RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 PLEKHH1Q9ULM0 1364 aa19.03■□□□□ 0.64
PTPRE-210ENST00000492479 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.03■□□□□ 0.64
PTPRE-210ENST00000492479 SENP3Q9H4L4 574 aaPredicted RBP19.02■□□□□ 0.64
PTPRE-210ENST00000492479 EVC2Q86UK5 1308 aa19.01■□□□□ 0.63
PTPRE-210ENST00000492479 KCNA6P17658 529 aa19.01■□□□□ 0.63
PTPRE-210ENST00000492479 DIEXFQ68CQ4 756 aaKnown RBP19.01■□□□□ 0.63
PTPRE-210ENST00000492479 POGKQ9P215 609 aa19.01■□□□□ 0.63
PTPRE-210ENST00000492479 NINLQ9Y2I6 1382 aa18.99■□□□□ 0.63
PTPRE-210ENST00000492479 DDX10Q13206 875 aaKnown RBP18.98■□□□□ 0.63
PTPRE-210ENST00000492479 WAPLQ7Z5K2 1190 aa18.98■□□□□ 0.63
PTPRE-210ENST00000492479 NCOA3Q9Y6Q9 1424 aa18.97■□□□□ 0.63
PTPRE-210ENST00000492479 STRCP1A6NGW2 1772 aa18.96■□□□□ 0.63
PTPRE-210ENST00000492479 ATAD2Q6PL18 1390 aa18.96■□□□□ 0.63
PTPRE-210ENST00000492479 CDC42BPGQ6DT37 1551 aa18.96■□□□□ 0.63
PTPRE-210ENST00000492479 MINK1Q8N4C8 1332 aaPredicted RBP18.94■□□□□ 0.62
PTPRE-210ENST00000492479 NALCNQ8IZF0 1738 aa18.94■□□□□ 0.62
PTPRE-210ENST00000492479 ADGRL3Q9HAR2 1447 aa18.93■□□□□ 0.62
PTPRE-210ENST00000492479 WASLO00401 505 aaPredicted RBP18.93■□□□□ 0.62
PTPRE-210ENST00000492479 DMRT2Q9Y5R5 561 aa18.93■□□□□ 0.62
PTPRE-210ENST00000492479 TOPAZ1Q8N9V7 1692 aa18.92■□□□□ 0.62
PTPRE-210ENST00000492479 SAFB2Q14151 953 aaKnown RBP eCLIP18.91■□□□□ 0.62
PTPRE-210ENST00000492479 FMN2Q9NZ56 1722 aa18.91■□□□□ 0.62
PTPRE-210ENST00000492479 ATP7BP35670 1465 aa18.9■□□□□ 0.62
PTPRE-210ENST00000492479 CDK19Q9BWU1 502 aa18.9■□□□□ 0.62
PTPRE-210ENST00000492479 ANKARQ7Z5J8 1434 aa18.9■□□□□ 0.62
PTPRE-210ENST00000492479 USP32Q8NFA0 1604 aa18.89■□□□□ 0.61
PTPRE-210ENST00000492479 PER1O15534 1290 aaPredicted RBP18.88■□□□□ 0.61
PTPRE-210ENST00000492479 ITSN1Q15811 1721 aa18.88■□□□□ 0.61
PTPRE-210ENST00000492479 DCCP43146 1447 aa18.87■□□□□ 0.61
PTPRE-210ENST00000492479 NPC1L1Q9UHC9 1359 aa18.87■□□□□ 0.61
PTPRE-210ENST00000492479 CD163L1Q9NR16 1453 aa18.86■□□□□ 0.61
PTPRE-210ENST00000492479 ANKRD36BQ8N2N9 1353 aa18.86■□□□□ 0.61
PTPRE-210ENST00000492479 CABP2Q9NPB3 220 aa18.86■□□□□ 0.61
PTPRE-210ENST00000492479 SRPK2P78362 688 aaKnown RBP18.85■□□□□ 0.61
PTPRE-210ENST00000492479 XIRP1Q702N8 1843 aaKnown RBP18.85■□□□□ 0.61
PTPRE-210ENST00000492479 POLR3GLQ9BT43 218 aa18.84■□□□□ 0.61
PTPRE-210ENST00000492479 PANK3Q9H999 370 aa18.84■□□□□ 0.61
PTPRE-210ENST00000492479 KTN1Q86UP2 1357 aaKnown RBP18.83■□□□□ 0.61
PTPRE-210ENST00000492479 LRRC7Q96NW7 1537 aa18.83■□□□□ 0.6
PTPRE-210ENST00000492479 AKAP12Q02952 1782 aa18.83■□□□□ 0.6
PTPRE-210ENST00000492479 CPSF1Q10570 1443 aaKnown RBP18.83■□□□□ 0.6
PTPRE-210ENST00000492479 PRR36Q9H6K5 1346 aa18.82■□□□□ 0.6
PTPRE-210ENST00000492479 CCDC61Q9Y6R9 512 aa18.82■□□□□ 0.6
PTPRE-210ENST00000492479 MON2Q7Z3U7 1717 aa18.81■□□□□ 0.6
PTPRE-210ENST00000492479 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
PTPRE-210ENST00000492479 TMEM94Q12767 1356 aa18.81■□□□□ 0.6
PTPRE-210ENST00000492479 PLEKHG3A1L390 1219 aa18.8■□□□□ 0.6
PTPRE-210ENST00000492479 PROSER2Q86WR7 435 aaPredicted RBP18.8■□□□□ 0.6
PTPRE-210ENST00000492479 SLC12A5Q9H2X9 1139 aa18.8■□□□□ 0.6
PTPRE-210ENST00000492479 PPIP5K1Q6PFW1 1433 aa18.8■□□□□ 0.6
PTPRE-210ENST00000492479 A0A1W2PP64 1363 aa18.79■□□□□ 0.6
PTPRE-210ENST00000492479 C19orf44Q9H6X5 657 aa18.78■□□□□ 0.6
PTPRE-210ENST00000492479 TERF2IPQ9NYB0 399 aa18.78■□□□□ 0.6
PTPRE-210ENST00000492479 RGPD8O14715 1765 aaPredicted RBP18.78■□□□□ 0.6
PTPRE-210ENST00000492479 ZNF335Q9H4Z2 1342 aaPredicted RBP18.77■□□□□ 0.6
PTPRE-210ENST00000492479 ANP32CO43423 234 aa18.77■□□□□ 0.6
PTPRE-210ENST00000492479 AMER1Q5JTC6 1135 aaPredicted RBP18.77■□□□□ 0.6
PTPRE-210ENST00000492479 CARD14Q9BXL6 1004 aa18.77■□□□□ 0.6
PTPRE-210ENST00000492479 POLR3AO14802 1390 aaPredicted RBP18.77■□□□□ 0.6
PTPRE-210ENST00000492479 LTBP4Q8N2S1 1624 aa18.77■□□□□ 0.6
PTPRE-210ENST00000492479 PRKRIP1Q9H875 184 aaPredicted RBP18.76■□□□□ 0.59
PTPRE-210ENST00000492479 NSD2O96028 1365 aa18.76■□□□□ 0.59
PTPRE-210ENST00000492479 PARD3Q8TEW0 1356 aa18.76■□□□□ 0.59
PTPRE-210ENST00000492479 NRKQ7Z2Y5 1582 aa18.76■□□□□ 0.59
PTPRE-210ENST00000492479 MIER1Q8N108 512 aa18.75■□□□□ 0.59
PTPRE-210ENST00000492479 TMC1Q8TDI8 760 aa18.75■□□□□ 0.59
PTPRE-210ENST00000492479 CABP1Q9NZU7 370 aa18.75■□□□□ 0.59
PTPRE-210ENST00000492479 KNSTRNQ9Y448 316 aa18.75■□□□□ 0.59
PTPRE-210ENST00000492479 NSD3Q9BZ95 1437 aa18.74■□□□□ 0.59
PTPRE-210ENST00000492479 EDC4Q6P2E9 1401 aaKnown RBP18.74■□□□□ 0.59
PTPRE-210ENST00000492479 RALBP1Q15311 655 aa18.73■□□□□ 0.59
PTPRE-210ENST00000492479 HDGFL2Q7Z4V5 671 aaPredicted RBP18.73■□□□□ 0.59
PTPRE-210ENST00000492479 ANKRD26Q9UPS8 1709 aa18.73■□□□□ 0.59
PTPRE-210ENST00000492479 MST1RQ04912 1400 aa18.73■□□□□ 0.59
PTPRE-210ENST00000492479 SSH2Q76I76 1423 aa18.73■□□□□ 0.59
PTPRE-210ENST00000492479 KIF1AQ12756 1690 aa18.73■□□□□ 0.59
PTPRE-210ENST00000492479 BRD4O60885 1362 aaPredicted RBP18.72■□□□□ 0.59
PTPRE-210ENST00000492479 CCER2I3L3R5 266 aa18.72■□□□□ 0.59
PTPRE-210ENST00000492479 ZNF692Q9BU19 519 aaPredicted RBP18.72■□□□□ 0.59
PTPRE-210ENST00000492479 MSH6P52701 1360 aa18.71■□□□□ 0.59
PTPRE-210ENST00000492479 KIF20BQ96Q89 1820 aa18.71■□□□□ 0.59
PTPRE-210ENST00000492479 C1orf167Q5SNV9 1468 aa18.71■□□□□ 0.59
PTPRE-210ENST00000492479 CGNL1Q0VF96 1302 aa18.7■□□□□ 0.58
PTPRE-210ENST00000492479 USP6P35125 1406 aa18.69■□□□□ 0.58
PTPRE-210ENST00000492479 CADPS2Q86UW7 1296 aa18.69■□□□□ 0.58
PTPRE-210ENST00000492479 RBM33Q96EV2 1170 aaKnown RBP18.68■□□□□ 0.58
PTPRE-210ENST00000492479 USP54Q70EL1 1684 aa18.68■□□□□ 0.58
PTPRE-210ENST00000492479 AEBP2Q6ZN18 517 aaPredicted RBP18.67■□□□□ 0.58
PTPRE-210ENST00000492479 C14orf37Q86TY3 774 aa18.67■□□□□ 0.58
PTPRE-210ENST00000492479 ACEP12821 1306 aa18.67■□□□□ 0.58
PTPRE-210ENST00000492479 ATF3P18847 181 aa18.65■□□□□ 0.58
PTPRE-210ENST00000492479 PHF8Q9UPP1 1060 aa18.64■□□□□ 0.57
PTPRE-210ENST00000492479 MYBBP1AQ9BQG0 1328 aaKnown RBP18.64■□□□□ 0.57
PTPRE-210ENST00000492479 TTC21AQ8NDW8 1320 aa18.63■□□□□ 0.57
PTPRE-210ENST00000492479 IQSEC2Q5JU85 1478 aa18.63■□□□□ 0.57
PTPRE-210ENST00000492479 FYB1O15117 783 aa18.62■□□□□ 0.57
PTPRE-210ENST00000492479 TRPM3Q9HCF6 1732 aaPredicted RBP18.61■□□□□ 0.57
PTPRE-210ENST00000492479 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
PTPRE-210ENST00000492479 NUTM2FA1L443 756 aa18.61■□□□□ 0.57
PTPRE-210ENST00000492479 USP31Q70CQ4 1352 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms