RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 TRAK1Q9UPV9 953 aa21.9■■□□□ 1.1
SS18L1-204ENST00000491916 PRAM1Q96QH2 718 aa21.89■■□□□ 1.09
SS18L1-204ENST00000491916 TRPM1Q7Z4N2 1603 aa21.88■■□□□ 1.09
SS18L1-204ENST00000491916 CLSPNQ9HAW4 1339 aa21.88■■□□□ 1.09
SS18L1-204ENST00000491916 CDC42BPGQ6DT37 1551 aa21.87■■□□□ 1.09
SS18L1-204ENST00000491916 ARHGEF28Q8N1W1 1705 aaKnown RBP21.86■■□□□ 1.09
SS18L1-204ENST00000491916 C1orf167Q5SNV9 1468 aa21.86■■□□□ 1.09
SS18L1-204ENST00000491916 BRINP3Q76B58 766 aa21.86■■□□□ 1.09
SS18L1-204ENST00000491916 TONSLQ96HA7 1378 aa21.86■■□□□ 1.09
SS18L1-204ENST00000491916 SAFB2Q14151 953 aaKnown RBP eCLIP21.83■■□□□ 1.09
SS18L1-204ENST00000491916 POGKQ9P215 609 aa21.81■■□□□ 1.08
SS18L1-204ENST00000491916 GPRASP1Q5JY77 1395 aa21.81■■□□□ 1.08
SS18L1-204ENST00000491916 ADGRB2O60241 1585 aa21.81■■□□□ 1.08
SS18L1-204ENST00000491916 FMN2Q9NZ56 1722 aa21.8■■□□□ 1.08
SS18L1-204ENST00000491916 ORAI2Q96SN7 254 aa21.8■■□□□ 1.08
SS18L1-204ENST00000491916 AHDC1Q5TGY3 1603 aaPredicted RBP21.8■■□□□ 1.08
SS18L1-204ENST00000491916 CCER1Q8TC90 406 aaPredicted RBP21.77■■□□□ 1.08
SS18L1-204ENST00000491916 MINK1Q8N4C8 1332 aaPredicted RBP21.77■■□□□ 1.07
SS18L1-204ENST00000491916 RALGAPBQ86X10 1494 aa21.77■■□□□ 1.07
SS18L1-204ENST00000491916 COL16A1Q07092 1604 aaPredicted RBP21.77■■□□□ 1.07
SS18L1-204ENST00000491916 NHSL1Q5SYE7 1610 aa21.77■■□□□ 1.07
SS18L1-204ENST00000491916 ROCK2O75116 1388 aaKnown RBP21.76■■□□□ 1.07
SS18L1-204ENST00000491916 PHLPP1O60346 1717 aa21.76■■□□□ 1.07
SS18L1-204ENST00000491916 HIRIP3Q9BW71 556 aaPredicted RBP21.76■■□□□ 1.07
SS18L1-204ENST00000491916 NUTM2FA1L443 756 aa21.75■■□□□ 1.07
SS18L1-204ENST00000491916 DDX17Q92841 729 aaKnown RBP21.75■■□□□ 1.07
SS18L1-204ENST00000491916 USP32Q8NFA0 1604 aa21.74■■□□□ 1.07
SS18L1-204ENST00000491916 TIMELESSQ9UNS1 1208 aa21.74■■□□□ 1.07
SS18L1-204ENST00000491916 RGPD8O14715 1765 aaPredicted RBP21.74■■□□□ 1.07
SS18L1-204ENST00000491916 WASLO00401 505 aaPredicted RBP21.71■■□□□ 1.07
SS18L1-204ENST00000491916 PRR36Q9H6K5 1346 aa21.71■■□□□ 1.07
SS18L1-204ENST00000491916 ESCO1Q5FWF5 840 aa21.7■■□□□ 1.06
SS18L1-204ENST00000491916 CENPJQ9HC77 1338 aaPredicted RBP21.7■■□□□ 1.06
SS18L1-204ENST00000491916 ANKARQ7Z5J8 1434 aa21.69■■□□□ 1.06
SS18L1-204ENST00000491916 TULP4Q9NRJ4 1543 aa21.68■■□□□ 1.06
SS18L1-204ENST00000491916 QRICH2Q9H0J4 1663 aa21.67■■□□□ 1.06
SS18L1-204ENST00000491916 SOS2Q07890 1332 aaPredicted RBP21.67■■□□□ 1.06
SS18L1-204ENST00000491916 CARD11Q9BXL7 1154 aa21.67■■□□□ 1.06
SS18L1-204ENST00000491916 PXDNQ92626 1479 aa21.65■■□□□ 1.06
SS18L1-204ENST00000491916 CDK19Q9BWU1 502 aa21.65■■□□□ 1.06
SS18L1-204ENST00000491916 ATP7BP35670 1465 aa21.64■■□□□ 1.06
SS18L1-204ENST00000491916 FOXO3O43524 673 aa21.64■■□□□ 1.05
SS18L1-204ENST00000491916 JCADQ9P266 1359 aa21.63■■□□□ 1.05
SS18L1-204ENST00000491916 PHF8Q9UPP1 1060 aa21.63■■□□□ 1.05
SS18L1-204ENST00000491916 KIF1AQ12756 1690 aa21.63■■□□□ 1.05
SS18L1-204ENST00000491916 MED1Q15648 1581 aaPredicted RBP21.61■■□□□ 1.05
SS18L1-204ENST00000491916 NPHP3Q7Z494 1330 aa21.61■■□□□ 1.05
SS18L1-204ENST00000491916 SHPRHQ149N8 1683 aa21.61■■□□□ 1.05
SS18L1-204ENST00000491916 NUDT16Q96DE0 195 aaKnown RBP21.61■■□□□ 1.05
SS18L1-204ENST00000491916 EIF3AQ14152 1382 aaKnown RBP21.61■■□□□ 1.05
SS18L1-204ENST00000491916 LRRC59Q96AG4 307 aaKnown RBP21.6■■□□□ 1.05
SS18L1-204ENST00000491916 XPCQ01831 940 aaPredicted RBP21.59■■□□□ 1.05
SS18L1-204ENST00000491916 PMFBP1Q8TBY8 1022 aa21.59■■□□□ 1.05
SS18L1-204ENST00000491916 TOPAZ1Q8N9V7 1692 aa21.59■■□□□ 1.05
SS18L1-204ENST00000491916 SBNO2Q9Y2G9 1366 aa21.59■■□□□ 1.05
SS18L1-204ENST00000491916 PNPLA6Q8IY17 1366 aa21.58■■□□□ 1.04
SS18L1-204ENST00000491916 TESK2Q96S53 571 aa21.56■■□□□ 1.04
SS18L1-204ENST00000491916 CABP2Q9NPB3 220 aa21.56■■□□□ 1.04
SS18L1-204ENST00000491916 LRP6O75581 1613 aa21.55■■□□□ 1.04
SS18L1-204ENST00000491916 KRT28Q7Z3Y7 464 aa21.55■■□□□ 1.04
SS18L1-204ENST00000491916 ST20-MTHFSA0A0A6YYL1 179 aa21.54■■□□□ 1.04
SS18L1-204ENST00000491916 PLEKHG3A1L390 1219 aa21.54■■□□□ 1.04
SS18L1-204ENST00000491916 CCDC61Q9Y6R9 512 aa21.54■■□□□ 1.04
SS18L1-204ENST00000491916 ITSN1Q15811 1721 aa21.54■■□□□ 1.04
SS18L1-204ENST00000491916 SPATA31A6Q5VVP1 1343 aa21.54■■□□□ 1.04
SS18L1-204ENST00000491916 SPATA31A3Q5VYP0 1347 aa21.53■■□□□ 1.04
SS18L1-204ENST00000491916 EVC2Q86UK5 1308 aa21.53■■□□□ 1.04
SS18L1-204ENST00000491916 SRPK2P78362 688 aaKnown RBP21.52■■□□□ 1.04
SS18L1-204ENST00000491916 TRPM3Q9HCF6 1732 aaPredicted RBP21.52■■□□□ 1.03
SS18L1-204ENST00000491916 COL22A1Q8NFW1 1626 aaPredicted RBP21.51■■□□□ 1.03
SS18L1-204ENST00000491916 POLR3AO14802 1390 aaPredicted RBP21.51■■□□□ 1.03
SS18L1-204ENST00000491916 SBNO1A3KN83 1393 aa21.5■■□□□ 1.03
SS18L1-204ENST00000491916 USP47Q96K76 1375 aa21.5■■□□□ 1.03
SS18L1-204ENST00000491916 PSME1Q06323 249 aa21.49■■□□□ 1.03
SS18L1-204ENST00000491916 RGS17Q9UGC6 210 aaPredicted RBP21.49■■□□□ 1.03
SS18L1-204ENST00000491916 ACEP12821 1306 aa21.49■■□□□ 1.03
SS18L1-204ENST00000491916 DISP3Q9P2K9 1392 aa21.48■■□□□ 1.03
SS18L1-204ENST00000491916 PPIP5K1Q6PFW1 1433 aa21.48■■□□□ 1.03
SS18L1-204ENST00000491916 NGDNQ8NEJ9 315 aaKnown RBP21.47■■□□□ 1.03
SS18L1-204ENST00000491916 CABP1Q9NZU7 370 aa21.47■■□□□ 1.03
SS18L1-204ENST00000491916 TNS3Q68CZ2 1445 aa21.46■■□□□ 1.03
SS18L1-204ENST00000491916 ALS2Q96Q42 1657 aa21.46■■□□□ 1.03
SS18L1-204ENST00000491916 NUTM2BA6NNL0 878 aaPredicted RBP21.44■■□□□ 1.02
SS18L1-204ENST00000491916 NUTM2EB1AL46 878 aaPredicted RBP21.44■■□□□ 1.02
SS18L1-204ENST00000491916 NUTM2AQ8IVF1 878 aaPredicted RBP21.44■■□□□ 1.02
SS18L1-204ENST00000491916 ATAD2Q6PL18 1390 aa21.42■■□□□ 1.02
SS18L1-204ENST00000491916 PUS7Q96PZ0 661 aaKnown RBP21.42■■□□□ 1.02
SS18L1-204ENST00000491916 SSH2Q76I76 1423 aa21.4■■□□□ 1.02
SS18L1-204ENST00000491916 CD163L1Q9NR16 1453 aa21.39■■□□□ 1.02
SS18L1-204ENST00000491916 CPSF1Q10570 1443 aaKnown RBP21.39■■□□□ 1.02
SS18L1-204ENST00000491916 ARHGEF10O15013 1369 aa21.39■■□□□ 1.02
SS18L1-204ENST00000491916 USP6P35125 1406 aa21.38■■□□□ 1.01
SS18L1-204ENST00000491916 ILDR2Q71H61 639 aa21.37■■□□□ 1.01
SS18L1-204ENST00000491916 CABLES1Q8TDN4 633 aa21.37■■□□□ 1.01
SS18L1-204ENST00000491916 AKAP12Q02952 1782 aa21.37■■□□□ 1.01
SS18L1-204ENST00000491916 ABCA3Q99758 1704 aa21.37■■□□□ 1.01
SS18L1-204ENST00000491916 CRYBG1Q9Y4K1 1723 aa21.37■■□□□ 1.01
SS18L1-204ENST00000491916 ADAMTS2O95450 1211 aa21.36■■□□□ 1.01
SS18L1-204ENST00000491916 SLC12A5Q9H2X9 1139 aa21.36■■□□□ 1.01
SS18L1-204ENST00000491916 SLC24A1O60721 1099 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms