RNA–Protein interactions for RNA: ENST00000493409.5

CCSER2-206, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 5

Gene CCSER2, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-206ENST00000493409 GNPATO15228 680 aa12.26□□□□□ -0.45
CCSER2-206ENST00000493409 RBM26Q5T8P6 1007 aaKnown RBP12.26□□□□□ -0.45
CCSER2-206ENST00000493409 RNF19BQ6ZMZ0 732 aa12.25□□□□□ -0.45
CCSER2-206ENST00000493409 ATP13A2Q9NQ11 1180 aa12.25□□□□□ -0.45
CCSER2-206ENST00000493409 ZBTB24O43167 697 aaPredicted RBP12.24□□□□□ -0.45
CCSER2-206ENST00000493409 SNIP1Q8TAD8 396 aaKnown RBP12.24□□□□□ -0.45
CCSER2-206ENST00000493409 PHOX2BQ99453 314 aa12.24□□□□□ -0.45
CCSER2-206ENST00000493409 SNRPBP14678 240 aaKnown RBP12.23□□□□□ -0.45
CCSER2-206ENST00000493409 INSM1Q01101 510 aaPredicted RBP12.22□□□□□ -0.45
CCSER2-206ENST00000493409 TRIM32Q13049 653 aa12.22□□□□□ -0.45
CCSER2-206ENST00000493409 SULF1Q8IWU6 871 aa12.22□□□□□ -0.45
CCSER2-206ENST00000493409 TESPA1A2RU30 521 aaPredicted RBP12.21□□□□□ -0.45
CCSER2-206ENST00000493409 TRIM47Q96LD4 638 aa12.21□□□□□ -0.45
CCSER2-206ENST00000493409 J3QL48 77 aa12.2□□□□□ -0.46
CCSER2-206ENST00000493409 MRGPRX2Q96LB1 330 aa12.2□□□□□ -0.46
CCSER2-206ENST00000493409 MMP16P51512 607 aa12.19□□□□□ -0.46
CCSER2-206ENST00000493409 TERTO14746 1132 aaKnown RBP12.18□□□□□ -0.46
CCSER2-206ENST00000493409 SENP2Q9HC62 589 aa12.16□□□□□ -0.46
CCSER2-206ENST00000493409 HPS1Q92902 700 aa12.15□□□□□ -0.46
CCSER2-206ENST00000493409 GRIPAP1Q4V328 841 aa12.14□□□□□ -0.47
CCSER2-206ENST00000493409 DXOO77932 396 aaKnown RBP12.13□□□□□ -0.47
CCSER2-206ENST00000493409 Q3C1V9 767 aa12.13□□□□□ -0.47
CCSER2-206ENST00000493409 SMYD5Q6GMV2 418 aa12.11□□□□□ -0.47
CCSER2-206ENST00000493409 REPIN1Q9BWE0 567 aaKnown RBP12.11□□□□□ -0.47
CCSER2-206ENST00000493409 KIFC2Q96AC6 838 aa12.1□□□□□ -0.47
CCSER2-206ENST00000493409 USB1Q9BQ65 265 aaKnown RBP12.09□□□□□ -0.47
CCSER2-206ENST00000493409 CD46P15529 392 aa12.08□□□□□ -0.48
CCSER2-206ENST00000493409 SKOR1P84550 965 aa12.08□□□□□ -0.48
CCSER2-206ENST00000493409 RC3H1Q5TC82 1133 aaKnown RBP12.07□□□□□ -0.48
CCSER2-206ENST00000493409 WNT7BP56706 349 aa12.05□□□□□ -0.48
CCSER2-206ENST00000493409 KDM4AO75164 1064 aa12.03□□□□□ -0.48
CCSER2-206ENST00000493409 HLA-CQ95604 372 aa12.02□□□□□ -0.49
CCSER2-206ENST00000493409 LORP23490 312 aaPredicted RBP12.01□□□□□ -0.49
CCSER2-206ENST00000493409 CCDC24Q8N4L8 307 aa12.01□□□□□ -0.49
CCSER2-206ENST00000493409 NXF1Q9UBU9 619 aaKnown RBP11.99□□□□□ -0.49
CCSER2-206ENST00000493409 ALDH1A1P00352 501 aa11.98□□□□□ -0.49
CCSER2-206ENST00000493409 GPIHBP1Q8IV16 184 aa11.98□□□□□ -0.49
CCSER2-206ENST00000493409 SIAH2O43255 324 aa11.97□□□□□ -0.49
CCSER2-206ENST00000493409 SLC16A10Q8TF71 515 aa11.97□□□□□ -0.49
CCSER2-206ENST00000493409 HOXA2O43364 376 aa11.96□□□□□ -0.49
CCSER2-206ENST00000493409 GMPRP36959 345 aa11.96□□□□□ -0.49
CCSER2-206ENST00000493409 USP46P62068 366 aa11.96□□□□□ -0.49
CCSER2-206ENST00000493409 TRIM46Q7Z4K8 759 aa11.96□□□□□ -0.49
CCSER2-206ENST00000493409 NPAS3Q8IXF0 933 aa11.95□□□□□ -0.5
CCSER2-206ENST00000493409 BMP1P13497 986 aa11.94□□□□□ -0.5
CCSER2-206ENST00000493409 JUNDP17535 347 aa11.94□□□□□ -0.5
CCSER2-206ENST00000493409 FAM181BA6NEQ2 426 aa11.92□□□□□ -0.5
CCSER2-206ENST00000493409 GUCA2AQ02747 115 aa11.92□□□□□ -0.5
CCSER2-206ENST00000493409 MAP2K5Q13163 448 aa11.92□□□□□ -0.5
CCSER2-206ENST00000493409 PTCRAQ6ISU1 281 aaPredicted RBP11.92□□□□□ -0.5
CCSER2-206ENST00000493409 ZSCAN1Q8NBB4 408 aa11.91□□□□□ -0.5
CCSER2-206ENST00000493409 IRF7Q92985 503 aa11.91□□□□□ -0.5
CCSER2-206ENST00000493409 H3BM21 787 aa11.9□□□□□ -0.5
CCSER2-206ENST00000493409 CAPN5O15484 640 aaPredicted RBP11.9□□□□□ -0.5
CCSER2-206ENST00000493409 SYMPKQ92797 1274 aaKnown RBP11.9□□□□□ -0.5
CCSER2-206ENST00000493409 MDM2Q00987 491 aaPredicted RBP11.89□□□□□ -0.51
CCSER2-206ENST00000493409 EHBP1Q8NDI1 1231 aa11.89□□□□□ -0.51
CCSER2-206ENST00000493409 VEGFBP49765 207 aa11.88□□□□□ -0.51
CCSER2-206ENST00000493409 NUDT12Q9BQG2 462 aa11.88□□□□□ -0.51
CCSER2-206ENST00000493409 IRF6O14896 467 aa11.87□□□□□ -0.51
CCSER2-206ENST00000493409 ERBB4Q15303 1308 aa11.86□□□□□ -0.51
CCSER2-206ENST00000493409 LOC100996750A0A140TA64 210 aa11.86□□□□□ -0.51
CCSER2-206ENST00000493409 KRTAP4-6Q9BYQ5 205 aa11.86□□□□□ -0.51
CCSER2-206ENST00000493409 WASF2Q9Y6W5 498 aa11.86□□□□□ -0.51
CCSER2-206ENST00000493409 SH3BP2P78314 561 aa11.85□□□□□ -0.51
CCSER2-206ENST00000493409 RETREG3Q86VR2 466 aa11.85□□□□□ -0.51
CCSER2-206ENST00000493409 ZFP42Q96MM3 310 aa11.82□□□□□ -0.52
CCSER2-206ENST00000493409 FAM217BQ9NTX9 383 aaPredicted RBP11.81□□□□□ -0.52
CCSER2-206ENST00000493409 CCNYL3P0C7X3 344 aa11.79□□□□□ -0.52
CCSER2-206ENST00000493409 PCDHGC3Q9UN70 934 aa11.79□□□□□ -0.52
CCSER2-206ENST00000493409 MINK1Q8N4C8 1332 aaPredicted RBP11.79□□□□□ -0.52
CCSER2-206ENST00000493409 TLL2Q9Y6L7 1015 aa11.78□□□□□ -0.52
CCSER2-206ENST00000493409 MS4A1P11836 297 aa11.77□□□□□ -0.53
CCSER2-206ENST00000493409 GPCPD1Q9NPB8 672 aa11.77□□□□□ -0.53
CCSER2-206ENST00000493409 UNC93B1Q9H1C4 597 aa11.76□□□□□ -0.53
CCSER2-206ENST00000493409 MPNDQ8N594 471 aa11.75□□□□□ -0.53
CCSER2-206ENST00000493409 CCDC102AQ96A19 550 aa11.75□□□□□ -0.53
CCSER2-206ENST00000493409 EVA1BQ9NVM1 165 aa11.75□□□□□ -0.53
CCSER2-206ENST00000493409 VSIG8P0DPA2 414 aa11.74□□□□□ -0.53
CCSER2-206ENST00000493409 FDX1P10109 184 aa11.74□□□□□ -0.53
CCSER2-206ENST00000493409 CLCN1P35523 988 aa11.74□□□□□ -0.53
CCSER2-206ENST00000493409 PTPRNQ16849 979 aa11.74□□□□□ -0.53
CCSER2-206ENST00000493409 NUTM1Q86Y26 1132 aa11.74□□□□□ -0.53
CCSER2-206ENST00000493409 NNTQ13423 1086 aa11.73□□□□□ -0.53
CCSER2-206ENST00000493409 MRPL14Q6P1L8 145 aaKnown RBP11.73□□□□□ -0.53
CCSER2-206ENST00000493409 BAP1Q92560 729 aa11.73□□□□□ -0.53
CCSER2-206ENST00000493409 C6orf229H3BNL8 230 aa11.72□□□□□ -0.53
CCSER2-206ENST00000493409 LINC01559Q495D7 138 aa11.72□□□□□ -0.53
CCSER2-206ENST00000493409 TIMP2P16035 220 aa11.71□□□□□ -0.53
CCSER2-206ENST00000493409 ZNF511Q8NB15 262 aa11.71□□□□□ -0.53
CCSER2-206ENST00000493409 KLF16Q9BXK1 252 aaPredicted RBP11.71□□□□□ -0.53
CCSER2-206ENST00000493409 VARSP26640 1264 aaKnown RBP11.7□□□□□ -0.54
CCSER2-206ENST00000493409 PLEKHG3A1L390 1219 aa11.69□□□□□ -0.54
CCSER2-206ENST00000493409 KCNH2Q12809 1159 aa11.69□□□□□ -0.54
CCSER2-206ENST00000493409 PURBQ96QR8 312 aaKnown RBP11.69□□□□□ -0.54
CCSER2-206ENST00000493409 SOBPA7XYQ1 873 aa11.68□□□□□ -0.54
CCSER2-206ENST00000493409 PLCB2Q00722 1185 aa11.68□□□□□ -0.54
CCSER2-206ENST00000493409 ADH1CP00326 375 aa11.67□□□□□ -0.54
CCSER2-206ENST00000493409 SCARF1Q14162 830 aa11.67□□□□□ -0.54
CCSER2-206ENST00000493409 WDR4P57081 412 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms