RNA–Protein interactions for RNA: ENST00000491857.1

PSMD4-212, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 461 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-212ENST00000491857 TRPC5Q9UL62 973 aaPredicted RBP25.52■■□□□ 1.68
PSMD4-212ENST00000491857 ATAD2Q6PL18 1390 aa25.51■■□□□ 1.67
PSMD4-212ENST00000491857 NPHP3Q7Z494 1330 aa25.49■■□□□ 1.67
PSMD4-212ENST00000491857 FNBP4Q8N3X1 1017 aaPredicted RBP25.48■■□□□ 1.67
PSMD4-212ENST00000491857 MARF1Q9Y4F3 1742 aaKnown RBP25.46■■□□□ 1.67
PSMD4-212ENST00000491857 ESCO1Q5FWF5 840 aa25.46■■□□□ 1.67
PSMD4-212ENST00000491857 MYOM2P54296 1465 aa25.45■■□□□ 1.66
PSMD4-212ENST00000491857 ATRNO75882 1429 aa25.45■■□□□ 1.66
PSMD4-212ENST00000491857 PXDNQ92626 1479 aa25.43■■□□□ 1.66
PSMD4-212ENST00000491857 LRPPRCP42704 1394 aaKnown RBP25.43■■□□□ 1.66
PSMD4-212ENST00000491857 CCDC144AA2RUR9 1427 aa25.42■■□□□ 1.66
PSMD4-212ENST00000491857 TECPR2O15040 1411 aa25.41■■□□□ 1.66
PSMD4-212ENST00000491857 FOXD1Q16676 465 aa25.41■■□□□ 1.66
PSMD4-212ENST00000491857 KNDC1Q76NI1 1749 aa25.4■■□□□ 1.66
PSMD4-212ENST00000491857 IFT172Q9UG01 1749 aa25.4■■□□□ 1.66
PSMD4-212ENST00000491857 ANKRD30BQ9BXX2 1392 aa25.39■■□□□ 1.65
PSMD4-212ENST00000491857 ADGRF5Q8IZF2 1346 aa25.38■■□□□ 1.65
PSMD4-212ENST00000491857 FOXO3O43524 673 aa25.38■■□□□ 1.65
PSMD4-212ENST00000491857 BCL9LQ86UU0 1499 aa25.36■■□□□ 1.65
PSMD4-212ENST00000491857 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.36■■□□□ 1.65
PSMD4-212ENST00000491857 KIF1AQ12756 1690 aa25.36■■□□□ 1.65
PSMD4-212ENST00000491857 ABCC11Q96J66 1382 aa25.35■■□□□ 1.65
PSMD4-212ENST00000491857 XPCQ01831 940 aaPredicted RBP25.35■■□□□ 1.65
PSMD4-212ENST00000491857 STK26Q9P289 416 aa25.35■■□□□ 1.65
PSMD4-212ENST00000491857 SPATA31E1Q6ZUB1 1445 aa25.35■■□□□ 1.65
PSMD4-212ENST00000491857 FMN2Q9NZ56 1722 aa25.34■■□□□ 1.65
PSMD4-212ENST00000491857 RGL3Q3MIN7 710 aa25.34■■□□□ 1.65
PSMD4-212ENST00000491857 WAPLQ7Z5K2 1190 aa25.33■■□□□ 1.65
PSMD4-212ENST00000491857 NUTM2FA1L443 756 aa25.32■■□□□ 1.64
PSMD4-212ENST00000491857 CCDC125Q86Z20 511 aa25.32■■□□□ 1.64
PSMD4-212ENST00000491857 PIK3C2GO75747 1445 aa25.31■■□□□ 1.64
PSMD4-212ENST00000491857 EP400Q96L91 3159 aa25.3■■□□□ 1.64
PSMD4-212ENST00000491857 GJD4Q96KN9 370 aaPredicted RBP25.3■■□□□ 1.64
PSMD4-212ENST00000491857 ZRANB1Q9UGI0 708 aa25.29■■□□□ 1.64
PSMD4-212ENST00000491857 YTHDC2Q9H6S0 1430 aaKnown RBP25.29■■□□□ 1.64
PSMD4-212ENST00000491857 TMEM132EQ6IEE7 984 aa25.28■■□□□ 1.64
PSMD4-212ENST00000491857 PLEKHH1Q9ULM0 1364 aa25.28■■□□□ 1.64
PSMD4-212ENST00000491857 SPATA31A3Q5VYP0 1347 aa25.27■■□□□ 1.64
PSMD4-212ENST00000491857 USP32Q8NFA0 1604 aa25.26■■□□□ 1.63
PSMD4-212ENST00000491857 UNC5CLQ8IV45 518 aa25.26■■□□□ 1.63
PSMD4-212ENST00000491857 MPHOSPH9Q99550 1183 aa25.26■■□□□ 1.63
PSMD4-212ENST00000491857 SLIT2O94813 1529 aa25.26■■□□□ 1.63
PSMD4-212ENST00000491857 SRCAPQ6ZRS2 3230 aa25.25■■□□□ 1.63
PSMD4-212ENST00000491857 SIRT1Q96EB6 747 aa25.24■■□□□ 1.63
PSMD4-212ENST00000491857 RGPD8O14715 1765 aaPredicted RBP25.23■■□□□ 1.63
PSMD4-212ENST00000491857 GLI3P10071 1580 aa25.23■■□□□ 1.63
PSMD4-212ENST00000491857 RALGAPBQ86X10 1494 aa25.23■■□□□ 1.63
PSMD4-212ENST00000491857 KRT28Q7Z3Y7 464 aa25.22■■□□□ 1.63
PSMD4-212ENST00000491857 TNS3Q68CZ2 1445 aa25.2■■□□□ 1.63
PSMD4-212ENST00000491857 HAP1P54257 671 aaPredicted RBP25.2■■□□□ 1.62
PSMD4-212ENST00000491857 PSME1Q06323 249 aa25.2■■□□□ 1.62
PSMD4-212ENST00000491857 ACIN1Q9UKV3 1341 aaKnown RBP25.19■■□□□ 1.62
PSMD4-212ENST00000491857 DHX57Q6P158 1386 aaKnown RBP25.18■■□□□ 1.62
PSMD4-212ENST00000491857 NWD2Q9ULI1 1742 aa25.18■■□□□ 1.62
PSMD4-212ENST00000491857 C14orf93Q9H972 538 aaKnown RBP25.18■■□□□ 1.62
PSMD4-212ENST00000491857 PHF8Q9UPP1 1060 aa25.18■■□□□ 1.62
PSMD4-212ENST00000491857 BRWD3Q6RI45 1802 aa25.18■■□□□ 1.62
PSMD4-212ENST00000491857 BLMP54132 1417 aaPredicted RBP25.18■■□□□ 1.62
PSMD4-212ENST00000491857 PLCH1Q4KWH8 1693 aa25.17■■□□□ 1.62
PSMD4-212ENST00000491857 NRXN1Q9ULB1 1477 aa25.16■■□□□ 1.62
PSMD4-212ENST00000491857 ABCA3Q99758 1704 aa25.15■■□□□ 1.62
PSMD4-212ENST00000491857 SBNO1A3KN83 1393 aa25.15■■□□□ 1.62
PSMD4-212ENST00000491857 ARHGEF10O15013 1369 aa25.14■■□□□ 1.61
PSMD4-212ENST00000491857 VPS72Q15906 364 aa25.13■■□□□ 1.61
PSMD4-212ENST00000491857 CFAP70Q5T0N1 1121 aa25.12■■□□□ 1.61
PSMD4-212ENST00000491857 SF3B2Q13435 895 aaKnown RBP25.11■■□□□ 1.61
PSMD4-212ENST00000491857 DLC1Q96QB1 1528 aa25.11■■□□□ 1.61
PSMD4-212ENST00000491857 LMOD2Q6P5Q4 547 aa25.1■■□□□ 1.61
PSMD4-212ENST00000491857 SEPT12Q8IYM1 358 aa25.1■■□□□ 1.61
PSMD4-212ENST00000491857 CABLES1Q8TDN4 633 aa25.1■■□□□ 1.61
PSMD4-212ENST00000491857 PRAM1Q96QH2 718 aa25.1■■□□□ 1.61
PSMD4-212ENST00000491857 ANKARQ7Z5J8 1434 aa25.1■■□□□ 1.61
PSMD4-212ENST00000491857 CCDC9Q9Y3X0 531 aaKnown RBP25.09■■□□□ 1.61
PSMD4-212ENST00000491857 ADGRB2O60241 1585 aa25.09■■□□□ 1.61
PSMD4-212ENST00000491857 SAFB2Q14151 953 aaKnown RBP eCLIP25.08■■□□□ 1.61
PSMD4-212ENST00000491857 POGKQ9P215 609 aa25.07■■□□□ 1.6
PSMD4-212ENST00000491857 PLEKHG5O94827 1062 aa25.06■■□□□ 1.6
PSMD4-212ENST00000491857 ONECUT3O60422 494 aaPredicted RBP25.05■■□□□ 1.6
PSMD4-212ENST00000491857 KRT27Q7Z3Y8 459 aa25.04■■□□□ 1.6
PSMD4-212ENST00000491857 DEFB132Q7Z7B7 95 aa25.03■■□□□ 1.6
PSMD4-212ENST00000491857 PMFBP1Q8TBY8 1022 aa25.03■■□□□ 1.6
PSMD4-212ENST00000491857 EIF3AQ14152 1382 aaKnown RBP25.03■■□□□ 1.6
PSMD4-212ENST00000491857 NRAPQ86VF7 1730 aa25.03■■□□□ 1.6
PSMD4-212ENST00000491857 TRPM3Q9HCF6 1732 aaPredicted RBP25.03■■□□□ 1.6
PSMD4-212ENST00000491857 ADGRB1O14514 1584 aa25.01■■□□□ 1.59
PSMD4-212ENST00000491857 ALS2Q96Q42 1657 aa25.01■■□□□ 1.59
PSMD4-212ENST00000491857 FAM83GA6ND36 823 aa25■■□□□ 1.59
PSMD4-212ENST00000491857 GPRASP1Q5JY77 1395 aa25■■□□□ 1.59
PSMD4-212ENST00000491857 COL14A1Q05707 1796 aaKnown RBP25■■□□□ 1.59
PSMD4-212ENST00000491857 A0A0G2JS52 829 aa24.99■■□□□ 1.59
PSMD4-212ENST00000491857 MYT1Q01538 1121 aa24.99■■□□□ 1.59
PSMD4-212ENST00000491857 TULP4Q9NRJ4 1543 aa24.97■■□□□ 1.59
PSMD4-212ENST00000491857 BTG4Q9NY30 223 aa24.96■■□□□ 1.59
PSMD4-212ENST00000491857 LRP5O75197 1615 aa24.96■■□□□ 1.59
PSMD4-212ENST00000491857 BAG6P46379 1132 aa24.95■■□□□ 1.58
PSMD4-212ENST00000491857 HIRIP3Q9BW71 556 aaPredicted RBP24.95■■□□□ 1.58
PSMD4-212ENST00000491857 TRAK1Q9UPV9 953 aa24.95■■□□□ 1.58
PSMD4-212ENST00000491857 FAM98CQ17RN3 349 aaKnown RBP24.94■■□□□ 1.58
PSMD4-212ENST00000491857 MINK1Q8N4C8 1332 aaPredicted RBP24.93■■□□□ 1.58
PSMD4-212ENST00000491857 RGPD1P0DJD0 1748 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms