RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 TRPM1Q7Z4N2 1603 aa11.54□□□□□ -0.56
TM4SF1-204ENST00000493348 SAFB2Q14151 953 aaKnown RBP eCLIP11.54□□□□□ -0.56
TM4SF1-204ENST00000493348 WAPLQ7Z5K2 1190 aa11.54□□□□□ -0.56
TM4SF1-204ENST00000493348 SIRT1Q96EB6 747 aa11.54□□□□□ -0.56
TM4SF1-204ENST00000493348 PRAM1Q96QH2 718 aa11.54□□□□□ -0.56
TM4SF1-204ENST00000493348 ASXL1Q8IXJ9 1541 aa11.54□□□□□ -0.56
TM4SF1-204ENST00000493348 DCCP43146 1447 aa11.53□□□□□ -0.56
TM4SF1-204ENST00000493348 FAM135BQ49AJ0 1406 aa11.53□□□□□ -0.56
TM4SF1-204ENST00000493348 NALCNQ8IZF0 1738 aa11.53□□□□□ -0.56
TM4SF1-204ENST00000493348 DLC1Q96QB1 1528 aa11.53□□□□□ -0.56
TM4SF1-204ENST00000493348 ADGRB1O14514 1584 aa11.53□□□□□ -0.56
TM4SF1-204ENST00000493348 NBPF1Q3BBV0 1214 aa11.52□□□□□ -0.57
TM4SF1-204ENST00000493348 CARD11Q9BXL7 1154 aa11.52□□□□□ -0.57
TM4SF1-204ENST00000493348 SLAIN2Q9P270 581 aa11.52□□□□□ -0.57
TM4SF1-204ENST00000493348 ARHGEF28Q8N1W1 1705 aaKnown RBP11.52□□□□□ -0.57
TM4SF1-204ENST00000493348 PPP4R3CPQ6ZMV5 832 aa11.51□□□□□ -0.57
TM4SF1-204ENST00000493348 ILDR1Q86SU0 546 aaPredicted RBP11.51□□□□□ -0.57
TM4SF1-204ENST00000493348 NBPF8Q3BBV2 869 aa11.49□□□□□ -0.57
TM4SF1-204ENST00000493348 MINK1Q8N4C8 1332 aaPredicted RBP11.49□□□□□ -0.57
TM4SF1-204ENST00000493348 CENPJQ9HC77 1338 aaPredicted RBP11.49□□□□□ -0.57
TM4SF1-204ENST00000493348 RALGAPBQ86X10 1494 aa11.49□□□□□ -0.57
TM4SF1-204ENST00000493348 ROBO1Q9Y6N7 1651 aa11.49□□□□□ -0.57
TM4SF1-204ENST00000493348 PLEKHH1Q9ULM0 1364 aa11.48□□□□□ -0.57
TM4SF1-204ENST00000493348 CDC42BPGQ6DT37 1551 aa11.48□□□□□ -0.57
TM4SF1-204ENST00000493348 QRICH2Q9H0J4 1663 aa11.47□□□□□ -0.57
TM4SF1-204ENST00000493348 NUTM2FA1L443 756 aa11.47□□□□□ -0.57
TM4SF1-204ENST00000493348 HOXD11P31277 338 aaPredicted RBP11.47□□□□□ -0.57
TM4SF1-204ENST00000493348 HIRIP3Q9BW71 556 aaPredicted RBP11.47□□□□□ -0.57
TM4SF1-204ENST00000493348 ESCO1Q5FWF5 840 aa11.46□□□□□ -0.57
TM4SF1-204ENST00000493348 RNF39Q9H2S5 420 aa11.46□□□□□ -0.57
TM4SF1-204ENST00000493348 PHLPP1O60346 1717 aa11.46□□□□□ -0.58
TM4SF1-204ENST00000493348 FMN2Q9NZ56 1722 aa11.46□□□□□ -0.58
TM4SF1-204ENST00000493348 SLC24A1O60721 1099 aa11.45□□□□□ -0.58
TM4SF1-204ENST00000493348 MST1RQ04912 1400 aa11.44□□□□□ -0.58
TM4SF1-204ENST00000493348 GPRASP1Q5JY77 1395 aa11.44□□□□□ -0.58
TM4SF1-204ENST00000493348 WASLO00401 505 aaPredicted RBP11.44□□□□□ -0.58
TM4SF1-204ENST00000493348 SRPK2P78362 688 aaKnown RBP11.44□□□□□ -0.58
TM4SF1-204ENST00000493348 ADGRB2O60241 1585 aa11.44□□□□□ -0.58
TM4SF1-204ENST00000493348 C1orf167Q5SNV9 1468 aa11.44□□□□□ -0.58
TM4SF1-204ENST00000493348 ITSN1Q15811 1721 aa11.43□□□□□ -0.58
TM4SF1-204ENST00000493348 EVC2Q86UK5 1308 aa11.43□□□□□ -0.58
TM4SF1-204ENST00000493348 HSPA1LP34931 641 aa11.43□□□□□ -0.58
TM4SF1-204ENST00000493348 RGPD8O14715 1765 aaPredicted RBP11.43□□□□□ -0.58
TM4SF1-204ENST00000493348 BRINP3Q76B58 766 aa11.42□□□□□ -0.58
TM4SF1-204ENST00000493348 CDK19Q9BWU1 502 aa11.42□□□□□ -0.58
TM4SF1-204ENST00000493348 KIF1AQ12756 1690 aa11.42□□□□□ -0.58
TM4SF1-204ENST00000493348 NPHP3Q7Z494 1330 aa11.41□□□□□ -0.58
TM4SF1-204ENST00000493348 ANKARQ7Z5J8 1434 aa11.41□□□□□ -0.58
TM4SF1-204ENST00000493348 TULP4Q9NRJ4 1543 aa11.4□□□□□ -0.58
TM4SF1-204ENST00000493348 PSME1Q06323 249 aa11.4□□□□□ -0.58
TM4SF1-204ENST00000493348 NGDNQ8NEJ9 315 aaKnown RBP11.4□□□□□ -0.58
TM4SF1-204ENST00000493348 ORAI2Q96SN7 254 aa11.4□□□□□ -0.58
TM4SF1-204ENST00000493348 PHF8Q9UPP1 1060 aa11.4□□□□□ -0.58
TM4SF1-204ENST00000493348 USP47Q96K76 1375 aa11.4□□□□□ -0.59
TM4SF1-204ENST00000493348 NUDT16Q96DE0 195 aaKnown RBP11.39□□□□□ -0.59
TM4SF1-204ENST00000493348 NHSL1Q5SYE7 1610 aa11.38□□□□□ -0.59
TM4SF1-204ENST00000493348 AHDC1Q5TGY3 1603 aaPredicted RBP11.38□□□□□ -0.59
TM4SF1-204ENST00000493348 ST20-MTHFSA0A0A6YYL1 179 aa11.38□□□□□ -0.59
TM4SF1-204ENST00000493348 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
TM4SF1-204ENST00000493348 CDCA8Q53HL2 280 aa11.38□□□□□ -0.59
TM4SF1-204ENST00000493348 PMFBP1Q8TBY8 1022 aa11.38□□□□□ -0.59
TM4SF1-204ENST00000493348 LRRC59Q96AG4 307 aaKnown RBP11.38□□□□□ -0.59
TM4SF1-204ENST00000493348 FOXO3O43524 673 aa11.37□□□□□ -0.59
TM4SF1-204ENST00000493348 TMF1P82094 1093 aa11.37□□□□□ -0.59
TM4SF1-204ENST00000493348 CABP2Q9NPB3 220 aa11.37□□□□□ -0.59
TM4SF1-204ENST00000493348 CCDC61Q9Y6R9 512 aa11.37□□□□□ -0.59
TM4SF1-204ENST00000493348 LMOD2Q6P5Q4 547 aa11.36□□□□□ -0.59
TM4SF1-204ENST00000493348 ATAD2Q6PL18 1390 aa11.36□□□□□ -0.59
TM4SF1-204ENST00000493348 JCADQ9P266 1359 aa11.36□□□□□ -0.59
TM4SF1-204ENST00000493348 SBNO2Q9Y2G9 1366 aa11.36□□□□□ -0.59
TM4SF1-204ENST00000493348 KRT28Q7Z3Y7 464 aa11.35□□□□□ -0.59
TM4SF1-204ENST00000493348 TMC1Q8TDI8 760 aa11.35□□□□□ -0.59
TM4SF1-204ENST00000493348 CNKSR2Q8WXI2 1034 aa11.35□□□□□ -0.59
TM4SF1-204ENST00000493348 USP32Q8NFA0 1604 aa11.35□□□□□ -0.59
TM4SF1-204ENST00000493348 PPIP5K1Q6PFW1 1433 aa11.35□□□□□ -0.59
TM4SF1-204ENST00000493348 ATP7BP35670 1465 aa11.34□□□□□ -0.59
TM4SF1-204ENST00000493348 PAK3O75914 559 aaPredicted RBP11.34□□□□□ -0.59
TM4SF1-204ENST00000493348 ZEB1P37275 1124 aaPredicted RBP11.34□□□□□ -0.59
TM4SF1-204ENST00000493348 HAP1P54257 671 aaPredicted RBP11.34□□□□□ -0.59
TM4SF1-204ENST00000493348 XPCQ01831 940 aaPredicted RBP11.34□□□□□ -0.59
TM4SF1-204ENST00000493348 MEX3CQ5U5Q3 659 aaKnown RBP11.34□□□□□ -0.59
TM4SF1-204ENST00000493348 DDX17Q92841 729 aaKnown RBP11.34□□□□□ -0.59
TM4SF1-204ENST00000493348 COL16A1Q07092 1604 aaPredicted RBP11.34□□□□□ -0.59
TM4SF1-204ENST00000493348 POLR3GLQ9BT43 218 aa11.33□□□□□ -0.6
TM4SF1-204ENST00000493348 SHPRHQ149N8 1683 aa11.33□□□□□ -0.6
TM4SF1-204ENST00000493348 TOPAZ1Q8N9V7 1692 aa11.33□□□□□ -0.6
TM4SF1-204ENST00000493348 PRR36Q9H6K5 1346 aa11.33□□□□□ -0.6
TM4SF1-204ENST00000493348 HDGFL2Q7Z4V5 671 aaPredicted RBP11.32□□□□□ -0.6
TM4SF1-204ENST00000493348 RNF216Q9NWF9 866 aaPredicted RBP11.32□□□□□ -0.6
TM4SF1-204ENST00000493348 SOS2Q07890 1332 aaPredicted RBP11.32□□□□□ -0.6
TM4SF1-204ENST00000493348 NUTM2BA6NNL0 878 aaPredicted RBP11.31□□□□□ -0.6
TM4SF1-204ENST00000493348 NUTM2EB1AL46 878 aaPredicted RBP11.31□□□□□ -0.6
TM4SF1-204ENST00000493348 HSPA5P11021 654 aaKnown RBP11.31□□□□□ -0.6
TM4SF1-204ENST00000493348 NUTM2AQ8IVF1 878 aaPredicted RBP11.31□□□□□ -0.6
TM4SF1-204ENST00000493348 PUS7Q96PZ0 661 aaKnown RBP11.31□□□□□ -0.6
TM4SF1-204ENST00000493348 ZNF692Q9BU19 519 aaPredicted RBP11.31□□□□□ -0.6
TM4SF1-204ENST00000493348 CABP1Q9NZU7 370 aa11.31□□□□□ -0.6
TM4SF1-204ENST00000493348 ACEP12821 1306 aa11.31□□□□□ -0.6
TM4SF1-204ENST00000493348 SPATA31A6Q5VVP1 1343 aa11.31□□□□□ -0.6
TM4SF1-204ENST00000493348 ARHGEF10O15013 1369 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms