RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 FECHP22830 423 aa7.48□□□□□ -1.21
HMGB1P30-201ENST00000492455 PLCB2Q00722 1185 aa7.48□□□□□ -1.21
HMGB1P30-201ENST00000492455 TRIM32Q13049 653 aa7.48□□□□□ -1.21
HMGB1P30-201ENST00000492455 HIC1Q14526 733 aa7.48□□□□□ -1.21
HMGB1P30-201ENST00000492455 MSS51Q4VC12 460 aa7.48□□□□□ -1.21
HMGB1P30-201ENST00000492455 SULF1Q8IWU6 871 aa7.48□□□□□ -1.21
HMGB1P30-201ENST00000492455 FAM160A2Q8N612 972 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P30-201ENST00000492455 PRDM9Q9NQV7 894 aa7.48□□□□□ -1.21
HMGB1P30-201ENST00000492455 MRGPRX2Q96LB1 330 aa7.47□□□□□ -1.21
HMGB1P30-201ENST00000492455 BRICD5Q6PL45 260 aa7.46□□□□□ -1.22
HMGB1P30-201ENST00000492455 KCNV2Q8TDN2 545 aa7.46□□□□□ -1.22
HMGB1P30-201ENST00000492455 J3QL48 77 aa7.45□□□□□ -1.22
HMGB1P30-201ENST00000492455 Q3C1V9 767 aa7.45□□□□□ -1.22
HMGB1P30-201ENST00000492455 GCGRP47871 477 aa7.44□□□□□ -1.22
HMGB1P30-201ENST00000492455 P3H3Q8IVL6 736 aa7.43□□□□□ -1.22
HMGB1P30-201ENST00000492455 ZSCAN1Q8NBB4 408 aa7.43□□□□□ -1.22
HMGB1P30-201ENST00000492455 IRF7Q92985 503 aa7.43□□□□□ -1.22
HMGB1P30-201ENST00000492455 HPS1Q92902 700 aa7.42□□□□□ -1.22
HMGB1P30-201ENST00000492455 NXF1Q9UBU9 619 aaKnown RBP7.42□□□□□ -1.22
HMGB1P30-201ENST00000492455 LCE2CQ5TA81 110 aa7.41□□□□□ -1.22
HMGB1P30-201ENST00000492455 RNF19BQ6ZMZ0 732 aa7.41□□□□□ -1.22
HMGB1P30-201ENST00000492455 NPAS3Q8IXF0 933 aa7.4□□□□□ -1.22
HMGB1P30-201ENST00000492455 GNPATO15228 680 aa7.39□□□□□ -1.23
HMGB1P30-201ENST00000492455 ALDH1A1P00352 501 aa7.39□□□□□ -1.23
HMGB1P30-201ENST00000492455 MMP16P51512 607 aa7.39□□□□□ -1.23
HMGB1P30-201ENST00000492455 WNT7BP56706 349 aa7.39□□□□□ -1.23
HMGB1P30-201ENST00000492455 RC3H1Q5TC82 1133 aaKnown RBP7.39□□□□□ -1.23
HMGB1P30-201ENST00000492455 CCDC24Q8N4L8 307 aa7.39□□□□□ -1.23
HMGB1P30-201ENST00000492455 GMPRP36959 345 aa7.38□□□□□ -1.23
HMGB1P30-201ENST00000492455 SMYD5Q6GMV2 418 aa7.38□□□□□ -1.23
HMGB1P30-201ENST00000492455 SEMA3EO15041 775 aa7.37□□□□□ -1.23
HMGB1P30-201ENST00000492455 USB1Q9BQ65 265 aaKnown RBP7.37□□□□□ -1.23
HMGB1P30-201ENST00000492455 NLRP7Q8WX94 980 aa7.36□□□□□ -1.23
HMGB1P30-201ENST00000492455 DXOO77932 396 aaKnown RBP7.35□□□□□ -1.23
HMGB1P30-201ENST00000492455 WASF2Q9Y6W5 498 aa7.35□□□□□ -1.23
HMGB1P30-201ENST00000492455 LOC100996750A0A140TA64 210 aa7.33□□□□□ -1.24
HMGB1P30-201ENST00000492455 CAPN5O15484 640 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P30-201ENST00000492455 KRTAP4-6Q9BYQ5 205 aa7.33□□□□□ -1.24
HMGB1P30-201ENST00000492455 H3BM21 787 aa7.32□□□□□ -1.24
HMGB1P30-201ENST00000492455 BMP1P13497 986 aa7.32□□□□□ -1.24
HMGB1P30-201ENST00000492455 HAP1P54257 671 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P30-201ENST00000492455 RBM26Q5T8P6 1007 aaKnown RBP7.32□□□□□ -1.24
HMGB1P30-201ENST00000492455 EHBP1Q8NDI1 1231 aa7.32□□□□□ -1.24
HMGB1P30-201ENST00000492455 TSHZ2Q9NRE2 1034 aa7.32□□□□□ -1.24
HMGB1P30-201ENST00000492455 KDM4AO75164 1064 aa7.31□□□□□ -1.24
HMGB1P30-201ENST00000492455 VEGFBP49765 207 aa7.31□□□□□ -1.24
HMGB1P30-201ENST00000492455 SKOR1P84550 965 aa7.3□□□□□ -1.24
HMGB1P30-201ENST00000492455 USP46P62068 366 aa7.29□□□□□ -1.24
HMGB1P30-201ENST00000492455 TRIM46Q7Z4K8 759 aa7.29□□□□□ -1.24
HMGB1P30-201ENST00000492455 JUNDP17535 347 aa7.27□□□□□ -1.25
HMGB1P30-201ENST00000492455 LORP23490 312 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P30-201ENST00000492455 PHOX2BQ99453 314 aa7.27□□□□□ -1.25
HMGB1P30-201ENST00000492455 KDM2AQ9Y2K7 1162 aa7.27□□□□□ -1.25
HMGB1P30-201ENST00000492455 TESPA1A2RU30 521 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P30-201ENST00000492455 CD46P15529 392 aa7.26□□□□□ -1.25
HMGB1P30-201ENST00000492455 SCARF1Q14162 830 aa7.26□□□□□ -1.25
HMGB1P30-201ENST00000492455 SUZ12Q15022 739 aaKnown RBP7.26□□□□□ -1.25
HMGB1P30-201ENST00000492455 ERBB4Q15303 1308 aa7.26□□□□□ -1.25
HMGB1P30-201ENST00000492455 ZFP42Q96MM3 310 aa7.25□□□□□ -1.25
HMGB1P30-201ENST00000492455 NUDT12Q9BQG2 462 aa7.25□□□□□ -1.25
HMGB1P30-201ENST00000492455 PLEKHG3A1L390 1219 aa7.24□□□□□ -1.25
HMGB1P30-201ENST00000492455 GPR37O15354 613 aa7.24□□□□□ -1.25
HMGB1P30-201ENST00000492455 SIAH2O43255 324 aa7.24□□□□□ -1.25
HMGB1P30-201ENST00000492455 GPIHBP1Q8IV16 184 aa7.23□□□□□ -1.25
HMGB1P30-201ENST00000492455 HOXA2O43364 376 aa7.22□□□□□ -1.25
HMGB1P30-201ENST00000492455 VSIG10Q8N0Z9 540 aa7.22□□□□□ -1.25
HMGB1P30-201ENST00000492455 HLA-CQ95604 372 aa7.21□□□□□ -1.26
HMGB1P30-201ENST00000492455 MRPL14Q6P1L8 145 aaKnown RBP7.2□□□□□ -1.26
HMGB1P30-201ENST00000492455 RETREG3Q86VR2 466 aa7.2□□□□□ -1.26
HMGB1P30-201ENST00000492455 RNF225M0QZC1 329 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P30-201ENST00000492455 CCNYL3P0C7X3 344 aa7.19□□□□□ -1.26
HMGB1P30-201ENST00000492455 VSIG8P0DPA2 414 aa7.19□□□□□ -1.26
HMGB1P30-201ENST00000492455 MS4A1P11836 297 aa7.19□□□□□ -1.26
HMGB1P30-201ENST00000492455 SH3BP2P78314 561 aa7.19□□□□□ -1.26
HMGB1P30-201ENST00000492455 KCNMA1Q12791 1236 aa7.19□□□□□ -1.26
HMGB1P30-201ENST00000492455 NNTQ13423 1086 aa7.19□□□□□ -1.26
HMGB1P30-201ENST00000492455 KCTD17Q8N5Z5 321 aa7.19□□□□□ -1.26
HMGB1P30-201ENST00000492455 PURBQ96QR8 312 aaKnown RBP7.19□□□□□ -1.26
HMGB1P30-201ENST00000492455 ADH1CP00326 375 aa7.18□□□□□ -1.26
HMGB1P30-201ENST00000492455 PTCRAQ6ISU1 281 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P30-201ENST00000492455 NUTM1Q86Y26 1132 aa7.18□□□□□ -1.26
HMGB1P30-201ENST00000492455 TLL2Q9Y6L7 1015 aa7.18□□□□□ -1.26
HMGB1P30-201ENST00000492455 MAN1A2O60476 641 aa7.17□□□□□ -1.26
HMGB1P30-201ENST00000492455 WDR4P57081 412 aaKnown RBP7.17□□□□□ -1.26
HMGB1P30-201ENST00000492455 MDM2Q00987 491 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P30-201ENST00000492455 TMEM151AQ8N4L1 468 aa7.17□□□□□ -1.26
HMGB1P30-201ENST00000492455 SYMPKQ92797 1274 aaKnown RBP7.17□□□□□ -1.26
HMGB1P30-201ENST00000492455 C6orf229H3BNL8 230 aa7.16□□□□□ -1.26
HMGB1P30-201ENST00000492455 VARSP26640 1264 aaKnown RBP7.16□□□□□ -1.26
HMGB1P30-201ENST00000492455 GUCA2AQ02747 115 aa7.16□□□□□ -1.26
HMGB1P30-201ENST00000492455 MAP2K5Q13163 448 aa7.16□□□□□ -1.26
HMGB1P30-201ENST00000492455 UNC93B1Q9H1C4 597 aa7.16□□□□□ -1.26
HMGB1P30-201ENST00000492455 LINC01559Q495D7 138 aa7.15□□□□□ -1.26
HMGB1P30-201ENST00000492455 UPP2O95045 317 aa7.14□□□□□ -1.27
HMGB1P30-201ENST00000492455 GDF11O95390 407 aa7.14□□□□□ -1.27
HMGB1P30-201ENST00000492455 PTPRNQ16849 979 aa7.14□□□□□ -1.27
HMGB1P30-201ENST00000492455 MPNDQ8N594 471 aa7.14□□□□□ -1.27
HMGB1P30-201ENST00000492455 KRI1Q8N9T8 703 aaKnown RBP7.14□□□□□ -1.27
HMGB1P30-201ENST00000492455 SOBPA7XYQ1 873 aa7.13□□□□□ -1.27
HMGB1P30-201ENST00000492455 TIMP2P16035 220 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms