RNA–Protein interactions for RNA: ENST00000493673.1

PSMB4-205, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 1,650 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-205ENST00000493673 ROBO1Q9Y6N7 1651 aa22.7■■□□□ 1.22
PSMB4-205ENST00000493673 CLSPNQ9HAW4 1339 aa22.69■■□□□ 1.22
PSMB4-205ENST00000493673 ESCO1Q5FWF5 840 aa22.69■■□□□ 1.22
PSMB4-205ENST00000493673 DLC1Q96QB1 1528 aa22.68■■□□□ 1.22
PSMB4-205ENST00000493673 C1orf167Q5SNV9 1468 aa22.68■■□□□ 1.22
PSMB4-205ENST00000493673 NUTM2FA1L443 756 aa22.68■■□□□ 1.22
PSMB4-205ENST00000493673 ORAI2Q96SN7 254 aa22.68■■□□□ 1.22
PSMB4-205ENST00000493673 CCER1Q8TC90 406 aaPredicted RBP22.67■■□□□ 1.22
PSMB4-205ENST00000493673 KNDC1Q76NI1 1749 aa22.66■■□□□ 1.22
PSMB4-205ENST00000493673 MINK1Q8N4C8 1332 aaPredicted RBP22.66■■□□□ 1.22
PSMB4-205ENST00000493673 NALCNQ8IZF0 1738 aa22.65■■□□□ 1.22
PSMB4-205ENST00000493673 LRRC59Q96AG4 307 aaKnown RBP22.64■■□□□ 1.21
PSMB4-205ENST00000493673 HIRIP3Q9BW71 556 aaPredicted RBP22.64■■□□□ 1.21
PSMB4-205ENST00000493673 NBPF8Q3BBV2 869 aa22.62■■□□□ 1.21
PSMB4-205ENST00000493673 TIMELESSQ9UNS1 1208 aa22.62■■□□□ 1.21
PSMB4-205ENST00000493673 ROCK2O75116 1388 aaKnown RBP22.62■■□□□ 1.21
PSMB4-205ENST00000493673 KIAA1210Q9ULL0 1709 aa22.61■■□□□ 1.21
PSMB4-205ENST00000493673 CDC42BPGQ6DT37 1551 aa22.61■■□□□ 1.21
PSMB4-205ENST00000493673 JCADQ9P266 1359 aa22.61■■□□□ 1.21
PSMB4-205ENST00000493673 WASLO00401 505 aaPredicted RBP22.61■■□□□ 1.21
PSMB4-205ENST00000493673 DISP3Q9P2K9 1392 aa22.59■■□□□ 1.21
PSMB4-205ENST00000493673 DDX17Q92841 729 aaKnown RBP22.59■■□□□ 1.21
PSMB4-205ENST00000493673 EIF3AQ14152 1382 aaKnown RBP22.59■■□□□ 1.21
PSMB4-205ENST00000493673 FOXO3O43524 673 aa22.58■■□□□ 1.21
PSMB4-205ENST00000493673 NPHP3Q7Z494 1330 aa22.58■■□□□ 1.21
PSMB4-205ENST00000493673 CENPJQ9HC77 1338 aaPredicted RBP22.58■■□□□ 1.21
PSMB4-205ENST00000493673 CARD11Q9BXL7 1154 aa22.57■■□□□ 1.2
PSMB4-205ENST00000493673 PHF8Q9UPP1 1060 aa22.57■■□□□ 1.2
PSMB4-205ENST00000493673 PHLPP1O60346 1717 aa22.56■■□□□ 1.2
PSMB4-205ENST00000493673 AHDC1Q5TGY3 1603 aaPredicted RBP22.56■■□□□ 1.2
PSMB4-205ENST00000493673 PHF23Q9BUL5 403 aaPredicted RBP22.55■■□□□ 1.2
PSMB4-205ENST00000493673 CDK19Q9BWU1 502 aa22.55■■□□□ 1.2
PSMB4-205ENST00000493673 SOS2Q07890 1332 aaPredicted RBP22.53■■□□□ 1.2
PSMB4-205ENST00000493673 SPATA31A6Q5VVP1 1343 aa22.53■■□□□ 1.2
PSMB4-205ENST00000493673 PSME1Q06323 249 aa22.52■■□□□ 1.2
PSMB4-205ENST00000493673 ANKARQ7Z5J8 1434 aa22.52■■□□□ 1.2
PSMB4-205ENST00000493673 KRT28Q7Z3Y7 464 aa22.51■■□□□ 1.19
PSMB4-205ENST00000493673 NUDT16Q96DE0 195 aaKnown RBP22.51■■□□□ 1.19
PSMB4-205ENST00000493673 PMFBP1Q8TBY8 1022 aa22.5■■□□□ 1.19
PSMB4-205ENST00000493673 GPRASP1Q5JY77 1395 aa22.49■■□□□ 1.19
PSMB4-205ENST00000493673 SRPK2P78362 688 aaKnown RBP22.49■■□□□ 1.19
PSMB4-205ENST00000493673 XPCQ01831 940 aaPredicted RBP22.49■■□□□ 1.19
PSMB4-205ENST00000493673 COL16A1Q07092 1604 aaPredicted RBP22.48■■□□□ 1.19
PSMB4-205ENST00000493673 MEX3CQ5U5Q3 659 aaKnown RBP22.48■■□□□ 1.19
PSMB4-205ENST00000493673 NGDNQ8NEJ9 315 aaKnown RBP22.48■■□□□ 1.19
PSMB4-205ENST00000493673 TRPM1Q7Z4N2 1603 aa22.47■■□□□ 1.19
PSMB4-205ENST00000493673 FMN2Q9NZ56 1722 aa22.47■■□□□ 1.19
PSMB4-205ENST00000493673 NUTM2BA6NNL0 878 aaPredicted RBP22.47■■□□□ 1.19
PSMB4-205ENST00000493673 NUTM2EB1AL46 878 aaPredicted RBP22.47■■□□□ 1.19
PSMB4-205ENST00000493673 NUTM2AQ8IVF1 878 aaPredicted RBP22.47■■□□□ 1.19
PSMB4-205ENST00000493673 CCDC61Q9Y6R9 512 aa22.47■■□□□ 1.19
PSMB4-205ENST00000493673 ADGRB2O60241 1585 aa22.47■■□□□ 1.19
PSMB4-205ENST00000493673 EVC2Q86UK5 1308 aa22.46■■□□□ 1.19
PSMB4-205ENST00000493673 ARHGEF28Q8N1W1 1705 aaKnown RBP22.46■■□□□ 1.19
PSMB4-205ENST00000493673 PRR36Q9H6K5 1346 aa22.45■■□□□ 1.18
PSMB4-205ENST00000493673 NHSL1Q5SYE7 1610 aa22.44■■□□□ 1.18
PSMB4-205ENST00000493673 RALGAPBQ86X10 1494 aa22.44■■□□□ 1.18
PSMB4-205ENST00000493673 TULP4Q9NRJ4 1543 aa22.43■■□□□ 1.18
PSMB4-205ENST00000493673 MED1Q15648 1581 aaPredicted RBP22.43■■□□□ 1.18
PSMB4-205ENST00000493673 SLC24A1O60721 1099 aa22.42■■□□□ 1.18
PSMB4-205ENST00000493673 CABP2Q9NPB3 220 aa22.42■■□□□ 1.18
PSMB4-205ENST00000493673 PNPLA6Q8IY17 1366 aa22.42■■□□□ 1.18
PSMB4-205ENST00000493673 LMOD2Q6P5Q4 547 aa22.41■■□□□ 1.18
PSMB4-205ENST00000493673 SPATA31A3Q5VYP0 1347 aa22.4■■□□□ 1.18
PSMB4-205ENST00000493673 PLEKHG3A1L390 1219 aa22.39■■□□□ 1.17
PSMB4-205ENST00000493673 PXDNQ92626 1479 aa22.38■■□□□ 1.17
PSMB4-205ENST00000493673 KIF1AQ12756 1690 aa22.38■■□□□ 1.17
PSMB4-205ENST00000493673 SBNO1A3KN83 1393 aa22.37■■□□□ 1.17
PSMB4-205ENST00000493673 PAK3O75914 559 aaPredicted RBP22.36■■□□□ 1.17
PSMB4-205ENST00000493673 ACEP12821 1306 aa22.36■■□□□ 1.17
PSMB4-205ENST00000493673 SHPRHQ149N8 1683 aa22.35■■□□□ 1.17
PSMB4-205ENST00000493673 ST20-MTHFSA0A0A6YYL1 179 aa22.35■■□□□ 1.17
PSMB4-205ENST00000493673 ADAMTS2O95450 1211 aa22.35■■□□□ 1.17
PSMB4-205ENST00000493673 HAP1P54257 671 aaPredicted RBP22.35■■□□□ 1.17
PSMB4-205ENST00000493673 CABP1Q9NZU7 370 aa22.35■■□□□ 1.17
PSMB4-205ENST00000493673 ATP7BP35670 1465 aa22.34■■□□□ 1.17
PSMB4-205ENST00000493673 SBNO2Q9Y2G9 1366 aa22.33■■□□□ 1.17
PSMB4-205ENST00000493673 USP32Q8NFA0 1604 aa22.33■■□□□ 1.17
PSMB4-205ENST00000493673 ZNF772Q68DY9 489 aaPredicted RBP22.33■■□□□ 1.16
PSMB4-205ENST00000493673 NGLY1Q96IV0 654 aa22.33■■□□□ 1.16
PSMB4-205ENST00000493673 ARHGEF10O15013 1369 aa22.33■■□□□ 1.16
PSMB4-205ENST00000493673 RGPD8O14715 1765 aaPredicted RBP22.32■■□□□ 1.16
PSMB4-205ENST00000493673 C8orf37Q96NL8 207 aa22.32■■□□□ 1.16
PSMB4-205ENST00000493673 RGS17Q9UGC6 210 aaPredicted RBP22.31■■□□□ 1.16
PSMB4-205ENST00000493673 QRICH2Q9H0J4 1663 aa22.31■■□□□ 1.16
PSMB4-205ENST00000493673 TNS3Q68CZ2 1445 aa22.31■■□□□ 1.16
PSMB4-205ENST00000493673 PPIP5K1Q6PFW1 1433 aa22.31■■□□□ 1.16
PSMB4-205ENST00000493673 POLR3AO14802 1390 aaPredicted RBP22.3■■□□□ 1.16
PSMB4-205ENST00000493673 ATAD2Q6PL18 1390 aa22.3■■□□□ 1.16
PSMB4-205ENST00000493673 PLEKHG5O94827 1062 aa22.3■■□□□ 1.16
PSMB4-205ENST00000493673 PUS7Q96PZ0 661 aaKnown RBP22.3■■□□□ 1.16
PSMB4-205ENST00000493673 ZNF692Q9BU19 519 aaPredicted RBP22.3■■□□□ 1.16
PSMB4-205ENST00000493673 LRP6O75581 1613 aa22.29■■□□□ 1.16
PSMB4-205ENST00000493673 ILDR2Q71H61 639 aa22.28■■□□□ 1.16
PSMB4-205ENST00000493673 USP47Q96K76 1375 aa22.28■■□□□ 1.16
PSMB4-205ENST00000493673 TMF1P82094 1093 aa22.26■■□□□ 1.15
PSMB4-205ENST00000493673 TMC1Q8TDI8 760 aa22.26■■□□□ 1.15
PSMB4-205ENST00000493673 CABLES1Q8TDN4 633 aa22.26■■□□□ 1.15
PSMB4-205ENST00000493673 TESK2Q96S53 571 aa22.26■■□□□ 1.15
PSMB4-205ENST00000493673 AFF2P51816 1311 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms