RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ORAI2Q96SN7 254 aa12.45□□□□□ -0.42
SMARCB1-207ENST00000491967 MYOM2P54296 1465 aa12.45□□□□□ -0.42
SMARCB1-207ENST00000491967 ZNF772Q68DY9 489 aaPredicted RBP12.44□□□□□ -0.42
SMARCB1-207ENST00000491967 DDX17Q92841 729 aaKnown RBP12.44□□□□□ -0.42
SMARCB1-207ENST00000491967 YTHDC2Q9H6S0 1430 aaKnown RBP12.43□□□□□ -0.42
SMARCB1-207ENST00000491967 TMEM132EQ6IEE7 984 aa12.42□□□□□ -0.42
SMARCB1-207ENST00000491967 WAPLQ7Z5K2 1190 aa12.42□□□□□ -0.42
SMARCB1-207ENST00000491967 COL22A1Q8NFW1 1626 aaPredicted RBP12.41□□□□□ -0.42
SMARCB1-207ENST00000491967 PLEKHH1Q9ULM0 1364 aa12.41□□□□□ -0.42
SMARCB1-207ENST00000491967 PXDNQ92626 1479 aa12.4□□□□□ -0.42
SMARCB1-207ENST00000491967 CDK12Q9NYV4 1490 aaPredicted RBP12.4□□□□□ -0.42
SMARCB1-207ENST00000491967 MEX3CQ5U5Q3 659 aaKnown RBP12.4□□□□□ -0.42
SMARCB1-207ENST00000491967 STAC3Q96MF2 364 aa12.4□□□□□ -0.42
SMARCB1-207ENST00000491967 NUTM2BA6NNL0 878 aaPredicted RBP12.39□□□□□ -0.43
SMARCB1-207ENST00000491967 NUTM2EB1AL46 878 aaPredicted RBP12.39□□□□□ -0.43
SMARCB1-207ENST00000491967 CFAP70Q5T0N1 1121 aa12.39□□□□□ -0.43
SMARCB1-207ENST00000491967 NUTM2AQ8IVF1 878 aaPredicted RBP12.39□□□□□ -0.43
SMARCB1-207ENST00000491967 STK26Q9P289 416 aa12.39□□□□□ -0.43
SMARCB1-207ENST00000491967 FMN2Q9NZ56 1722 aa12.39□□□□□ -0.43
SMARCB1-207ENST00000491967 NPHP3Q7Z494 1330 aa12.38□□□□□ -0.43
SMARCB1-207ENST00000491967 ADGRB1O14514 1584 aa12.38□□□□□ -0.43
SMARCB1-207ENST00000491967 AFF2P51816 1311 aa12.37□□□□□ -0.43
SMARCB1-207ENST00000491967 DLC1Q96QB1 1528 aa12.37□□□□□ -0.43
SMARCB1-207ENST00000491967 RXRBP28702 533 aa12.37□□□□□ -0.43
SMARCB1-207ENST00000491967 ESCO1Q5FWF5 840 aa12.37□□□□□ -0.43
SMARCB1-207ENST00000491967 DHX57Q6P158 1386 aaKnown RBP12.37□□□□□ -0.43
SMARCB1-207ENST00000491967 FOXO3O43524 673 aa12.36□□□□□ -0.43
SMARCB1-207ENST00000491967 FNBP4Q8N3X1 1017 aaPredicted RBP12.36□□□□□ -0.43
SMARCB1-207ENST00000491967 RGPD8O14715 1765 aaPredicted RBP12.35□□□□□ -0.43
SMARCB1-207ENST00000491967 KIF1AQ12756 1690 aa12.35□□□□□ -0.43
SMARCB1-207ENST00000491967 RBM6P78332 1123 aaKnown RBP12.33□□□□□ -0.44
SMARCB1-207ENST00000491967 C8orf37Q96NL8 207 aa12.33□□□□□ -0.44
SMARCB1-207ENST00000491967 QTRT2Q9H974 415 aaKnown RBP12.33□□□□□ -0.44
SMARCB1-207ENST00000491967 ADGRB2O60241 1585 aa12.33□□□□□ -0.44
SMARCB1-207ENST00000491967 MARF1Q9Y4F3 1742 aaKnown RBP12.33□□□□□ -0.44
SMARCB1-207ENST00000491967 DCAF11Q8TEB1 546 aa12.32□□□□□ -0.44
SMARCB1-207ENST00000491967 UPF1Q92900 1129 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMARCB1-207ENST00000491967 PRAM1Q96QH2 718 aa12.32□□□□□ -0.44
SMARCB1-207ENST00000491967 SPATA31A3Q5VYP0 1347 aa12.32□□□□□ -0.44
SMARCB1-207ENST00000491967 ANKARQ7Z5J8 1434 aa12.31□□□□□ -0.44
SMARCB1-207ENST00000491967 ADAMTS2O95450 1211 aa12.31□□□□□ -0.44
SMARCB1-207ENST00000491967 NGLY1Q96IV0 654 aa12.31□□□□□ -0.44
SMARCB1-207ENST00000491967 USP32Q8NFA0 1604 aa12.3□□□□□ -0.44
SMARCB1-207ENST00000491967 BCL9LQ86UU0 1499 aa12.3□□□□□ -0.44
SMARCB1-207ENST00000491967 NUTM2FA1L443 756 aa12.3□□□□□ -0.44
SMARCB1-207ENST00000491967 RGS12O14924 1447 aa12.29□□□□□ -0.44
SMARCB1-207ENST00000491967 ATRNO75882 1429 aa12.29□□□□□ -0.44
SMARCB1-207ENST00000491967 XPCQ01831 940 aaPredicted RBP12.29□□□□□ -0.44
SMARCB1-207ENST00000491967 KRT28Q7Z3Y7 464 aa12.29□□□□□ -0.44
SMARCB1-207ENST00000491967 PHF8Q9UPP1 1060 aa12.29□□□□□ -0.44
SMARCB1-207ENST00000491967 SBNO1A3KN83 1393 aa12.29□□□□□ -0.44
SMARCB1-207ENST00000491967 USP21Q9UK80 565 aa12.28□□□□□ -0.44
SMARCB1-207ENST00000491967 TRPC5Q9UL62 973 aaPredicted RBP12.28□□□□□ -0.44
SMARCB1-207ENST00000491967 POGKQ9P215 609 aa12.27□□□□□ -0.45
SMARCB1-207ENST00000491967 KDM2AQ9Y2K7 1162 aa12.27□□□□□ -0.45
SMARCB1-207ENST00000491967 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.27□□□□□ -0.45
SMARCB1-207ENST00000491967 KIAA1210Q9ULL0 1709 aa12.27□□□□□ -0.45
SMARCB1-207ENST00000491967 SLIT2O94813 1529 aa12.27□□□□□ -0.45
SMARCB1-207ENST00000491967 PSME1Q06323 249 aa12.26□□□□□ -0.45
SMARCB1-207ENST00000491967 TRAK1Q9UPV9 953 aa12.26□□□□□ -0.45
SMARCB1-207ENST00000491967 TNS3Q68CZ2 1445 aa12.26□□□□□ -0.45
SMARCB1-207ENST00000491967 ARHGEF28Q8N1W1 1705 aaKnown RBP12.25□□□□□ -0.45
SMARCB1-207ENST00000491967 TRPM3Q9HCF6 1732 aaPredicted RBP12.25□□□□□ -0.45
SMARCB1-207ENST00000491967 WASLO00401 505 aaPredicted RBP12.25□□□□□ -0.45
SMARCB1-207ENST00000491967 SAFB2Q14151 953 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMARCB1-207ENST00000491967 PRR36Q9H6K5 1346 aa12.25□□□□□ -0.45
SMARCB1-207ENST00000491967 EIF3AQ14152 1382 aaKnown RBP12.24□□□□□ -0.45
SMARCB1-207ENST00000491967 TULP4Q9NRJ4 1543 aa12.24□□□□□ -0.45
SMARCB1-207ENST00000491967 ABCA3Q99758 1704 aa12.23□□□□□ -0.45
SMARCB1-207ENST00000491967 ALS2Q96Q42 1657 aa12.23□□□□□ -0.45
SMARCB1-207ENST00000491967 ARHGEF10O15013 1369 aa12.23□□□□□ -0.45
SMARCB1-207ENST00000491967 UNC5CLQ8IV45 518 aa12.23□□□□□ -0.45
SMARCB1-207ENST00000491967 MINK1Q8N4C8 1332 aaPredicted RBP12.22□□□□□ -0.45
SMARCB1-207ENST00000491967 GJD4Q96KN9 370 aaPredicted RBP12.22□□□□□ -0.45
SMARCB1-207ENST00000491967 HIRIP3Q9BW71 556 aaPredicted RBP12.22□□□□□ -0.45
SMARCB1-207ENST00000491967 NWD2Q9ULI1 1742 aa12.22□□□□□ -0.45
SMARCB1-207ENST00000491967 ONECUT3O60422 494 aaPredicted RBP12.21□□□□□ -0.45
SMARCB1-207ENST00000491967 PMFBP1Q8TBY8 1022 aa12.2□□□□□ -0.46
SMARCB1-207ENST00000491967 CABLES1Q8TDN4 633 aa12.2□□□□□ -0.46
SMARCB1-207ENST00000491967 GLI3P10071 1580 aa12.2□□□□□ -0.46
SMARCB1-207ENST00000491967 ATP7BP35670 1465 aa12.2□□□□□ -0.46
SMARCB1-207ENST00000491967 FAM83GA6ND36 823 aa12.19□□□□□ -0.46
SMARCB1-207ENST00000491967 NBPF1Q3BBV0 1214 aa12.19□□□□□ -0.46
SMARCB1-207ENST00000491967 CRYBG1Q9Y4K1 1723 aa12.19□□□□□ -0.46
SMARCB1-207ENST00000491967 RALGAPBQ86X10 1494 aa12.19□□□□□ -0.46
SMARCB1-207ENST00000491967 POLR3AO14802 1390 aaPredicted RBP12.18□□□□□ -0.46
SMARCB1-207ENST00000491967 GPRASP1Q5JY77 1395 aa12.18□□□□□ -0.46
SMARCB1-207ENST00000491967 ATAD2Q6PL18 1390 aa12.18□□□□□ -0.46
SMARCB1-207ENST00000491967 ITSN1Q15811 1721 aa12.18□□□□□ -0.46
SMARCB1-207ENST00000491967 VPS72Q15906 364 aa12.18□□□□□ -0.46
SMARCB1-207ENST00000491967 NUDT16Q96DE0 195 aaKnown RBP12.18□□□□□ -0.46
SMARCB1-207ENST00000491967 PLCH1Q4KWH8 1693 aa12.18□□□□□ -0.46
SMARCB1-207ENST00000491967 TOPAZ1Q8N9V7 1692 aa12.17□□□□□ -0.46
SMARCB1-207ENST00000491967 PLEKHG3A1L390 1219 aa12.17□□□□□ -0.46
SMARCB1-207ENST00000491967 CDK19Q9BWU1 502 aa12.17□□□□□ -0.46
SMARCB1-207ENST00000491967 EP400Q96L91 3159 aa12.16□□□□□ -0.46
SMARCB1-207ENST00000491967 CCDC125Q86Z20 511 aa12.16□□□□□ -0.46
SMARCB1-207ENST00000491967 L3MBTL2Q969R5 705 aa12.16□□□□□ -0.46
SMARCB1-207ENST00000491967 BRWD3Q6RI45 1802 aa12.16□□□□□ -0.46
SMARCB1-207ENST00000491967 NRAPQ86VF7 1730 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms