RNA–Protein interactions for RNA: ENST00000493051.1

NPHP1-210, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-210ENST00000493051 DISP3Q9P2K9 1392 aa13.21□□□□□ -0.29
NPHP1-210ENST00000493051 PRAM1Q96QH2 718 aa13.21□□□□□ -0.29
NPHP1-210ENST00000493051 TRAK1Q9UPV9 953 aa13.21□□□□□ -0.29
NPHP1-210ENST00000493051 MST1RQ04912 1400 aa13.21□□□□□ -0.3
NPHP1-210ENST00000493051 ROBO1Q9Y6N7 1651 aa13.2□□□□□ -0.3
NPHP1-210ENST00000493051 C1orf167Q5SNV9 1468 aa13.19□□□□□ -0.3
NPHP1-210ENST00000493051 ORAI2Q96SN7 254 aa13.19□□□□□ -0.3
NPHP1-210ENST00000493051 PLEKHH1Q9ULM0 1364 aa13.19□□□□□ -0.3
NPHP1-210ENST00000493051 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
NPHP1-210ENST00000493051 LAMC1P11047 1609 aa13.18□□□□□ -0.3
NPHP1-210ENST00000493051 SAFB2Q14151 953 aaKnown RBP eCLIP13.18□□□□□ -0.3
NPHP1-210ENST00000493051 ESCO1Q5FWF5 840 aa13.18□□□□□ -0.3
NPHP1-210ENST00000493051 LRRC59Q96AG4 307 aaKnown RBP13.18□□□□□ -0.3
NPHP1-210ENST00000493051 PCGF6Q9BYE7 350 aa13.17□□□□□ -0.3
NPHP1-210ENST00000493051 JCADQ9P266 1359 aa13.17□□□□□ -0.3
NPHP1-210ENST00000493051 NBPF1Q3BBV0 1214 aa13.16□□□□□ -0.3
NPHP1-210ENST00000493051 ADGRB1O14514 1584 aa13.15□□□□□ -0.3
NPHP1-210ENST00000493051 NUTM2FA1L443 756 aa13.15□□□□□ -0.3
NPHP1-210ENST00000493051 DLC1Q96QB1 1528 aa13.14□□□□□ -0.31
NPHP1-210ENST00000493051 SPATA31A6Q5VVP1 1343 aa13.13□□□□□ -0.31
NPHP1-210ENST00000493051 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
NPHP1-210ENST00000493051 NALCNQ8IZF0 1738 aa13.13□□□□□ -0.31
NPHP1-210ENST00000493051 FOXO3O43524 673 aa13.13□□□□□ -0.31
NPHP1-210ENST00000493051 DDX17Q92841 729 aaKnown RBP13.13□□□□□ -0.31
NPHP1-210ENST00000493051 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
NPHP1-210ENST00000493051 CDC42BPGQ6DT37 1551 aa13.12□□□□□ -0.31
NPHP1-210ENST00000493051 TONSLQ96HA7 1378 aa13.12□□□□□ -0.31
NPHP1-210ENST00000493051 WASLO00401 505 aaPredicted RBP13.12□□□□□ -0.31
NPHP1-210ENST00000493051 HIRIP3Q9BW71 556 aaPredicted RBP13.12□□□□□ -0.31
NPHP1-210ENST00000493051 KNDC1Q76NI1 1749 aa13.12□□□□□ -0.31
NPHP1-210ENST00000493051 AHDC1Q5TGY3 1603 aaPredicted RBP13.12□□□□□ -0.31
NPHP1-210ENST00000493051 MINK1Q8N4C8 1332 aaPredicted RBP13.12□□□□□ -0.31
NPHP1-210ENST00000493051 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
NPHP1-210ENST00000493051 CNKSR2Q8WXI2 1034 aa13.11□□□□□ -0.31
NPHP1-210ENST00000493051 PHLPP1O60346 1717 aa13.1□□□□□ -0.31
NPHP1-210ENST00000493051 PHF8Q9UPP1 1060 aa13.1□□□□□ -0.31
NPHP1-210ENST00000493051 EIF3AQ14152 1382 aaKnown RBP13.09□□□□□ -0.31
NPHP1-210ENST00000493051 MED1Q15648 1581 aaPredicted RBP13.09□□□□□ -0.31
NPHP1-210ENST00000493051 RNF216Q9NWF9 866 aaPredicted RBP13.09□□□□□ -0.31
NPHP1-210ENST00000493051 COL16A1Q07092 1604 aaPredicted RBP13.09□□□□□ -0.31
NPHP1-210ENST00000493051 CLSPNQ9HAW4 1339 aa13.09□□□□□ -0.31
NPHP1-210ENST00000493051 PSME1Q06323 249 aa13.08□□□□□ -0.32
NPHP1-210ENST00000493051 NBPF8Q3BBV2 869 aa13.08□□□□□ -0.32
NPHP1-210ENST00000493051 CENPJQ9HC77 1338 aaPredicted RBP13.08□□□□□ -0.32
NPHP1-210ENST00000493051 NUTM2BA6NNL0 878 aaPredicted RBP13.07□□□□□ -0.32
NPHP1-210ENST00000493051 NUTM2EB1AL46 878 aaPredicted RBP13.07□□□□□ -0.32
NPHP1-210ENST00000493051 MEX3CQ5U5Q3 659 aaKnown RBP13.07□□□□□ -0.32
NPHP1-210ENST00000493051 KRT28Q7Z3Y7 464 aa13.07□□□□□ -0.32
NPHP1-210ENST00000493051 NUTM2AQ8IVF1 878 aaPredicted RBP13.07□□□□□ -0.32
NPHP1-210ENST00000493051 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
NPHP1-210ENST00000493051 TIMELESSQ9UNS1 1208 aa13.07□□□□□ -0.32
NPHP1-210ENST00000493051 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
NPHP1-210ENST00000493051 ANKARQ7Z5J8 1434 aa13.06□□□□□ -0.32
NPHP1-210ENST00000493051 KIAA1210Q9ULL0 1709 aa13.06□□□□□ -0.32
NPHP1-210ENST00000493051 XPCQ01831 940 aaPredicted RBP13.06□□□□□ -0.32
NPHP1-210ENST00000493051 ILDR2Q71H61 639 aa13.06□□□□□ -0.32
NPHP1-210ENST00000493051 NUDT16Q96DE0 195 aaKnown RBP13.06□□□□□ -0.32
NPHP1-210ENST00000493051 PMFBP1Q8TBY8 1022 aa13.05□□□□□ -0.32
NPHP1-210ENST00000493051 PNPLA6Q8IY17 1366 aa13.05□□□□□ -0.32
NPHP1-210ENST00000493051 NHSL1Q5SYE7 1610 aa13.04□□□□□ -0.32
NPHP1-210ENST00000493051 CARD11Q9BXL7 1154 aa13.04□□□□□ -0.32
NPHP1-210ENST00000493051 RGS17Q9UGC6 210 aaPredicted RBP13.04□□□□□ -0.32
NPHP1-210ENST00000493051 CCDC61Q9Y6R9 512 aa13.04□□□□□ -0.32
NPHP1-210ENST00000493051 NGDNQ8NEJ9 315 aaKnown RBP13.03□□□□□ -0.32
NPHP1-210ENST00000493051 SPATA31A3Q5VYP0 1347 aa13.03□□□□□ -0.32
NPHP1-210ENST00000493051 PRR36Q9H6K5 1346 aa13.03□□□□□ -0.32
NPHP1-210ENST00000493051 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
NPHP1-210ENST00000493051 FMN2Q9NZ56 1722 aa13.02□□□□□ -0.32
NPHP1-210ENST00000493051 SRPK2P78362 688 aaKnown RBP13.02□□□□□ -0.33
NPHP1-210ENST00000493051 ZNF772Q68DY9 489 aaPredicted RBP13.02□□□□□ -0.33
NPHP1-210ENST00000493051 CCER1Q8TC90 406 aaPredicted RBP13.02□□□□□ -0.33
NPHP1-210ENST00000493051 GPRASP1Q5JY77 1395 aa13.02□□□□□ -0.33
NPHP1-210ENST00000493051 EVC2Q86UK5 1308 aa13.01□□□□□ -0.33
NPHP1-210ENST00000493051 PXDNQ92626 1479 aa13.01□□□□□ -0.33
NPHP1-210ENST00000493051 SHPRHQ149N8 1683 aa13□□□□□ -0.33
NPHP1-210ENST00000493051 TULP4Q9NRJ4 1543 aa13□□□□□ -0.33
NPHP1-210ENST00000493051 SBNO1A3KN83 1393 aa13□□□□□ -0.33
NPHP1-210ENST00000493051 PLEKHG3A1L390 1219 aa13□□□□□ -0.33
NPHP1-210ENST00000493051 NGLY1Q96IV0 654 aa13□□□□□ -0.33
NPHP1-210ENST00000493051 ADAMTS2O95450 1211 aa12.99□□□□□ -0.33
NPHP1-210ENST00000493051 LMOD2Q6P5Q4 547 aa12.99□□□□□ -0.33
NPHP1-210ENST00000493051 POTEAQ6S8J7 498 aa12.99□□□□□ -0.33
NPHP1-210ENST00000493051 LRP6O75581 1613 aa12.99□□□□□ -0.33
NPHP1-210ENST00000493051 SLC24A1O60721 1099 aa12.98□□□□□ -0.33
NPHP1-210ENST00000493051 C8orf37Q96NL8 207 aa12.98□□□□□ -0.33
NPHP1-210ENST00000493051 CABP2Q9NPB3 220 aa12.98□□□□□ -0.33
NPHP1-210ENST00000493051 ARHGEF28Q8N1W1 1705 aaKnown RBP12.98□□□□□ -0.33
NPHP1-210ENST00000493051 TRPM1Q7Z4N2 1603 aa12.98□□□□□ -0.33
NPHP1-210ENST00000493051 ARHGEF10O15013 1369 aa12.97□□□□□ -0.33
NPHP1-210ENST00000493051 ACEP12821 1306 aa12.97□□□□□ -0.33
NPHP1-210ENST00000493051 KIF1AQ12756 1690 aa12.97□□□□□ -0.33
NPHP1-210ENST00000493051 SOCS7O14512 581 aa12.97□□□□□ -0.33
NPHP1-210ENST00000493051 PAK3O75914 559 aaPredicted RBP12.97□□□□□ -0.33
NPHP1-210ENST00000493051 AFF2P51816 1311 aa12.96□□□□□ -0.33
NPHP1-210ENST00000493051 HAP1P54257 671 aaPredicted RBP12.96□□□□□ -0.33
NPHP1-210ENST00000493051 CABP1Q9NZU7 370 aa12.96□□□□□ -0.33
NPHP1-210ENST00000493051 ATP7BP35670 1465 aa12.96□□□□□ -0.34
NPHP1-210ENST00000493051 RALGAPBQ86X10 1494 aa12.96□□□□□ -0.34
NPHP1-210ENST00000493051 TNS3Q68CZ2 1445 aa12.96□□□□□ -0.34
NPHP1-210ENST00000493051 FNBP4Q8N3X1 1017 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms