00000494464 NWD2Q9ULI1 1742 aa18.88■□□□□ 0.61
ERCC3-209ENST00000494464 RBM6P78332 1123 aaKnown RBP18.87■□□□□ 0.61
ERCC3-209ENST00000494464 NGDNQ8NEJ9 315 aaKnown RBP18.87■□□□□ 0.61
ERCC3-209ENST00000494464 QTRT2Q9H974 415 aaKnown RBP18.87■□□□□ 0.61
ERCC3-209ENST00000494464 RGS12O14924 1447 aa18.87■□□□□ 0.61
ERCC3-209ENST00000494464 NBPF8Q3BBV2 869 aa18.86■□□□□ 0.61
ERCC3-209ENST00000494464 CCDC61Q9Y6R9 512 aa18.86■□□□□ 0.61
ERCC3-209ENST00000494464 TRPC5Q9UL62 973 aaPredicted RBP18.84■□□□□ 0.61
ERCC3-209ENST00000494464 PHRF1Q9P1Y6 1649 aaKnown RBP18.84■□□□□ 0.61
ERCC3-209ENST00000494464 PPIP5K1Q6PFW1 1433 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms