RNA–Protein interactions for RNA: ENST00000493542.1

TCN2-207, Transcript of transcobalamin 2, humanhuman

TSL 3

Gene TCN2, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-207ENST00000493542 DEFB132Q7Z7B7 95 aa14.08□□□□□ -0.16
TCN2-207ENST00000493542 GJD4Q96KN9 370 aaPredicted RBP14.08□□□□□ -0.16
TCN2-207ENST00000493542 BCL9LQ86UU0 1499 aa14.07□□□□□ -0.16
TCN2-207ENST00000493542 PPLO60437 1756 aa14.06□□□□□ -0.16
TCN2-207ENST00000493542 PRAG1Q86YV5 1406 aa14.06□□□□□ -0.16
TCN2-207ENST00000493542 BLMP54132 1417 aaPredicted RBP14.05□□□□□ -0.16
TCN2-207ENST00000493542 MYOM2P54296 1465 aa14.04□□□□□ -0.16
TCN2-207ENST00000493542 ROBO2Q9HCK4 1378 aa14.03□□□□□ -0.16
TCN2-207ENST00000493542 COL22A1Q8NFW1 1626 aaPredicted RBP14.02□□□□□ -0.16
TCN2-207ENST00000493542 SF3B2Q13435 895 aaKnown RBP14.02□□□□□ -0.17
TCN2-207ENST00000493542 HFM1A2PYH4 1435 aa14.01□□□□□ -0.17
TCN2-207ENST00000493542 XPCQ01831 940 aaPredicted RBP14.01□□□□□ -0.17
TCN2-207ENST00000493542 PSDA5PKW4 1024 aaPredicted RBP14□□□□□ -0.17
TCN2-207ENST00000493542 ESCO1Q5FWF5 840 aa14□□□□□ -0.17
TCN2-207ENST00000493542 UNC5CLQ8IV45 518 aa14□□□□□ -0.17
TCN2-207ENST00000493542 RALGAPBQ86X10 1494 aa13.99□□□□□ -0.17
TCN2-207ENST00000493542 IFT172Q9UG01 1749 aa13.99□□□□□ -0.17
TCN2-207ENST00000493542 NPHP3Q7Z494 1330 aa13.99□□□□□ -0.17
TCN2-207ENST00000493542 LRP5O75197 1615 aa13.98□□□□□ -0.17
TCN2-207ENST00000493542 GLI3P10071 1580 aa13.98□□□□□ -0.17
TCN2-207ENST00000493542 VGFO15240 615 aaPredicted RBP13.98□□□□□ -0.17
TCN2-207ENST00000493542 FOXO3O43524 673 aa13.98□□□□□ -0.17
TCN2-207ENST00000493542 SEPT12Q8IYM1 358 aa13.98□□□□□ -0.17
TCN2-207ENST00000493542 MARF1Q9Y4F3 1742 aaKnown RBP13.97□□□□□ -0.17
TCN2-207ENST00000493542 PXDNQ92626 1479 aa13.97□□□□□ -0.17
TCN2-207ENST00000493542 CDC42BPGQ6DT37 1551 aa13.96□□□□□ -0.17
TCN2-207ENST00000493542 RPGRIP1LQ68CZ1 1315 aa13.96□□□□□ -0.17
TCN2-207ENST00000493542 HRCP23327 699 aa13.96□□□□□ -0.17
TCN2-207ENST00000493542 TRIM26Q12899 539 aaPredicted RBP13.96□□□□□ -0.17
TCN2-207ENST00000493542 KNDC1Q76NI1 1749 aa13.95□□□□□ -0.18
TCN2-207ENST00000493542 SLIT2O94813 1529 aa13.95□□□□□ -0.18
TCN2-207ENST00000493542 NUTM2FA1L443 756 aa13.94□□□□□ -0.18
TCN2-207ENST00000493542 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.93□□□□□ -0.18
TCN2-207ENST00000493542 BRWD3Q6RI45 1802 aa13.93□□□□□ -0.18
TCN2-207ENST00000493542 SLC4A1APQ9BWU0 796 aaKnown RBP13.93□□□□□ -0.18
TCN2-207ENST00000493542 TECPR2O15040 1411 aa13.92□□□□□ -0.18
TCN2-207ENST00000493542 SPATA31E1Q6ZUB1 1445 aa13.92□□□□□ -0.18
TCN2-207ENST00000493542 BAG6P46379 1132 aa13.92□□□□□ -0.18
TCN2-207ENST00000493542 KRT27Q7Z3Y8 459 aa13.92□□□□□ -0.18
TCN2-207ENST00000493542 CCDC9Q9Y3X0 531 aaKnown RBP13.92□□□□□ -0.18
TCN2-207ENST00000493542 ADGRF5Q8IZF2 1346 aa13.91□□□□□ -0.18
TCN2-207ENST00000493542 VPS72Q15906 364 aa13.91□□□□□ -0.18
TCN2-207ENST00000493542 LRPPRCP42704 1394 aaKnown RBP13.91□□□□□ -0.18
TCN2-207ENST00000493542 SPATA31A3Q5VYP0 1347 aa13.9□□□□□ -0.18
TCN2-207ENST00000493542 FMN2Q9NZ56 1722 aa13.9□□□□□ -0.18
TCN2-207ENST00000493542 ONECUT3O60422 494 aaPredicted RBP13.9□□□□□ -0.18
TCN2-207ENST00000493542 PLEKHG5O94827 1062 aa13.9□□□□□ -0.18
TCN2-207ENST00000493542 HAP1P54257 671 aaPredicted RBP13.89□□□□□ -0.19
TCN2-207ENST00000493542 RGPD8O14715 1765 aaPredicted RBP13.88□□□□□ -0.19
TCN2-207ENST00000493542 A0A0G2JS52 829 aa13.88□□□□□ -0.19
TCN2-207ENST00000493542 MYT1Q01538 1121 aa13.88□□□□□ -0.19
TCN2-207ENST00000493542 EN1Q05925 392 aaPredicted RBP13.88□□□□□ -0.19
TCN2-207ENST00000493542 R3HDM1Q15032 1099 aaKnown RBP13.88□□□□□ -0.19
TCN2-207ENST00000493542 CABLES1Q8TDN4 633 aa13.88□□□□□ -0.19
TCN2-207ENST00000493542 PIK3C2GO75747 1445 aa13.88□□□□□ -0.19
TCN2-207ENST00000493542 PLEKHH1Q9ULM0 1364 aa13.87□□□□□ -0.19
TCN2-207ENST00000493542 KRT28Q7Z3Y7 464 aa13.87□□□□□ -0.19
TCN2-207ENST00000493542 WAPLQ7Z5K2 1190 aa13.87□□□□□ -0.19
TCN2-207ENST00000493542 CCDC144AA2RUR9 1427 aa13.87□□□□□ -0.19
TCN2-207ENST00000493542 USP32Q8NFA0 1604 aa13.86□□□□□ -0.19
TCN2-207ENST00000493542 ABCC11Q96J66 1382 aa13.86□□□□□ -0.19
TCN2-207ENST00000493542 KIF1AQ12756 1690 aa13.86□□□□□ -0.19
TCN2-207ENST00000493542 STK26Q9P289 416 aa13.86□□□□□ -0.19
TCN2-207ENST00000493542 ANKRD30BQ9BXX2 1392 aa13.85□□□□□ -0.19
TCN2-207ENST00000493542 YY1P25490 414 aa13.84□□□□□ -0.19
TCN2-207ENST00000493542 FAM98CQ17RN3 349 aaKnown RBP13.84□□□□□ -0.19
TCN2-207ENST00000493542 RGL3Q3MIN7 710 aa13.84□□□□□ -0.19
TCN2-207ENST00000493542 FAM182BQ5T319 152 aa13.84□□□□□ -0.19
TCN2-207ENST00000493542 YTHDC2Q9H6S0 1430 aaKnown RBP13.83□□□□□ -0.2
TCN2-207ENST00000493542 NRXN1Q9ULB1 1477 aa13.83□□□□□ -0.2
TCN2-207ENST00000493542 TMEM132EQ6IEE7 984 aa13.83□□□□□ -0.2
TCN2-207ENST00000493542 MPHOSPH9Q99550 1183 aa13.83□□□□□ -0.2
TCN2-207ENST00000493542 ABCA3Q99758 1704 aa13.82□□□□□ -0.2
TCN2-207ENST00000493542 FAM83GA6ND36 823 aa13.82□□□□□ -0.2
TCN2-207ENST00000493542 LMOD2Q6P5Q4 547 aa13.82□□□□□ -0.2
TCN2-207ENST00000493542 PLCH1Q4KWH8 1693 aa13.81□□□□□ -0.2
TCN2-207ENST00000493542 TNS3Q68CZ2 1445 aa13.81□□□□□ -0.2
TCN2-207ENST00000493542 PSME1Q06323 249 aa13.8□□□□□ -0.2
TCN2-207ENST00000493542 EZH2Q15910 746 aaKnown RBP13.8□□□□□ -0.2
TCN2-207ENST00000493542 NWD2Q9ULI1 1742 aa13.8□□□□□ -0.2
TCN2-207ENST00000493542 SIRT1Q96EB6 747 aa13.79□□□□□ -0.2
TCN2-207ENST00000493542 PCGF6Q9BYE7 350 aa13.79□□□□□ -0.2
TCN2-207ENST00000493542 PHF8Q9UPP1 1060 aa13.79□□□□□ -0.2
TCN2-207ENST00000493542 C14orf93Q9H972 538 aaKnown RBP13.78□□□□□ -0.2
TCN2-207ENST00000493542 BTG4Q9NY30 223 aa13.78□□□□□ -0.2
TCN2-207ENST00000493542 RAB3GAP2Q9H2M9 1393 aa13.77□□□□□ -0.21
TCN2-207ENST00000493542 RGPD1P0DJD0 1748 aa13.76□□□□□ -0.21
TCN2-207ENST00000493542 SBNO1A3KN83 1393 aa13.76□□□□□ -0.21
TCN2-207ENST00000493542 TRPM3Q9HCF6 1732 aaPredicted RBP13.76□□□□□ -0.21
TCN2-207ENST00000493542 ADGRB2O60241 1585 aa13.75□□□□□ -0.21
TCN2-207ENST00000493542 DLC1Q96QB1 1528 aa13.75□□□□□ -0.21
TCN2-207ENST00000493542 DISP2A7MBM2 1401 aa13.75□□□□□ -0.21
TCN2-207ENST00000493542 ARHGEF10O15013 1369 aa13.75□□□□□ -0.21
TCN2-207ENST00000493542 CFAP70Q5T0N1 1121 aa13.75□□□□□ -0.21
TCN2-207ENST00000493542 CAMKK2Q96RR4 588 aa13.75□□□□□ -0.21
TCN2-207ENST00000493542 ADGRB1O14514 1584 aa13.75□□□□□ -0.21
TCN2-207ENST00000493542 NRAPQ86VF7 1730 aa13.74□□□□□ -0.21
TCN2-207ENST00000493542 ALS2Q96Q42 1657 aa13.73□□□□□ -0.21
TCN2-207ENST00000493542 SPATA31A5Q5VU36 1347 aa13.73□□□□□ -0.21
TCN2-207ENST00000493542 SPATA31A7Q8IWB4 1347 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms