RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 TONSLQ96HA7 1378 aa33.73■■■□□ 2.99
CLIC3-203ENST00000494426 PRAM1Q96QH2 718 aa33.73■■■□□ 2.99
CLIC3-203ENST00000494426 TRPM1Q7Z4N2 1603 aa33.71■■■□□ 2.99
CLIC3-203ENST00000494426 NBPF8Q3BBV2 869 aa33.7■■■□□ 2.99
CLIC3-203ENST00000494426 SOCS7O14512 581 aa33.69■■■□□ 2.98
CLIC3-203ENST00000494426 CDC42BPGQ6DT37 1551 aa33.68■■■□□ 2.98
CLIC3-203ENST00000494426 ARHGEF28Q8N1W1 1705 aaKnown RBP33.68■■■□□ 2.98
CLIC3-203ENST00000494426 CLSPNQ9HAW4 1339 aa33.68■■■□□ 2.98
CLIC3-203ENST00000494426 SAFB2Q14151 953 aaKnown RBP eCLIP33.66■■■□□ 2.98
CLIC3-203ENST00000494426 ILDR2Q71H61 639 aa33.65■■■□□ 2.98
CLIC3-203ENST00000494426 POGKQ9P215 609 aa33.65■■■□□ 2.98
CLIC3-203ENST00000494426 C1orf167Q5SNV9 1468 aa33.64■■■□□ 2.98
CLIC3-203ENST00000494426 BRINP3Q76B58 766 aa33.64■■■□□ 2.98
CLIC3-203ENST00000494426 DISP3Q9P2K9 1392 aa33.6■■■□□ 2.97
CLIC3-203ENST00000494426 FMN2Q9NZ56 1722 aa33.59■■■□□ 2.97
CLIC3-203ENST00000494426 CCER1Q8TC90 406 aaPredicted RBP33.59■■■□□ 2.97
CLIC3-203ENST00000494426 PHLPP1O60346 1717 aa33.57■■■□□ 2.96
CLIC3-203ENST00000494426 ADGRB2O60241 1585 aa33.56■■■□□ 2.96
CLIC3-203ENST00000494426 AHDC1Q5TGY3 1603 aaPredicted RBP33.55■■■□□ 2.96
CLIC3-203ENST00000494426 ORAI2Q96SN7 254 aa33.55■■■□□ 2.96
CLIC3-203ENST00000494426 MINK1Q8N4C8 1332 aaPredicted RBP33.54■■■□□ 2.96
CLIC3-203ENST00000494426 ROCK2O75116 1388 aaKnown RBP33.54■■■□□ 2.96
CLIC3-203ENST00000494426 NUTM2FA1L443 756 aa33.53■■■□□ 2.96
CLIC3-203ENST00000494426 HIRIP3Q9BW71 556 aaPredicted RBP33.53■■■□□ 2.96
CLIC3-203ENST00000494426 GPRASP1Q5JY77 1395 aa33.52■■■□□ 2.96
CLIC3-203ENST00000494426 NHSL1Q5SYE7 1610 aa33.52■■■□□ 2.96
CLIC3-203ENST00000494426 COL16A1Q07092 1604 aaPredicted RBP33.51■■■□□ 2.96
CLIC3-203ENST00000494426 RGPD8O14715 1765 aaPredicted RBP33.5■■■□□ 2.95
CLIC3-203ENST00000494426 RALGAPBQ86X10 1494 aa33.49■■■□□ 2.95
CLIC3-203ENST00000494426 DDX17Q92841 729 aaKnown RBP33.48■■■□□ 2.95
CLIC3-203ENST00000494426 TIMELESSQ9UNS1 1208 aa33.48■■■□□ 2.95
CLIC3-203ENST00000494426 ESCO1Q5FWF5 840 aa33.47■■■□□ 2.95
CLIC3-203ENST00000494426 USP32Q8NFA0 1604 aa33.46■■■□□ 2.95
CLIC3-203ENST00000494426 WASLO00401 505 aaPredicted RBP33.44■■■□□ 2.94
CLIC3-203ENST00000494426 CENPJQ9HC77 1338 aaPredicted RBP33.44■■■□□ 2.94
CLIC3-203ENST00000494426 QRICH2Q9H0J4 1663 aa33.41■■■□□ 2.94
CLIC3-203ENST00000494426 CARD11Q9BXL7 1154 aa33.4■■■□□ 2.94
CLIC3-203ENST00000494426 ANKARQ7Z5J8 1434 aa33.39■■■□□ 2.94
CLIC3-203ENST00000494426 PRR36Q9H6K5 1346 aa33.39■■■□□ 2.94
CLIC3-203ENST00000494426 TULP4Q9NRJ4 1543 aa33.38■■■□□ 2.93
CLIC3-203ENST00000494426 KIF1AQ12756 1690 aa33.36■■■□□ 2.93
CLIC3-203ENST00000494426 SOS2Q07890 1332 aaPredicted RBP33.35■■■□□ 2.93
CLIC3-203ENST00000494426 CDK19Q9BWU1 502 aa33.35■■■□□ 2.93
CLIC3-203ENST00000494426 JCADQ9P266 1359 aa33.34■■■□□ 2.93
CLIC3-203ENST00000494426 FOXO3O43524 673 aa33.34■■■□□ 2.93
CLIC3-203ENST00000494426 EIF3AQ14152 1382 aaKnown RBP33.34■■■□□ 2.93
CLIC3-203ENST00000494426 PHF8Q9UPP1 1060 aa33.33■■■□□ 2.93
CLIC3-203ENST00000494426 NPHP3Q7Z494 1330 aa33.3■■■□□ 2.92
CLIC3-203ENST00000494426 MED1Q15648 1581 aaPredicted RBP33.3■■■□□ 2.92
CLIC3-203ENST00000494426 SHPRHQ149N8 1683 aa33.3■■■□□ 2.92
CLIC3-203ENST00000494426 LRRC59Q96AG4 307 aaKnown RBP33.3■■■□□ 2.92
CLIC3-203ENST00000494426 ATP7BP35670 1465 aa33.3■■■□□ 2.92
CLIC3-203ENST00000494426 PXDNQ92626 1479 aa33.3■■■□□ 2.92
CLIC3-203ENST00000494426 NUDT16Q96DE0 195 aaKnown RBP33.29■■■□□ 2.92
CLIC3-203ENST00000494426 XPCQ01831 940 aaPredicted RBP33.27■■■□□ 2.92
CLIC3-203ENST00000494426 PMFBP1Q8TBY8 1022 aa33.27■■■□□ 2.92
CLIC3-203ENST00000494426 ITSN1Q15811 1721 aa33.24■■■□□ 2.91
CLIC3-203ENST00000494426 TOPAZ1Q8N9V7 1692 aa33.23■■■□□ 2.91
CLIC3-203ENST00000494426 CABP2Q9NPB3 220 aa33.22■■■□□ 2.91
CLIC3-203ENST00000494426 PNPLA6Q8IY17 1366 aa33.21■■■□□ 2.91
CLIC3-203ENST00000494426 KRT28Q7Z3Y7 464 aa33.21■■■□□ 2.91
CLIC3-203ENST00000494426 SRPK2P78362 688 aaKnown RBP33.2■■■□□ 2.91
CLIC3-203ENST00000494426 SBNO2Q9Y2G9 1366 aa33.2■■■□□ 2.9
CLIC3-203ENST00000494426 CCDC61Q9Y6R9 512 aa33.19■■■□□ 2.9
CLIC3-203ENST00000494426 SPATA31A6Q5VVP1 1343 aa33.19■■■□□ 2.9
CLIC3-203ENST00000494426 EVC2Q86UK5 1308 aa33.19■■■□□ 2.9
CLIC3-203ENST00000494426 LRP6O75581 1613 aa33.17■■■□□ 2.9
CLIC3-203ENST00000494426 ST20-MTHFSA0A0A6YYL1 179 aa33.15■■■□□ 2.9
CLIC3-203ENST00000494426 PSME1Q06323 249 aa33.15■■■□□ 2.9
CLIC3-203ENST00000494426 PLEKHG3A1L390 1219 aa33.14■■■□□ 2.9
CLIC3-203ENST00000494426 SPATA31A3Q5VYP0 1347 aa33.13■■■□□ 2.89
CLIC3-203ENST00000494426 COL22A1Q8NFW1 1626 aaPredicted RBP33.13■■■□□ 2.89
CLIC3-203ENST00000494426 USP47Q96K76 1375 aa33.12■■■□□ 2.89
CLIC3-203ENST00000494426 TRPM3Q9HCF6 1732 aaPredicted RBP33.12■■■□□ 2.89
CLIC3-203ENST00000494426 NGDNQ8NEJ9 315 aaKnown RBP33.12■■■□□ 2.89
CLIC3-203ENST00000494426 TESK2Q96S53 571 aa33.12■■■□□ 2.89
CLIC3-203ENST00000494426 PPIP5K1Q6PFW1 1433 aa33.11■■■□□ 2.89
CLIC3-203ENST00000494426 SBNO1A3KN83 1393 aa33.1■■■□□ 2.89
CLIC3-203ENST00000494426 POLR3AO14802 1390 aaPredicted RBP33.09■■■□□ 2.89
CLIC3-203ENST00000494426 ACEP12821 1306 aa33.09■■■□□ 2.89
CLIC3-203ENST00000494426 NUTM2BA6NNL0 878 aaPredicted RBP33.09■■■□□ 2.89
CLIC3-203ENST00000494426 NUTM2EB1AL46 878 aaPredicted RBP33.09■■■□□ 2.89
CLIC3-203ENST00000494426 NUTM2AQ8IVF1 878 aaPredicted RBP33.09■■■□□ 2.89
CLIC3-203ENST00000494426 TNS3Q68CZ2 1445 aa33.07■■■□□ 2.88
CLIC3-203ENST00000494426 CABP1Q9NZU7 370 aa33.06■■■□□ 2.88
CLIC3-203ENST00000494426 ALS2Q96Q42 1657 aa33.03■■■□□ 2.88
CLIC3-203ENST00000494426 RGS17Q9UGC6 210 aaPredicted RBP33.01■■■□□ 2.87
CLIC3-203ENST00000494426 ATAD2Q6PL18 1390 aa33■■■□□ 2.87
CLIC3-203ENST00000494426 PHF23Q9BUL5 403 aaPredicted RBP33■■■□□ 2.87
CLIC3-203ENST00000494426 MEX3CQ5U5Q3 659 aaKnown RBP32.97■■■□□ 2.87
CLIC3-203ENST00000494426 PUS7Q96PZ0 661 aaKnown RBP32.97■■■□□ 2.87
CLIC3-203ENST00000494426 ARHGEF10O15013 1369 aa32.96■■■□□ 2.87
CLIC3-203ENST00000494426 LMOD2Q6P5Q4 547 aa32.96■■■□□ 2.87
CLIC3-203ENST00000494426 SLC24A1O60721 1099 aa32.95■■■□□ 2.87
CLIC3-203ENST00000494426 PAK3O75914 559 aaPredicted RBP32.95■■■□□ 2.87
CLIC3-203ENST00000494426 ADAMTS2O95450 1211 aa32.94■■■□□ 2.86
CLIC3-203ENST00000494426 AKAP12Q02952 1782 aa32.93■■■□□ 2.86
CLIC3-203ENST00000494426 CABLES1Q8TDN4 633 aa32.93■■■□□ 2.86
CLIC3-203ENST00000494426 ABCA3Q99758 1704 aa32.92■■■□□ 2.86
CLIC3-203ENST00000494426 MARF1Q9Y4F3 1742 aaKnown RBP32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms