RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 TBX22Q9Y458 520 aa20.81■□□□□ 0.92
COPS7B-222ENST00000492423 TULP4Q9NRJ4 1543 aa20.8■□□□□ 0.92
COPS7B-222ENST00000492423 SLC26A8Q96RN1 970 aa20.8■□□□□ 0.92
COPS7B-222ENST00000492423 STK26Q9P289 416 aa20.8■□□□□ 0.92
COPS7B-222ENST00000492423 DIEXFQ68CQ4 756 aaKnown RBP20.78■□□□□ 0.92
COPS7B-222ENST00000492423 FAM135BQ49AJ0 1406 aa20.78■□□□□ 0.92
COPS7B-222ENST00000492423 NCKAP5LQ9HCH0 1330 aa20.78■□□□□ 0.92
COPS7B-222ENST00000492423 NWD1Q149M9 1564 aa20.77■□□□□ 0.92
COPS7B-222ENST00000492423 PIK3R4Q99570 1358 aa20.77■□□□□ 0.92
COPS7B-222ENST00000492423 PLEKHH1Q9ULM0 1364 aa20.76■□□□□ 0.91
COPS7B-222ENST00000492423 TMF1P82094 1093 aa20.76■□□□□ 0.91
COPS7B-222ENST00000492423 DDX10Q13206 875 aaKnown RBP20.76■□□□□ 0.91
COPS7B-222ENST00000492423 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.75■□□□□ 0.91
COPS7B-222ENST00000492423 HSPA2P54652 639 aa20.75■□□□□ 0.91
COPS7B-222ENST00000492423 FBXO41Q8TF61 875 aa20.75■□□□□ 0.91
COPS7B-222ENST00000492423 PTCH1Q13635 1447 aa20.75■□□□□ 0.91
COPS7B-222ENST00000492423 ADGRB2O60241 1585 aa20.74■□□□□ 0.91
COPS7B-222ENST00000492423 ROBO2Q9HCK4 1378 aa20.73■□□□□ 0.91
COPS7B-222ENST00000492423 NPM3O75607 178 aaKnown RBP20.73■□□□□ 0.91
COPS7B-222ENST00000492423 PRAM1Q96QH2 718 aa20.73■□□□□ 0.91
COPS7B-222ENST00000492423 SIRT1Q96EB6 747 aa20.72■□□□□ 0.91
COPS7B-222ENST00000492423 STRCP1A6NGW2 1772 aa20.71■□□□□ 0.91
COPS7B-222ENST00000492423 SLC24A1O60721 1099 aa20.69■□□□□ 0.9
COPS7B-222ENST00000492423 SAFB2Q14151 953 aaKnown RBP eCLIP20.69■□□□□ 0.9
COPS7B-222ENST00000492423 WAPLQ7Z5K2 1190 aa20.69■□□□□ 0.9
COPS7B-222ENST00000492423 POLR3GLQ9BT43 218 aa20.69■□□□□ 0.9
COPS7B-222ENST00000492423 POGKQ9P215 609 aa20.69■□□□□ 0.9
COPS7B-222ENST00000492423 NALCNQ8IZF0 1738 aa20.68■□□□□ 0.9
COPS7B-222ENST00000492423 AMOTL2Q9Y2J4 779 aa20.68■□□□□ 0.9
COPS7B-222ENST00000492423 MINK1Q8N4C8 1332 aaPredicted RBP20.66■□□□□ 0.9
COPS7B-222ENST00000492423 CDCA8Q53HL2 280 aa20.65■□□□□ 0.9
COPS7B-222ENST00000492423 EVC2Q86UK5 1308 aa20.64■□□□□ 0.89
COPS7B-222ENST00000492423 KCNA6P17658 529 aa20.63■□□□□ 0.89
COPS7B-222ENST00000492423 TOPAZ1Q8N9V7 1692 aa20.63■□□□□ 0.89
COPS7B-222ENST00000492423 NKTRP30414 1462 aaKnown RBP20.62■□□□□ 0.89
COPS7B-222ENST00000492423 PUS7Q96PZ0 661 aaKnown RBP20.61■□□□□ 0.89
COPS7B-222ENST00000492423 FMN2Q9NZ56 1722 aa20.61■□□□□ 0.89
COPS7B-222ENST00000492423 USP32Q8NFA0 1604 aa20.6■□□□□ 0.89
COPS7B-222ENST00000492423 RGPD8O14715 1765 aaPredicted RBP20.58■□□□□ 0.89
COPS7B-222ENST00000492423 CDC42BPGQ6DT37 1551 aa20.58■□□□□ 0.88
COPS7B-222ENST00000492423 XIRP1Q702N8 1843 aaKnown RBP20.57■□□□□ 0.88
COPS7B-222ENST00000492423 ITSN1Q15811 1721 aa20.57■□□□□ 0.88
COPS7B-222ENST00000492423 CABP2Q9NPB3 220 aa20.57■□□□□ 0.88
COPS7B-222ENST00000492423 ATAD2Q6PL18 1390 aa20.57■□□□□ 0.88
COPS7B-222ENST00000492423 ATP7BP35670 1465 aa20.56■□□□□ 0.88
COPS7B-222ENST00000492423 CDK19Q9BWU1 502 aa20.56■□□□□ 0.88
COPS7B-222ENST00000492423 AKAP12Q02952 1782 aa20.55■□□□□ 0.88
COPS7B-222ENST00000492423 WASLO00401 505 aaPredicted RBP20.55■□□□□ 0.88
COPS7B-222ENST00000492423 ADGRL3Q9HAR2 1447 aa20.54■□□□□ 0.88
COPS7B-222ENST00000492423 MIER1Q8N108 512 aa20.54■□□□□ 0.88
COPS7B-222ENST00000492423 SRPK2P78362 688 aaKnown RBP20.53■□□□□ 0.88
COPS7B-222ENST00000492423 NINLQ9Y2I6 1382 aa20.52■□□□□ 0.88
COPS7B-222ENST00000492423 PANK3Q9H999 370 aa20.52■□□□□ 0.88
COPS7B-222ENST00000492423 CD163L1Q9NR16 1453 aa20.51■□□□□ 0.87
COPS7B-222ENST00000492423 MON2Q7Z3U7 1717 aa20.51■□□□□ 0.87
COPS7B-222ENST00000492423 PER1O15534 1290 aaPredicted RBP20.51■□□□□ 0.87
COPS7B-222ENST00000492423 CERKQ8TCT0 537 aa20.51■□□□□ 0.87
COPS7B-222ENST00000492423 PRR36Q9H6K5 1346 aa20.5■□□□□ 0.87
COPS7B-222ENST00000492423 ANKRD36BQ8N2N9 1353 aa20.48■□□□□ 0.87
COPS7B-222ENST00000492423 SLC12A5Q9H2X9 1139 aa20.48■□□□□ 0.87
COPS7B-222ENST00000492423 KIF20BQ96Q89 1820 aa20.46■□□□□ 0.87
COPS7B-222ENST00000492423 PPIP5K1Q6PFW1 1433 aa20.46■□□□□ 0.87
COPS7B-222ENST00000492423 ANP32CO43423 234 aa20.46■□□□□ 0.87
COPS7B-222ENST00000492423 TMC1Q8TDI8 760 aa20.46■□□□□ 0.87
COPS7B-222ENST00000492423 ANKRD26Q9UPS8 1709 aa20.46■□□□□ 0.87
COPS7B-222ENST00000492423 A0A1W2PP64 1363 aa20.46■□□□□ 0.87
COPS7B-222ENST00000492423 ANKARQ7Z5J8 1434 aa20.45■□□□□ 0.86
COPS7B-222ENST00000492423 RBM33Q96EV2 1170 aaKnown RBP20.45■□□□□ 0.86
COPS7B-222ENST00000492423 NRKQ7Z2Y5 1582 aa20.45■□□□□ 0.86
COPS7B-222ENST00000492423 PROSER2Q86WR7 435 aaPredicted RBP20.44■□□□□ 0.86
COPS7B-222ENST00000492423 NUDT16Q96DE0 195 aaKnown RBP20.44■□□□□ 0.86
COPS7B-222ENST00000492423 NSD3Q9BZ95 1437 aa20.44■□□□□ 0.86
COPS7B-222ENST00000492423 NCOA3Q9Y6Q9 1424 aa20.44■□□□□ 0.86
COPS7B-222ENST00000492423 LRRC7Q96NW7 1537 aa20.43■□□□□ 0.86
COPS7B-222ENST00000492423 CARD14Q9BXL6 1004 aa20.43■□□□□ 0.86
COPS7B-222ENST00000492423 ZNF335Q9H4Z2 1342 aaPredicted RBP20.43■□□□□ 0.86
COPS7B-222ENST00000492423 TMEM94Q12767 1356 aa20.43■□□□□ 0.86
COPS7B-222ENST00000492423 CPSF1Q10570 1443 aaKnown RBP20.43■□□□□ 0.86
COPS7B-222ENST00000492423 PRKRIP1Q9H875 184 aaPredicted RBP20.42■□□□□ 0.86
COPS7B-222ENST00000492423 CABP1Q9NZU7 370 aa20.41■□□□□ 0.86
COPS7B-222ENST00000492423 NPC1L1Q9UHC9 1359 aa20.41■□□□□ 0.86
COPS7B-222ENST00000492423 AMER1Q5JTC6 1135 aaPredicted RBP20.4■□□□□ 0.86
COPS7B-222ENST00000492423 CCDC61Q9Y6R9 512 aa20.4■□□□□ 0.86
COPS7B-222ENST00000492423 DCCP43146 1447 aa20.39■□□□□ 0.85
COPS7B-222ENST00000492423 PARD3Q8TEW0 1356 aa20.39■□□□□ 0.85
COPS7B-222ENST00000492423 KTN1Q86UP2 1357 aaKnown RBP20.38■□□□□ 0.85
COPS7B-222ENST00000492423 NUTM2FA1L443 756 aa20.38■□□□□ 0.85
COPS7B-222ENST00000492423 KNSTRNQ9Y448 316 aa20.38■□□□□ 0.85
COPS7B-222ENST00000492423 LTBP4Q8N2S1 1624 aa20.37■□□□□ 0.85
COPS7B-222ENST00000492423 TERF2IPQ9NYB0 399 aa20.36■□□□□ 0.85
COPS7B-222ENST00000492423 KIF1AQ12756 1690 aa20.35■□□□□ 0.85
COPS7B-222ENST00000492423 PLEKHG3A1L390 1219 aa20.35■□□□□ 0.85
COPS7B-222ENST00000492423 HDGFL2Q7Z4V5 671 aaPredicted RBP20.35■□□□□ 0.85
COPS7B-222ENST00000492423 C14orf37Q86TY3 774 aa20.35■□□□□ 0.85
COPS7B-222ENST00000492423 MST1RQ04912 1400 aa20.34■□□□□ 0.85
COPS7B-222ENST00000492423 EDC4Q6P2E9 1401 aaKnown RBP20.34■□□□□ 0.85
COPS7B-222ENST00000492423 POLR3AO14802 1390 aaPredicted RBP20.34■□□□□ 0.85
COPS7B-222ENST00000492423 CCER2I3L3R5 266 aa20.33■□□□□ 0.85
COPS7B-222ENST00000492423 CC2D1BQ5T0F9 858 aaKnown RBP20.33■□□□□ 0.85
COPS7B-222ENST00000492423 C19orf44Q9H6X5 657 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms