RNA–Protein interactions for RNA: ENST00000494300.1

NXF3-206, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-206ENST00000494300 COLQQ9Y215 455 aaPredicted RBP8.88□□□□□ -0.99
NXF3-206ENST00000494300 ZMYM3Q14202 1370 aa8.87□□□□□ -0.99
NXF3-206ENST00000494300 CEBPAP49715 358 aaPredicted RBP8.87□□□□□ -0.99
NXF3-206ENST00000494300 IRX5P78411 483 aaPredicted RBP8.87□□□□□ -0.99
NXF3-206ENST00000494300 LHX8Q68G74 356 aa8.87□□□□□ -0.99
NXF3-206ENST00000494300 KCTD17Q8N5Z5 321 aa8.87□□□□□ -0.99
NXF3-206ENST00000494300 ACIN1Q9UKV3 1341 aaKnown RBP8.86□□□□□ -0.99
NXF3-206ENST00000494300 NKX1-1Q15270 411 aaPredicted RBP8.86□□□□□ -0.99
NXF3-206ENST00000494300 ZC3H15Q8WU90 426 aaKnown RBP8.86□□□□□ -0.99
NXF3-206ENST00000494300 TRIM52Q96A61 297 aa8.86□□□□□ -0.99
NXF3-206ENST00000494300 OCEL1Q9H607 264 aa8.86□□□□□ -0.99
NXF3-206ENST00000494300 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.86□□□□□ -0.99
NXF3-206ENST00000494300 RNF17Q9BXT8 1623 aaKnown RBP8.86□□□□□ -0.99
NXF3-206ENST00000494300 CLTCQ00610 1675 aaKnown RBP8.85□□□□□ -0.99
NXF3-206ENST00000494300 POTEFA5A3E0 1075 aa8.85□□□□□ -0.99
NXF3-206ENST00000494300 GTPBP6O43824 516 aaPredicted RBP8.85□□□□□ -0.99
NXF3-206ENST00000494300 SLC24A3Q9HC58 644 aa8.85□□□□□ -0.99
NXF3-206ENST00000494300 HFM1A2PYH4 1435 aa8.85□□□□□ -0.99
NXF3-206ENST00000494300 NUP155O75694 1391 aa8.85□□□□□ -0.99
NXF3-206ENST00000494300 PRDM15P57071 1507 aaPredicted RBP8.85□□□□□ -0.99
NXF3-206ENST00000494300 ZC3H13Q5T200 1668 aaKnown RBP8.85□□□□□ -0.99
NXF3-206ENST00000494300 NPATQ14207 1427 aa8.84□□□□□ -0.99
NXF3-206ENST00000494300 UHRF1BP1Q6BDS2 1440 aa8.84□□□□□ -0.99
NXF3-206ENST00000494300 MROH2AA6NES4 1674 aa8.84□□□□□ -0.99
NXF3-206ENST00000494300 ABCC3O15438 1527 aa8.84□□□□□ -0.99
NXF3-206ENST00000494300 NAIPQ13075 1403 aa8.83□□□□□ -1
NXF3-206ENST00000494300 POTEB2H3BUK9 544 aa8.83□□□□□ -1
NXF3-206ENST00000494300 RAD21O60216 631 aa8.83□□□□□ -1
NXF3-206ENST00000494300 APBB1O00213 710 aa8.82□□□□□ -1
NXF3-206ENST00000494300 DEPDC5O75140 1603 aa8.82□□□□□ -1
NXF3-206ENST00000494300 TNRQ92752 1358 aa8.82□□□□□ -1
NXF3-206ENST00000494300 PZPP20742 1482 aa8.82□□□□□ -1
NXF3-206ENST00000494300 C3P01024 1663 aa8.81□□□□□ -1
NXF3-206ENST00000494300 SETD5Q9C0A6 1442 aa8.81□□□□□ -1
NXF3-206ENST00000494300 SOX12O15370 315 aa8.81□□□□□ -1
NXF3-206ENST00000494300 GCC2Q8IWJ2 1684 aa8.81□□□□□ -1
NXF3-206ENST00000494300 MROH1Q8NDA8 1641 aa8.8□□□□□ -1
NXF3-206ENST00000494300 FBXO31Q5XUX0 539 aaPredicted RBP8.8□□□□□ -1
NXF3-206ENST00000494300 PDCD7Q8N8D1 485 aaKnown RBP8.8□□□□□ -1
NXF3-206ENST00000494300 UNC13BO14795 1591 aa8.8□□□□□ -1
NXF3-206ENST00000494300 CAMSAP1Q5T5Y3 1602 aa8.8□□□□□ -1
NXF3-206ENST00000494300 LMTK2Q8IWU2 1503 aa8.8□□□□□ -1
NXF3-206ENST00000494300 ARHGAP31Q2M1Z3 1444 aa8.8□□□□□ -1
NXF3-206ENST00000494300 TRAIPQ9BWF2 469 aa8.79□□□□□ -1
NXF3-206ENST00000494300 PHF8Q9UPP1 1060 aa8.79□□□□□ -1
NXF3-206ENST00000494300 CEP152O94986 1710 aa8.79□□□□□ -1
NXF3-206ENST00000494300 PREX1Q8TCU6 1659 aa8.78□□□□□ -1
NXF3-206ENST00000494300 RPRD2Q5VT52 1461 aaKnown RBP8.78□□□□□ -1
NXF3-206ENST00000494300 MTMR7Q9Y216 660 aa8.78□□□□□ -1
NXF3-206ENST00000494300 EFCAB6Q5THR3 1501 aa8.78□□□□□ -1
NXF3-206ENST00000494300 VWDEQ8N2E2 1590 aa8.78□□□□□ -1
NXF3-206ENST00000494300 ERVK-7P63135 1459 aa8.77□□□□□ -1
NXF3-206ENST00000494300 NLRP1Q9C000 1473 aa8.77□□□□□ -1
NXF3-206ENST00000494300 HSPA2P54652 639 aa8.77□□□□□ -1.01
NXF3-206ENST00000494300 ILDR1Q86SU0 546 aaPredicted RBP8.77□□□□□ -1.01
NXF3-206ENST00000494300 TET3O43151 1660 aa8.77□□□□□ -1.01
NXF3-206ENST00000494300 IQGAP3Q86VI3 1631 aa8.76□□□□□ -1.01
NXF3-206ENST00000494300 RAB3GAP2Q9H2M9 1393 aa8.76□□□□□ -1.01
NXF3-206ENST00000494300 SETD1BQ9UPS6 1966 aaKnown RBP8.76□□□□□ -1.01
NXF3-206ENST00000494300 POTEJP0CG39 1038 aa8.76□□□□□ -1.01
NXF3-206ENST00000494300 NLRP6P59044 892 aa8.76□□□□□ -1.01
NXF3-206ENST00000494300 DPY19L2Q6NUT2 758 aa8.76□□□□□ -1.01
NXF3-206ENST00000494300 THEMISQ8N1K5 641 aaPredicted RBP8.76□□□□□ -1.01
NXF3-206ENST00000494300 SLC52A1Q9NWF4 448 aa8.76□□□□□ -1.01
NXF3-206ENST00000494300 A2ML1A8K2U0 1454 aa8.76□□□□□ -1.01
NXF3-206ENST00000494300 LMTK3Q96Q04 1460 aa8.76□□□□□ -1.01
NXF3-206ENST00000494300 SPATA31D1Q6ZQQ2 1576 aa8.75□□□□□ -1.01
NXF3-206ENST00000494300 MAMSTRQ6ZN01 415 aa8.75□□□□□ -1.01
NXF3-206ENST00000494300 KCNV2Q8TDN2 545 aa8.75□□□□□ -1.01
NXF3-206ENST00000494300 ZNF428Q96B54 188 aa8.75□□□□□ -1.01
NXF3-206ENST00000494300 L3MBTL3Q96JM7 780 aaPredicted RBP8.75□□□□□ -1.01
NXF3-206ENST00000494300 MFRPQ9BY79 579 aa8.75□□□□□ -1.01
NXF3-206ENST00000494300 SCUBE2Q9NQ36 999 aa8.75□□□□□ -1.01
NXF3-206ENST00000494300 MYO3AQ8NEV4 1616 aa8.75□□□□□ -1.01
NXF3-206ENST00000494300 CEP170BQ9Y4F5 1589 aaPredicted RBP8.74□□□□□ -1.01
NXF3-206ENST00000494300 G3V3G9 751 aa8.74□□□□□ -1.01
NXF3-206ENST00000494300 EID1Q9Y6B2 187 aa8.74□□□□□ -1.01
NXF3-206ENST00000494300 HDGFP51858 240 aaKnown RBP8.73□□□□□ -1.01
NXF3-206ENST00000494300 MPHOSPH9Q99550 1183 aa8.73□□□□□ -1.01
NXF3-206ENST00000494300 UGGT1Q9NYU2 1555 aa8.73□□□□□ -1.01
NXF3-206ENST00000494300 PPP1R15AO75807 674 aaPredicted RBP8.72□□□□□ -1.01
NXF3-206ENST00000494300 ANKLE2Q86XL3 938 aa8.72□□□□□ -1.01
NXF3-206ENST00000494300 FBXO22Q8NEZ5 403 aa8.72□□□□□ -1.01
NXF3-206ENST00000494300 OTUD5Q96G74 571 aa8.72□□□□□ -1.01
NXF3-206ENST00000494300 MS4A4AQ96JQ5 239 aa8.72□□□□□ -1.01
NXF3-206ENST00000494300 NOS1P29475 1434 aa8.71□□□□□ -1.01
NXF3-206ENST00000494300 IDI1Q13907 227 aa8.71□□□□□ -1.02
NXF3-206ENST00000494300 ZNF326Q5BKZ1 582 aaKnown RBP8.71□□□□□ -1.02
NXF3-206ENST00000494300 CCDC82Q8N4S0 544 aa8.71□□□□□ -1.02
NXF3-206ENST00000494300 BOLA1Q9Y3E2 137 aa8.71□□□□□ -1.02
NXF3-206ENST00000494300 ZNF142P52746 1687 aaPredicted RBP8.71□□□□□ -1.02
NXF3-206ENST00000494300 CFAP65Q6ZU64 1925 aaKnown RBP8.7□□□□□ -1.02
NXF3-206ENST00000494300 E9PCH4 1651 aa8.7□□□□□ -1.02
NXF3-206ENST00000494300 C3orf67Q6ZVT6 689 aa8.7□□□□□ -1.02
NXF3-206ENST00000494300 CCDC144AA2RUR9 1427 aa8.7□□□□□ -1.02
NXF3-206ENST00000494300 PLA2R1Q13018 1463 aa8.7□□□□□ -1.02
NXF3-206ENST00000494300 FOXD4L5Q5VV16 416 aaPredicted RBP8.69□□□□□ -1.02
NXF3-206ENST00000494300 TXNDC2Q86VQ3 553 aa8.69□□□□□ -1.02
NXF3-206ENST00000494300 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.69□□□□□ -1.02
NXF3-206ENST00000494300 FOXD4L4Q8WXT5 416 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms