RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 DLC1Q96QB1 1528 aa32.9■■■□□ 2.86
SNIP1-203ENST00000493916 NHSL1Q5SYE7 1610 aa32.88■■■□□ 2.85
SNIP1-203ENST00000493916 JCADQ9P266 1359 aa32.85■■■□□ 2.85
SNIP1-203ENST00000493916 KIAA1210Q9ULL0 1709 aa32.81■■■□□ 2.84
SNIP1-203ENST00000493916 PRAM1Q96QH2 718 aa32.78■■■□□ 2.84
SNIP1-203ENST00000493916 SHPRHQ149N8 1683 aa32.78■■■□□ 2.84
SNIP1-203ENST00000493916 FMN2Q9NZ56 1722 aa32.77■■■□□ 2.84
SNIP1-203ENST00000493916 SIN3AQ96ST3 1273 aa32.75■■■□□ 2.83
SNIP1-203ENST00000493916 ORAI2Q96SN7 254 aa32.74■■■□□ 2.83
SNIP1-203ENST00000493916 ADGRB2O60241 1585 aa32.74■■■□□ 2.83
SNIP1-203ENST00000493916 TRAK1Q9UPV9 953 aa32.73■■■□□ 2.83
SNIP1-203ENST00000493916 POGKQ9P215 609 aa32.72■■■□□ 2.83
SNIP1-203ENST00000493916 L3MBTL2Q969R5 705 aa32.71■■■□□ 2.83
SNIP1-203ENST00000493916 SPATA31A6Q5VVP1 1343 aa32.71■■■□□ 2.83
SNIP1-203ENST00000493916 PHF23Q9BUL5 403 aaPredicted RBP32.7■■■□□ 2.83
SNIP1-203ENST00000493916 ARHGEF28Q8N1W1 1705 aaKnown RBP32.7■■■□□ 2.83
SNIP1-203ENST00000493916 ILDR2Q71H61 639 aa32.69■■■□□ 2.82
SNIP1-203ENST00000493916 DDX17Q92841 729 aaKnown RBP32.69■■■□□ 2.82
SNIP1-203ENST00000493916 SAFB2Q14151 953 aaKnown RBP eCLIP32.68■■■□□ 2.82
SNIP1-203ENST00000493916 NEUROD1Q13562 356 aa32.67■■■□□ 2.82
SNIP1-203ENST00000493916 ESCO1Q5FWF5 840 aa32.67■■■□□ 2.82
SNIP1-203ENST00000493916 LRRC59Q96AG4 307 aaKnown RBP32.67■■■□□ 2.82
SNIP1-203ENST00000493916 SOS2Q07890 1332 aaPredicted RBP32.66■■■□□ 2.82
SNIP1-203ENST00000493916 KIF1AQ12756 1690 aa32.65■■■□□ 2.82
SNIP1-203ENST00000493916 LRP6O75581 1613 aa32.63■■■□□ 2.81
SNIP1-203ENST00000493916 NUTM2FA1L443 756 aa32.63■■■□□ 2.81
SNIP1-203ENST00000493916 NPHP3Q7Z494 1330 aa32.62■■■□□ 2.81
SNIP1-203ENST00000493916 PXDNQ92626 1479 aa32.61■■■□□ 2.81
SNIP1-203ENST00000493916 ANKARQ7Z5J8 1434 aa32.6■■■□□ 2.81
SNIP1-203ENST00000493916 PNPLA6Q8IY17 1366 aa32.6■■■□□ 2.81
SNIP1-203ENST00000493916 NBPF1Q3BBV0 1214 aa32.6■■■□□ 2.81
SNIP1-203ENST00000493916 TRPM1Q7Z4N2 1603 aa32.58■■■□□ 2.81
SNIP1-203ENST00000493916 USP32Q8NFA0 1604 aa32.58■■■□□ 2.81
SNIP1-203ENST00000493916 EIF3AQ14152 1382 aaKnown RBP32.57■■■□□ 2.8
SNIP1-203ENST00000493916 MINK1Q8N4C8 1332 aaPredicted RBP32.56■■■□□ 2.8
SNIP1-203ENST00000493916 RGS17Q9UGC6 210 aaPredicted RBP32.56■■■□□ 2.8
SNIP1-203ENST00000493916 RGPD8O14715 1765 aaPredicted RBP32.55■■■□□ 2.8
SNIP1-203ENST00000493916 HIRIP3Q9BW71 556 aaPredicted RBP32.55■■■□□ 2.8
SNIP1-203ENST00000493916 TULP4Q9NRJ4 1543 aa32.55■■■□□ 2.8
SNIP1-203ENST00000493916 FOXO3O43524 673 aa32.54■■■□□ 2.8
SNIP1-203ENST00000493916 COL22A1Q8NFW1 1626 aaPredicted RBP32.51■■■□□ 2.8
SNIP1-203ENST00000493916 WASLO00401 505 aaPredicted RBP32.51■■■□□ 2.79
SNIP1-203ENST00000493916 PHF8Q9UPP1 1060 aa32.51■■■□□ 2.79
SNIP1-203ENST00000493916 TONSLQ96HA7 1378 aa32.48■■■□□ 2.79
SNIP1-203ENST00000493916 MEX3CQ5U5Q3 659 aaKnown RBP32.48■■■□□ 2.79
SNIP1-203ENST00000493916 NUTM2BA6NNL0 878 aaPredicted RBP32.46■■■□□ 2.79
SNIP1-203ENST00000493916 NUTM2EB1AL46 878 aaPredicted RBP32.46■■■□□ 2.79
SNIP1-203ENST00000493916 XPCQ01831 940 aaPredicted RBP32.46■■■□□ 2.79
SNIP1-203ENST00000493916 NUTM2AQ8IVF1 878 aaPredicted RBP32.46■■■□□ 2.79
SNIP1-203ENST00000493916 PRR36Q9H6K5 1346 aa32.45■■■□□ 2.78
SNIP1-203ENST00000493916 ROCK2O75116 1388 aaKnown RBP32.45■■■□□ 2.78
SNIP1-203ENST00000493916 CENPJQ9HC77 1338 aaPredicted RBP32.43■■■□□ 2.78
SNIP1-203ENST00000493916 ATP7BP35670 1465 aa32.42■■■□□ 2.78
SNIP1-203ENST00000493916 ITSN1Q15811 1721 aa32.41■■■□□ 2.78
SNIP1-203ENST00000493916 NBPF8Q3BBV2 869 aa32.41■■■□□ 2.78
SNIP1-203ENST00000493916 GPRASP1Q5JY77 1395 aa32.41■■■□□ 2.78
SNIP1-203ENST00000493916 QRICH2Q9H0J4 1663 aa32.4■■■□□ 2.78
SNIP1-203ENST00000493916 KRT28Q7Z3Y7 464 aa32.4■■■□□ 2.78
SNIP1-203ENST00000493916 SOCS7O14512 581 aa32.39■■■□□ 2.78
SNIP1-203ENST00000493916 SPATA31A3Q5VYP0 1347 aa32.39■■■□□ 2.78
SNIP1-203ENST00000493916 SBNO1A3KN83 1393 aa32.38■■■□□ 2.77
SNIP1-203ENST00000493916 PSME1Q06323 249 aa32.38■■■□□ 2.77
SNIP1-203ENST00000493916 POTEAQ6S8J7 498 aa32.38■■■□□ 2.77
SNIP1-203ENST00000493916 TNS3Q68CZ2 1445 aa32.37■■■□□ 2.77
SNIP1-203ENST00000493916 PMFBP1Q8TBY8 1022 aa32.37■■■□□ 2.77
SNIP1-203ENST00000493916 PCGF6Q9BYE7 350 aa32.37■■■□□ 2.77
SNIP1-203ENST00000493916 CDK19Q9BWU1 502 aa32.36■■■□□ 2.77
SNIP1-203ENST00000493916 TOPAZ1Q8N9V7 1692 aa32.36■■■□□ 2.77
SNIP1-203ENST00000493916 RALGAPBQ86X10 1494 aa32.35■■■□□ 2.77
SNIP1-203ENST00000493916 ZNF772Q68DY9 489 aaPredicted RBP32.35■■■□□ 2.77
SNIP1-203ENST00000493916 NUDT16Q96DE0 195 aaKnown RBP32.34■■■□□ 2.77
SNIP1-203ENST00000493916 TRPM3Q9HCF6 1732 aaPredicted RBP32.32■■■□□ 2.76
SNIP1-203ENST00000493916 AFF2P51816 1311 aa32.3■■■□□ 2.76
SNIP1-203ENST00000493916 C8orf37Q96NL8 207 aa32.3■■■□□ 2.76
SNIP1-203ENST00000493916 CLSPNQ9HAW4 1339 aa32.29■■■□□ 2.76
SNIP1-203ENST00000493916 ADAMTS2O95450 1211 aa32.29■■■□□ 2.76
SNIP1-203ENST00000493916 ARHGEF10O15013 1369 aa32.29■■■□□ 2.76
SNIP1-203ENST00000493916 MARF1Q9Y4F3 1742 aaKnown RBP32.26■■■□□ 2.76
SNIP1-203ENST00000493916 NGDNQ8NEJ9 315 aaKnown RBP32.26■■■□□ 2.75
SNIP1-203ENST00000493916 CCDC61Q9Y6R9 512 aa32.26■■■□□ 2.75
SNIP1-203ENST00000493916 ALS2Q96Q42 1657 aa32.25■■■□□ 2.75
SNIP1-203ENST00000493916 POLR3AO14802 1390 aaPredicted RBP32.25■■■□□ 2.75
SNIP1-203ENST00000493916 SRPK2P78362 688 aaKnown RBP32.23■■■□□ 2.75
SNIP1-203ENST00000493916 CARD11Q9BXL7 1154 aa32.23■■■□□ 2.75
SNIP1-203ENST00000493916 PLEKHG3A1L390 1219 aa32.22■■■□□ 2.75
SNIP1-203ENST00000493916 NGLY1Q96IV0 654 aa32.22■■■□□ 2.75
SNIP1-203ENST00000493916 ABCA3Q99758 1704 aa32.22■■■□□ 2.75
SNIP1-203ENST00000493916 SBNO2Q9Y2G9 1366 aa32.2■■■□□ 2.75
SNIP1-203ENST00000493916 EVC2Q86UK5 1308 aa32.2■■■□□ 2.74
SNIP1-203ENST00000493916 PPIP5K1Q6PFW1 1433 aa32.19■■■□□ 2.74
SNIP1-203ENST00000493916 CABP2Q9NPB3 220 aa32.19■■■□□ 2.74
SNIP1-203ENST00000493916 FNBP4Q8N3X1 1017 aaPredicted RBP32.18■■■□□ 2.74
SNIP1-203ENST00000493916 LMOD2Q6P5Q4 547 aa32.17■■■□□ 2.74
SNIP1-203ENST00000493916 ACEP12821 1306 aa32.17■■■□□ 2.74
SNIP1-203ENST00000493916 TIMELESSQ9UNS1 1208 aa32.15■■■□□ 2.74
SNIP1-203ENST00000493916 CDK12Q9NYV4 1490 aaPredicted RBP32.12■■■□□ 2.73
SNIP1-203ENST00000493916 RXRBP28702 533 aa32.12■■■□□ 2.73
SNIP1-203ENST00000493916 CABLES1Q8TDN4 633 aa32.12■■■□□ 2.73
SNIP1-203ENST00000493916 USP21Q9UK80 565 aa32.12■■■□□ 2.73
SNIP1-203ENST00000493916 QTRT2Q9H974 415 aaKnown RBP32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms