RNA–Protein interactions for RNA: ENST00000494276.1

ZNF561-219, Transcript of zinc finger protein 561, humanhuman

TSL 3

Gene ZNF561, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-219ENST00000494276 REPIN1Q9BWE0 567 aaKnown RBP8.97□□□□□ -0.97
ZNF561-219ENST00000494276 GMPRP36959 345 aa8.96□□□□□ -0.98
ZNF561-219ENST00000494276 FUT2Q10981 343 aa8.96□□□□□ -0.98
ZNF561-219ENST00000494276 SUZ12Q15022 739 aaKnown RBP8.96□□□□□ -0.98
ZNF561-219ENST00000494276 ARHGEF1Q92888 912 aaKnown RBP8.96□□□□□ -0.98
ZNF561-219ENST00000494276 SLC27A5Q9Y2P5 690 aa8.96□□□□□ -0.98
ZNF561-219ENST00000494276 NPAS3Q8IXF0 933 aa8.95□□□□□ -0.98
ZNF561-219ENST00000494276 HPS1Q92902 700 aa8.95□□□□□ -0.98
ZNF561-219ENST00000494276 PRDM9Q9NQV7 894 aa8.95□□□□□ -0.98
ZNF561-219ENST00000494276 FECHP22830 423 aa8.94□□□□□ -0.98
ZNF561-219ENST00000494276 MSS51Q4VC12 460 aa8.94□□□□□ -0.98
ZNF561-219ENST00000494276 BRICD5Q6PL45 260 aa8.94□□□□□ -0.98
ZNF561-219ENST00000494276 METTL3Q86U44 580 aaKnown RBP8.92□□□□□ -0.98
ZNF561-219ENST00000494276 DDX11L8A8MPP1 907 aa8.91□□□□□ -0.98
ZNF561-219ENST00000494276 GRIPAP1Q4V328 841 aa8.91□□□□□ -0.98
ZNF561-219ENST00000494276 CFAP44Q96MT7 982 aa8.91□□□□□ -0.98
ZNF561-219ENST00000494276 DAXXQ9UER7 740 aaPredicted RBP8.91□□□□□ -0.98
ZNF561-219ENST00000494276 GCGRP47871 477 aa8.88□□□□□ -0.99
ZNF561-219ENST00000494276 Q3C1V9 767 aa8.88□□□□□ -0.99
ZNF561-219ENST00000494276 PAXIP1Q6ZW49 1069 aaPredicted RBP8.88□□□□□ -0.99
ZNF561-219ENST00000494276 SULF1Q8IWU6 871 aa8.88□□□□□ -0.99
ZNF561-219ENST00000494276 RC3H1Q5TC82 1133 aaKnown RBP8.87□□□□□ -0.99
ZNF561-219ENST00000494276 H3BM21 787 aa8.86□□□□□ -0.99
ZNF561-219ENST00000494276 ALDH1A1P00352 501 aa8.86□□□□□ -0.99
ZNF561-219ENST00000494276 VEGFBP49765 207 aa8.85□□□□□ -0.99
ZNF561-219ENST00000494276 MMP16P51512 607 aa8.85□□□□□ -0.99
ZNF561-219ENST00000494276 WNT7BP56706 349 aa8.85□□□□□ -0.99
ZNF561-219ENST00000494276 HIC1Q14526 733 aa8.85□□□□□ -0.99
ZNF561-219ENST00000494276 RNF19BQ6ZMZ0 732 aa8.85□□□□□ -0.99
ZNF561-219ENST00000494276 CCDC24Q8N4L8 307 aa8.83□□□□□ -1
ZNF561-219ENST00000494276 CAPN5O15484 640 aaPredicted RBP8.82□□□□□ -1
ZNF561-219ENST00000494276 BMP1P13497 986 aa8.81□□□□□ -1
ZNF561-219ENST00000494276 ERBB4Q15303 1308 aa8.8□□□□□ -1
ZNF561-219ENST00000494276 USB1Q9BQ65 265 aaKnown RBP8.8□□□□□ -1
ZNF561-219ENST00000494276 WASF2Q9Y6W5 498 aa8.8□□□□□ -1
ZNF561-219ENST00000494276 DXOO77932 396 aaKnown RBP8.79□□□□□ -1
ZNF561-219ENST00000494276 TRIM46Q7Z4K8 759 aa8.79□□□□□ -1
ZNF561-219ENST00000494276 KCNV2Q8TDN2 545 aa8.79□□□□□ -1
ZNF561-219ENST00000494276 SKOR1P84550 965 aa8.78□□□□□ -1
ZNF561-219ENST00000494276 GSK3AP49840 483 aa8.77□□□□□ -1.01
ZNF561-219ENST00000494276 KCNMA1Q12791 1236 aa8.77□□□□□ -1.01
ZNF561-219ENST00000494276 KCTD17Q8N5Z5 321 aa8.77□□□□□ -1.01
ZNF561-219ENST00000494276 GNPATO15228 680 aa8.75□□□□□ -1.01
ZNF561-219ENST00000494276 EHBP1Q8NDI1 1231 aa8.75□□□□□ -1.01
ZNF561-219ENST00000494276 NLRP7Q8WX94 980 aa8.75□□□□□ -1.01
ZNF561-219ENST00000494276 TMEM151AQ8N4L1 468 aa8.73□□□□□ -1.01
ZNF561-219ENST00000494276 ZFP42Q96MM3 310 aa8.73□□□□□ -1.01
ZNF561-219ENST00000494276 SCARF1Q14162 830 aa8.72□□□□□ -1.01
ZNF561-219ENST00000494276 SIAH2O43255 324 aa8.71□□□□□ -1.02
ZNF561-219ENST00000494276 SLC24A1O60721 1099 aa8.71□□□□□ -1.02
ZNF561-219ENST00000494276 SEMA3EO15041 775 aa8.69□□□□□ -1.02
ZNF561-219ENST00000494276 GDF11O95390 407 aa8.69□□□□□ -1.02
ZNF561-219ENST00000494276 VSIG8P0DPA2 414 aa8.69□□□□□ -1.02
ZNF561-219ENST00000494276 RNF225M0QZC1 329 aaPredicted RBP8.68□□□□□ -1.02
ZNF561-219ENST00000494276 KDM4AO75164 1064 aa8.68□□□□□ -1.02
ZNF561-219ENST00000494276 P3H3Q8IVL6 736 aa8.68□□□□□ -1.02
ZNF561-219ENST00000494276 USP46P62068 366 aa8.67□□□□□ -1.02
ZNF561-219ENST00000494276 SMYD5Q6GMV2 418 aa8.67□□□□□ -1.02
ZNF561-219ENST00000494276 JUNDP17535 347 aa8.66□□□□□ -1.02
ZNF561-219ENST00000494276 RASSF7Q02833 373 aa8.66□□□□□ -1.02
ZNF561-219ENST00000494276 MRPL14Q6P1L8 145 aaKnown RBP8.66□□□□□ -1.02
ZNF561-219ENST00000494276 PLEKHG3A1L390 1219 aa8.65□□□□□ -1.02
ZNF561-219ENST00000494276 RBM26Q5T8P6 1007 aaKnown RBP8.65□□□□□ -1.02
ZNF561-219ENST00000494276 PHOX2BQ99453 314 aa8.65□□□□□ -1.02
ZNF561-219ENST00000494276 CD46P15529 392 aa8.64□□□□□ -1.03
ZNF561-219ENST00000494276 PURBQ96QR8 312 aaKnown RBP8.64□□□□□ -1.03
ZNF561-219ENST00000494276 NUDT12Q9BQG2 462 aa8.64□□□□□ -1.03
ZNF561-219ENST00000494276 MAN1A2O60476 641 aa8.61□□□□□ -1.03
ZNF561-219ENST00000494276 SH3BP2P78314 561 aa8.61□□□□□ -1.03
ZNF561-219ENST00000494276 PTCRAQ6ISU1 281 aaPredicted RBP8.61□□□□□ -1.03
ZNF561-219ENST00000494276 SOBPA7XYQ1 873 aa8.6□□□□□ -1.03
ZNF561-219ENST00000494276 NNTQ13423 1086 aa8.6□□□□□ -1.03
ZNF561-219ENST00000494276 GPR37O15354 613 aa8.58□□□□□ -1.04
ZNF561-219ENST00000494276 HOXA2O43364 376 aa8.58□□□□□ -1.04
ZNF561-219ENST00000494276 ADH1CP00326 375 aa8.58□□□□□ -1.04
ZNF561-219ENST00000494276 WDR4P57081 412 aaKnown RBP8.58□□□□□ -1.04
ZNF561-219ENST00000494276 HLA-CQ95604 372 aa8.58□□□□□ -1.04
ZNF561-219ENST00000494276 TSHZ2Q9NRE2 1034 aa8.58□□□□□ -1.04
ZNF561-219ENST00000494276 VARSP26640 1264 aaKnown RBP8.57□□□□□ -1.04
ZNF561-219ENST00000494276 RETREG3Q86VR2 466 aa8.57□□□□□ -1.04
ZNF561-219ENST00000494276 ADAMTS8Q9UP79 889 aa8.57□□□□□ -1.04
ZNF561-219ENST00000494276 TLL2Q9Y6L7 1015 aa8.57□□□□□ -1.04
ZNF561-219ENST00000494276 TESPA1A2RU30 521 aaPredicted RBP8.56□□□□□ -1.04
ZNF561-219ENST00000494276 PPFIA3O75145 1194 aa8.56□□□□□ -1.04
ZNF561-219ENST00000494276 IGHA1P01876 353 aa8.56□□□□□ -1.04
ZNF561-219ENST00000494276 CCNYL3P0C7X3 344 aa8.56□□□□□ -1.04
ZNF561-219ENST00000494276 TIMP2P16035 220 aa8.56□□□□□ -1.04
ZNF561-219ENST00000494276 MPNDQ8N594 471 aa8.56□□□□□ -1.04
ZNF561-219ENST00000494276 MS4A1P11836 297 aa8.55□□□□□ -1.04
ZNF561-219ENST00000494276 GPAT2Q6NUI2 795 aa8.55□□□□□ -1.04
ZNF561-219ENST00000494276 SYMPKQ92797 1274 aaKnown RBP8.55□□□□□ -1.04
ZNF561-219ENST00000494276 UPP2O95045 317 aa8.53□□□□□ -1.04
ZNF561-219ENST00000494276 GUCA2AQ02747 115 aa8.53□□□□□ -1.04
ZNF561-219ENST00000494276 LINC01559Q495D7 138 aa8.53□□□□□ -1.04
ZNF561-219ENST00000494276 BAP1Q92560 729 aa8.53□□□□□ -1.04
ZNF561-219ENST00000494276 UNC93B1Q9H1C4 597 aa8.53□□□□□ -1.04
ZNF561-219ENST00000494276 DNMT3AQ9Y6K1 912 aaPredicted RBP8.53□□□□□ -1.04
ZNF561-219ENST00000494276 PLCB2Q00722 1185 aa8.52□□□□□ -1.05
ZNF561-219ENST00000494276 C6orf118Q5T5N4 469 aa8.52□□□□□ -1.05
ZNF561-219ENST00000494276 CNTNAP3BQ96NU0 1288 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms