RNA–Protein interactions for RNA: ENST00000493498.1

TRIM50-204, Transcript of tripartite motif containing 50, humanhuman

TSL 4

Gene TRIM50, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-204ENST00000493498 NPHP3Q7Z494 1330 aa20.1■□□□□ 0.81
TRIM50-204ENST00000493498 ORAI2Q96SN7 254 aa20.1■□□□□ 0.81
TRIM50-204ENST00000493498 COL22A1Q8NFW1 1626 aaPredicted RBP20.09■□□□□ 0.81
TRIM50-204ENST00000493498 TECPR2O15040 1411 aa20.08■□□□□ 0.8
TRIM50-204ENST00000493498 LRPPRCP42704 1394 aaKnown RBP20.08■□□□□ 0.8
TRIM50-204ENST00000493498 IFT172Q9UG01 1749 aa20.07■□□□□ 0.8
TRIM50-204ENST00000493498 ADAMTS2O95450 1211 aa20.07■□□□□ 0.8
TRIM50-204ENST00000493498 KNDC1Q76NI1 1749 aa20.07■□□□□ 0.8
TRIM50-204ENST00000493498 RGS12O14924 1447 aa20.06■□□□□ 0.8
TRIM50-204ENST00000493498 SPATA31E1Q6ZUB1 1445 aa20.06■□□□□ 0.8
TRIM50-204ENST00000493498 ESCO1Q5FWF5 840 aa20.05■□□□□ 0.8
TRIM50-204ENST00000493498 ADGRF5Q8IZF2 1346 aa20.04■□□□□ 0.8
TRIM50-204ENST00000493498 MPHOSPH9Q99550 1183 aa20.04■□□□□ 0.8
TRIM50-204ENST00000493498 USP21Q9UK80 565 aa20.04■□□□□ 0.8
TRIM50-204ENST00000493498 TRPC5Q9UL62 973 aaPredicted RBP20.04■□□□□ 0.8
TRIM50-204ENST00000493498 ABCC11Q96J66 1382 aa20.04■□□□□ 0.8
TRIM50-204ENST00000493498 FOXD1Q16676 465 aa20.03■□□□□ 0.8
TRIM50-204ENST00000493498 RGL3Q3MIN7 710 aa20.03■□□□□ 0.8
TRIM50-204ENST00000493498 FNBP4Q8N3X1 1017 aaPredicted RBP20.02■□□□□ 0.8
TRIM50-204ENST00000493498 PIK3C2GO75747 1445 aa20.02■□□□□ 0.79
TRIM50-204ENST00000493498 MYOM2P54296 1465 aa20.01■□□□□ 0.79
TRIM50-204ENST00000493498 MARF1Q9Y4F3 1742 aaKnown RBP20.01■□□□□ 0.79
TRIM50-204ENST00000493498 PXDNQ92626 1479 aa20■□□□□ 0.79
TRIM50-204ENST00000493498 ATAD2Q6PL18 1390 aa20■□□□□ 0.79
TRIM50-204ENST00000493498 STK26Q9P289 416 aa20■□□□□ 0.79
TRIM50-204ENST00000493498 KIF1AQ12756 1690 aa20■□□□□ 0.79
TRIM50-204ENST00000493498 SIRT1Q96EB6 747 aa19.99■□□□□ 0.79
TRIM50-204ENST00000493498 ATRNO75882 1429 aa19.98■□□□□ 0.79
TRIM50-204ENST00000493498 FMN2Q9NZ56 1722 aa19.98■□□□□ 0.79
TRIM50-204ENST00000493498 YTHDC2Q9H6S0 1430 aaKnown RBP19.97■□□□□ 0.79
TRIM50-204ENST00000493498 FOXO3O43524 673 aa19.97■□□□□ 0.79
TRIM50-204ENST00000493498 WAPLQ7Z5K2 1190 aa19.97■□□□□ 0.79
TRIM50-204ENST00000493498 TMEM132EQ6IEE7 984 aa19.94■□□□□ 0.78
TRIM50-204ENST00000493498 C14orf93Q9H972 538 aaKnown RBP19.93■□□□□ 0.78
TRIM50-204ENST00000493498 DHX57Q6P158 1386 aaKnown RBP19.93■□□□□ 0.78
TRIM50-204ENST00000493498 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.93■□□□□ 0.78
TRIM50-204ENST00000493498 NRXN1Q9ULB1 1477 aa19.92■□□□□ 0.78
TRIM50-204ENST00000493498 NUTM2FA1L443 756 aa19.91■□□□□ 0.78
TRIM50-204ENST00000493498 XPCQ01831 940 aaPredicted RBP19.91■□□□□ 0.78
TRIM50-204ENST00000493498 PLEKHH1Q9ULM0 1364 aa19.91■□□□□ 0.78
TRIM50-204ENST00000493498 BCL9LQ86UU0 1499 aa19.91■□□□□ 0.78
TRIM50-204ENST00000493498 SPATA31A3Q5VYP0 1347 aa19.9■□□□□ 0.78
TRIM50-204ENST00000493498 PSME1Q06323 249 aa19.89■□□□□ 0.77
TRIM50-204ENST00000493498 CCDC125Q86Z20 511 aa19.89■□□□□ 0.77
TRIM50-204ENST00000493498 HRCP23327 699 aa19.88■□□□□ 0.77
TRIM50-204ENST00000493498 GJD4Q96KN9 370 aaPredicted RBP19.88■□□□□ 0.77
TRIM50-204ENST00000493498 KRT28Q7Z3Y7 464 aa19.87■□□□□ 0.77
TRIM50-204ENST00000493498 DLC1Q96QB1 1528 aa19.86■□□□□ 0.77
TRIM50-204ENST00000493498 RGPD8O14715 1765 aaPredicted RBP19.86■□□□□ 0.77
TRIM50-204ENST00000493498 UNC5CLQ8IV45 518 aa19.86■□□□□ 0.77
TRIM50-204ENST00000493498 PHF8Q9UPP1 1060 aa19.86■□□□□ 0.77
TRIM50-204ENST00000493498 USP32Q8NFA0 1604 aa19.86■□□□□ 0.77
TRIM50-204ENST00000493498 TNS3Q68CZ2 1445 aa19.85■□□□□ 0.77
TRIM50-204ENST00000493498 HAP1P54257 671 aaPredicted RBP19.85■□□□□ 0.77
TRIM50-204ENST00000493498 SLIT2O94813 1529 aa19.85■□□□□ 0.77
TRIM50-204ENST00000493498 SBNO1A3KN83 1393 aa19.84■□□□□ 0.77
TRIM50-204ENST00000493498 CFAP70Q5T0N1 1121 aa19.84■□□□□ 0.77
TRIM50-204ENST00000493498 ANKARQ7Z5J8 1434 aa19.84■□□□□ 0.77
TRIM50-204ENST00000493498 ARHGEF10O15013 1369 aa19.83■□□□□ 0.77
TRIM50-204ENST00000493498 POGKQ9P215 609 aa19.83■□□□□ 0.77
TRIM50-204ENST00000493498 EIF3AQ14152 1382 aaKnown RBP19.83■□□□□ 0.76
TRIM50-204ENST00000493498 STAC3Q96MF2 364 aa19.82■□□□□ 0.76
TRIM50-204ENST00000493498 PRAM1Q96QH2 718 aa19.82■□□□□ 0.76
TRIM50-204ENST00000493498 ADGRB2O60241 1585 aa19.82■□□□□ 0.76
TRIM50-204ENST00000493498 NWD2Q9ULI1 1742 aa19.82■□□□□ 0.76
TRIM50-204ENST00000493498 RALGAPBQ86X10 1494 aa19.8■□□□□ 0.76
TRIM50-204ENST00000493498 ZRANB1Q9UGI0 708 aa19.8■□□□□ 0.76
TRIM50-204ENST00000493498 RAB3GAP2Q9H2M9 1393 aa19.8■□□□□ 0.76
TRIM50-204ENST00000493498 GLI3P10071 1580 aa19.78■□□□□ 0.76
TRIM50-204ENST00000493498 ABCA3Q99758 1704 aa19.77■□□□□ 0.76
TRIM50-204ENST00000493498 SAFB2Q14151 953 aaKnown RBP eCLIP19.77■□□□□ 0.76
TRIM50-204ENST00000493498 EP400Q96L91 3159 aa19.77■□□□□ 0.76
TRIM50-204ENST00000493498 ADGRB1O14514 1584 aa19.77■□□□□ 0.76
TRIM50-204ENST00000493498 PLCH1Q4KWH8 1693 aa19.77■□□□□ 0.76
TRIM50-204ENST00000493498 VPS72Q15906 364 aa19.76■□□□□ 0.75
TRIM50-204ENST00000493498 LMOD2Q6P5Q4 547 aa19.75■□□□□ 0.75
TRIM50-204ENST00000493498 BLMP54132 1417 aaPredicted RBP19.75■□□□□ 0.75
TRIM50-204ENST00000493498 GPRASP1Q5JY77 1395 aa19.74■□□□□ 0.75
TRIM50-204ENST00000493498 BRWD3Q6RI45 1802 aa19.73■□□□□ 0.75
TRIM50-204ENST00000493498 TULP4Q9NRJ4 1543 aa19.72■□□□□ 0.75
TRIM50-204ENST00000493498 SF3B2Q13435 895 aaKnown RBP19.72■□□□□ 0.75
TRIM50-204ENST00000493498 TRAK1Q9UPV9 953 aa19.72■□□□□ 0.75
TRIM50-204ENST00000493498 TRPM3Q9HCF6 1732 aaPredicted RBP19.71■□□□□ 0.75
TRIM50-204ENST00000493498 PMFBP1Q8TBY8 1022 aa19.71■□□□□ 0.75
TRIM50-204ENST00000493498 CABLES1Q8TDN4 633 aa19.71■□□□□ 0.75
TRIM50-204ENST00000493498 CCDC9Q9Y3X0 531 aaKnown RBP19.71■□□□□ 0.75
TRIM50-204ENST00000493498 ONECUT3O60422 494 aaPredicted RBP19.7■□□□□ 0.74
TRIM50-204ENST00000493498 SEPT12Q8IYM1 358 aa19.7■□□□□ 0.74
TRIM50-204ENST00000493498 DCAF11Q8TEB1 546 aa19.7■□□□□ 0.74
TRIM50-204ENST00000493498 ALS2Q96Q42 1657 aa19.69■□□□□ 0.74
TRIM50-204ENST00000493498 ITSN1Q15811 1721 aa19.69■□□□□ 0.74
TRIM50-204ENST00000493498 COL14A1Q05707 1796 aaKnown RBP19.68■□□□□ 0.74
TRIM50-204ENST00000493498 WASLO00401 505 aaPredicted RBP19.68■□□□□ 0.74
TRIM50-204ENST00000493498 KDM2AQ9Y2K7 1162 aa19.68■□□□□ 0.74
TRIM50-204ENST00000493498 MINK1Q8N4C8 1332 aaPredicted RBP19.68■□□□□ 0.74
TRIM50-204ENST00000493498 HIRIP3Q9BW71 556 aaPredicted RBP19.67■□□□□ 0.74
TRIM50-204ENST00000493498 NRAPQ86VF7 1730 aa19.66■□□□□ 0.74
TRIM50-204ENST00000493498 FAM83GA6ND36 823 aa19.66■□□□□ 0.74
TRIM50-204ENST00000493498 PLEKHG5O94827 1062 aa19.66■□□□□ 0.74
TRIM50-204ENST00000493498 KRT27Q7Z3Y8 459 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 763.8 ms