RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 PPARGC1BQ86YN6 1023 aaKnown RBP20.82■□□□□ 0.92
GPNMB-213ENST00000492512 ZRANB1Q9UGI0 708 aa20.82■□□□□ 0.92
GPNMB-213ENST00000492512 NPHP3Q7Z494 1330 aa20.8■□□□□ 0.92
GPNMB-213ENST00000492512 MARF1Q9Y4F3 1742 aaKnown RBP20.79■□□□□ 0.92
GPNMB-213ENST00000492512 ESCO1Q5FWF5 840 aa20.79■□□□□ 0.92
GPNMB-213ENST00000492512 MYOM2P54296 1465 aa20.79■□□□□ 0.92
GPNMB-213ENST00000492512 RPGRIP1LQ68CZ1 1315 aa20.78■□□□□ 0.92
GPNMB-213ENST00000492512 PPLO60437 1756 aa20.77■□□□□ 0.92
GPNMB-213ENST00000492512 CCDC125Q86Z20 511 aa20.77■□□□□ 0.92
GPNMB-213ENST00000492512 CDC42BPGQ6DT37 1551 aa20.76■□□□□ 0.91
GPNMB-213ENST00000492512 NAIPQ13075 1403 aa20.76■□□□□ 0.91
GPNMB-213ENST00000492512 BCL9LQ86UU0 1499 aa20.75■□□□□ 0.91
GPNMB-213ENST00000492512 PXDNQ92626 1479 aa20.75■□□□□ 0.91
GPNMB-213ENST00000492512 FOXO3O43524 673 aa20.74■□□□□ 0.91
GPNMB-213ENST00000492512 XPCQ01831 940 aaPredicted RBP20.74■□□□□ 0.91
GPNMB-213ENST00000492512 GJD4Q96KN9 370 aaPredicted RBP20.73■□□□□ 0.91
GPNMB-213ENST00000492512 LRPPRCP42704 1394 aaKnown RBP20.72■□□□□ 0.91
GPNMB-213ENST00000492512 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.7■□□□□ 0.9
GPNMB-213ENST00000492512 NUTM2FA1L443 756 aa20.7■□□□□ 0.9
GPNMB-213ENST00000492512 SLC4A1APQ9BWU0 796 aaKnown RBP20.7■□□□□ 0.9
GPNMB-213ENST00000492512 STK26Q9P289 416 aa20.68■□□□□ 0.9
GPNMB-213ENST00000492512 RRBP1Q9P2E9 1410 aaKnown RBP20.67■□□□□ 0.9
GPNMB-213ENST00000492512 WAPLQ7Z5K2 1190 aa20.66■□□□□ 0.9
GPNMB-213ENST00000492512 UNC5CLQ8IV45 518 aa20.66■□□□□ 0.9
GPNMB-213ENST00000492512 GLI3P10071 1580 aa20.65■□□□□ 0.9
GPNMB-213ENST00000492512 RALGAPBQ86X10 1494 aa20.65■□□□□ 0.9
GPNMB-213ENST00000492512 ADGRF5Q8IZF2 1346 aa20.65■□□□□ 0.9
GPNMB-213ENST00000492512 TECPR2O15040 1411 aa20.64■□□□□ 0.89
GPNMB-213ENST00000492512 BLMP54132 1417 aaPredicted RBP20.64■□□□□ 0.89
GPNMB-213ENST00000492512 BRWD3Q6RI45 1802 aa20.64■□□□□ 0.89
GPNMB-213ENST00000492512 SLIT2O94813 1529 aa20.63■□□□□ 0.89
GPNMB-213ENST00000492512 SPATA31A3Q5VYP0 1347 aa20.63■□□□□ 0.89
GPNMB-213ENST00000492512 KIF1AQ12756 1690 aa20.63■□□□□ 0.89
GPNMB-213ENST00000492512 FMN2Q9NZ56 1722 aa20.62■□□□□ 0.89
GPNMB-213ENST00000492512 CCDC144AA2RUR9 1427 aa20.61■□□□□ 0.89
GPNMB-213ENST00000492512 KNDC1Q76NI1 1749 aa20.61■□□□□ 0.89
GPNMB-213ENST00000492512 USP32Q8NFA0 1604 aa20.61■□□□□ 0.89
GPNMB-213ENST00000492512 HAP1P54257 671 aaPredicted RBP20.61■□□□□ 0.89
GPNMB-213ENST00000492512 RGL3Q3MIN7 710 aa20.61■□□□□ 0.89
GPNMB-213ENST00000492512 ABCC11Q96J66 1382 aa20.6■□□□□ 0.89
GPNMB-213ENST00000492512 PLEKHH1Q9ULM0 1364 aa20.6■□□□□ 0.89
GPNMB-213ENST00000492512 SF3B2Q13435 895 aaKnown RBP20.6■□□□□ 0.89
GPNMB-213ENST00000492512 TMEM132EQ6IEE7 984 aa20.6■□□□□ 0.89
GPNMB-213ENST00000492512 KRT28Q7Z3Y7 464 aa20.6■□□□□ 0.89
GPNMB-213ENST00000492512 ANKRD30BQ9BXX2 1392 aa20.59■□□□□ 0.89
GPNMB-213ENST00000492512 IFT172Q9UG01 1749 aa20.59■□□□□ 0.89
GPNMB-213ENST00000492512 DEFB132Q7Z7B7 95 aa20.58■□□□□ 0.89
GPNMB-213ENST00000492512 SEPT12Q8IYM1 358 aa20.57■□□□□ 0.88
GPNMB-213ENST00000492512 RGPD8O14715 1765 aaPredicted RBP20.57■□□□□ 0.88
GPNMB-213ENST00000492512 CCDC9Q9Y3X0 531 aaKnown RBP20.56■□□□□ 0.88
GPNMB-213ENST00000492512 SPATA31E1Q6ZUB1 1445 aa20.55■□□□□ 0.88
GPNMB-213ENST00000492512 YTHDC2Q9H6S0 1430 aaKnown RBP20.55■□□□□ 0.88
GPNMB-213ENST00000492512 PSME1Q06323 249 aa20.55■□□□□ 0.88
GPNMB-213ENST00000492512 VPS72Q15906 364 aa20.55■□□□□ 0.88
GPNMB-213ENST00000492512 NWD2Q9ULI1 1742 aa20.55■□□□□ 0.88
GPNMB-213ENST00000492512 PLCH1Q4KWH8 1693 aa20.54■□□□□ 0.88
GPNMB-213ENST00000492512 TNS3Q68CZ2 1445 aa20.54■□□□□ 0.88
GPNMB-213ENST00000492512 PLEKHG5O94827 1062 aa20.54■□□□□ 0.88
GPNMB-213ENST00000492512 CABLES1Q8TDN4 633 aa20.54■□□□□ 0.88
GPNMB-213ENST00000492512 PHF8Q9UPP1 1060 aa20.54■□□□□ 0.88
GPNMB-213ENST00000492512 PIK3C2GO75747 1445 aa20.53■□□□□ 0.88
GPNMB-213ENST00000492512 LMOD2Q6P5Q4 547 aa20.52■□□□□ 0.88
GPNMB-213ENST00000492512 KRT27Q7Z3Y8 459 aa20.51■□□□□ 0.87
GPNMB-213ENST00000492512 ABCA3Q99758 1704 aa20.5■□□□□ 0.87
GPNMB-213ENST00000492512 ONECUT3O60422 494 aaPredicted RBP20.5■□□□□ 0.87
GPNMB-213ENST00000492512 SIRT1Q96EB6 747 aa20.5■□□□□ 0.87
GPNMB-213ENST00000492512 A0A0G2JS52 829 aa20.49■□□□□ 0.87
GPNMB-213ENST00000492512 MYT1Q01538 1121 aa20.49■□□□□ 0.87
GPNMB-213ENST00000492512 LRP5O75197 1615 aa20.49■□□□□ 0.87
GPNMB-213ENST00000492512 SBNO1A3KN83 1393 aa20.48■□□□□ 0.87
GPNMB-213ENST00000492512 ARHGEF10O15013 1369 aa20.48■□□□□ 0.87
GPNMB-213ENST00000492512 NRXN1Q9ULB1 1477 aa20.47■□□□□ 0.87
GPNMB-213ENST00000492512 BAG6P46379 1132 aa20.46■□□□□ 0.87
GPNMB-213ENST00000492512 MPHOSPH9Q99550 1183 aa20.46■□□□□ 0.87
GPNMB-213ENST00000492512 DHX57Q6P158 1386 aaKnown RBP20.46■□□□□ 0.87
GPNMB-213ENST00000492512 SAFB2Q14151 953 aaKnown RBP eCLIP20.45■□□□□ 0.86
GPNMB-213ENST00000492512 C14orf93Q9H972 538 aaKnown RBP20.45■□□□□ 0.86
GPNMB-213ENST00000492512 FAM83GA6ND36 823 aa20.44■□□□□ 0.86
GPNMB-213ENST00000492512 PSDA5PKW4 1024 aaPredicted RBP20.43■□□□□ 0.86
GPNMB-213ENST00000492512 PMFBP1Q8TBY8 1022 aa20.43■□□□□ 0.86
GPNMB-213ENST00000492512 PRAM1Q96QH2 718 aa20.43■□□□□ 0.86
GPNMB-213ENST00000492512 NRAPQ86VF7 1730 aa20.42■□□□□ 0.86
GPNMB-213ENST00000492512 FAM98CQ17RN3 349 aaKnown RBP20.42■□□□□ 0.86
GPNMB-213ENST00000492512 CFAP70Q5T0N1 1121 aa20.42■□□□□ 0.86
GPNMB-213ENST00000492512 BTG4Q9NY30 223 aa20.41■□□□□ 0.86
GPNMB-213ENST00000492512 ANKARQ7Z5J8 1434 aa20.4■□□□□ 0.86
GPNMB-213ENST00000492512 POGKQ9P215 609 aa20.4■□□□□ 0.86
GPNMB-213ENST00000492512 HRCP23327 699 aa20.39■□□□□ 0.85
GPNMB-213ENST00000492512 COL14A1Q05707 1796 aaKnown RBP20.39■□□□□ 0.85
GPNMB-213ENST00000492512 RGPD1P0DJD0 1748 aa20.39■□□□□ 0.85
GPNMB-213ENST00000492512 TRPM3Q9HCF6 1732 aaPredicted RBP20.38■□□□□ 0.85
GPNMB-213ENST00000492512 GPRASP1Q5JY77 1395 aa20.36■□□□□ 0.85
GPNMB-213ENST00000492512 ALS2Q96Q42 1657 aa20.36■□□□□ 0.85
GPNMB-213ENST00000492512 EN1Q05925 392 aaPredicted RBP20.36■□□□□ 0.85
GPNMB-213ENST00000492512 DLC1Q96QB1 1528 aa20.36■□□□□ 0.85
GPNMB-213ENST00000492512 ADGRB2O60241 1585 aa20.35■□□□□ 0.85
GPNMB-213ENST00000492512 FAM182BQ5T319 152 aa20.34■□□□□ 0.85
GPNMB-213ENST00000492512 HIRIP3Q9BW71 556 aaPredicted RBP20.33■□□□□ 0.85
GPNMB-213ENST00000492512 SPATA31A5Q5VU36 1347 aa20.32■□□□□ 0.84
GPNMB-213ENST00000492512 SPATA31A7Q8IWB4 1347 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms