RNA–Protein interactions for RNA: ENST00000491824.1

HCLS1-210, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-210ENST00000491824 TONSLQ96HA7 1378 aa23.71■■□□□ 1.39
HCLS1-210ENST00000491824 L3MBTL2Q969R5 705 aa23.71■■□□□ 1.39
HCLS1-210ENST00000491824 ADGRB1O14514 1584 aa23.7■■□□□ 1.38
HCLS1-210ENST00000491824 PRAM1Q96QH2 718 aa23.7■■□□□ 1.38
HCLS1-210ENST00000491824 TRAK1Q9UPV9 953 aa23.7■■□□□ 1.38
HCLS1-210ENST00000491824 KIAA1210Q9ULL0 1709 aa23.69■■□□□ 1.38
HCLS1-210ENST00000491824 PHLPP1O60346 1717 aa23.68■■□□□ 1.38
HCLS1-210ENST00000491824 BRINP3Q76B58 766 aa23.68■■□□□ 1.38
HCLS1-210ENST00000491824 C1orf167Q5SNV9 1468 aa23.67■■□□□ 1.38
HCLS1-210ENST00000491824 PLEKHH1Q9ULM0 1364 aa23.66■■□□□ 1.38
HCLS1-210ENST00000491824 SAFB2Q14151 953 aaKnown RBP eCLIP23.66■■□□□ 1.38
HCLS1-210ENST00000491824 AHDC1Q5TGY3 1603 aaPredicted RBP23.65■■□□□ 1.38
HCLS1-210ENST00000491824 EIF3AQ14152 1382 aaKnown RBP23.63■■□□□ 1.37
HCLS1-210ENST00000491824 JCADQ9P266 1359 aa23.61■■□□□ 1.37
HCLS1-210ENST00000491824 ESCO1Q5FWF5 840 aa23.6■■□□□ 1.37
HCLS1-210ENST00000491824 CCER1Q8TC90 406 aaPredicted RBP23.59■■□□□ 1.37
HCLS1-210ENST00000491824 ROCK2O75116 1388 aaKnown RBP23.58■■□□□ 1.37
HCLS1-210ENST00000491824 PHF23Q9BUL5 403 aaPredicted RBP23.58■■□□□ 1.37
HCLS1-210ENST00000491824 COL16A1Q07092 1604 aaPredicted RBP23.58■■□□□ 1.36
HCLS1-210ENST00000491824 NUTM2FA1L443 756 aa23.57■■□□□ 1.36
HCLS1-210ENST00000491824 MINK1Q8N4C8 1332 aaPredicted RBP23.57■■□□□ 1.36
HCLS1-210ENST00000491824 MED1Q15648 1581 aaPredicted RBP23.57■■□□□ 1.36
HCLS1-210ENST00000491824 FMN2Q9NZ56 1722 aa23.56■■□□□ 1.36
HCLS1-210ENST00000491824 ORAI2Q96SN7 254 aa23.56■■□□□ 1.36
HCLS1-210ENST00000491824 ADGRB2O60241 1585 aa23.56■■□□□ 1.36
HCLS1-210ENST00000491824 NPHP3Q7Z494 1330 aa23.56■■□□□ 1.36
HCLS1-210ENST00000491824 ARHGEF28Q8N1W1 1705 aaKnown RBP23.56■■□□□ 1.36
HCLS1-210ENST00000491824 NHSL1Q5SYE7 1610 aa23.55■■□□□ 1.36
HCLS1-210ENST00000491824 NBPF1Q3BBV0 1214 aa23.55■■□□□ 1.36
HCLS1-210ENST00000491824 LRRC59Q96AG4 307 aaKnown RBP23.55■■□□□ 1.36
HCLS1-210ENST00000491824 TIMELESSQ9UNS1 1208 aa23.55■■□□□ 1.36
HCLS1-210ENST00000491824 HIRIP3Q9BW71 556 aaPredicted RBP23.54■■□□□ 1.36
HCLS1-210ENST00000491824 ANKARQ7Z5J8 1434 aa23.53■■□□□ 1.36
HCLS1-210ENST00000491824 TRPM1Q7Z4N2 1603 aa23.52■■□□□ 1.36
HCLS1-210ENST00000491824 SPATA31A6Q5VVP1 1343 aa23.52■■□□□ 1.36
HCLS1-210ENST00000491824 KIF1AQ12756 1690 aa23.51■■□□□ 1.35
HCLS1-210ENST00000491824 CENPJQ9HC77 1338 aaPredicted RBP23.51■■□□□ 1.35
HCLS1-210ENST00000491824 WASLO00401 505 aaPredicted RBP23.5■■□□□ 1.35
HCLS1-210ENST00000491824 SHPRHQ149N8 1683 aa23.48■■□□□ 1.35
HCLS1-210ENST00000491824 MEX3CQ5U5Q3 659 aaKnown RBP23.48■■□□□ 1.35
HCLS1-210ENST00000491824 DDX17Q92841 729 aaKnown RBP23.48■■□□□ 1.35
HCLS1-210ENST00000491824 TULP4Q9NRJ4 1543 aa23.48■■□□□ 1.35
HCLS1-210ENST00000491824 FOXO3O43524 673 aa23.47■■□□□ 1.35
HCLS1-210ENST00000491824 PHF8Q9UPP1 1060 aa23.47■■□□□ 1.35
HCLS1-210ENST00000491824 SOS2Q07890 1332 aaPredicted RBP23.46■■□□□ 1.35
HCLS1-210ENST00000491824 CARD11Q9BXL7 1154 aa23.45■■□□□ 1.34
HCLS1-210ENST00000491824 RALGAPBQ86X10 1494 aa23.44■■□□□ 1.34
HCLS1-210ENST00000491824 PSME1Q06323 249 aa23.44■■□□□ 1.34
HCLS1-210ENST00000491824 NBPF8Q3BBV2 869 aa23.43■■□□□ 1.34
HCLS1-210ENST00000491824 GPRASP1Q5JY77 1395 aa23.42■■□□□ 1.34
HCLS1-210ENST00000491824 SRPK2P78362 688 aaKnown RBP23.41■■□□□ 1.34
HCLS1-210ENST00000491824 CDK19Q9BWU1 502 aa23.41■■□□□ 1.34
HCLS1-210ENST00000491824 QRICH2Q9H0J4 1663 aa23.41■■□□□ 1.34
HCLS1-210ENST00000491824 PNPLA6Q8IY17 1366 aa23.4■■□□□ 1.34
HCLS1-210ENST00000491824 NUTM2BA6NNL0 878 aaPredicted RBP23.4■■□□□ 1.34
HCLS1-210ENST00000491824 NUTM2EB1AL46 878 aaPredicted RBP23.4■■□□□ 1.34
HCLS1-210ENST00000491824 NUTM2AQ8IVF1 878 aaPredicted RBP23.4■■□□□ 1.34
HCLS1-210ENST00000491824 PXDNQ92626 1479 aa23.4■■□□□ 1.34
HCLS1-210ENST00000491824 ITSN1Q15811 1721 aa23.39■■□□□ 1.34
HCLS1-210ENST00000491824 XPCQ01831 940 aaPredicted RBP23.39■■□□□ 1.33
HCLS1-210ENST00000491824 EVC2Q86UK5 1308 aa23.38■■□□□ 1.33
HCLS1-210ENST00000491824 KRT28Q7Z3Y7 464 aa23.38■■□□□ 1.33
HCLS1-210ENST00000491824 NGDNQ8NEJ9 315 aaKnown RBP23.38■■□□□ 1.33
HCLS1-210ENST00000491824 PMFBP1Q8TBY8 1022 aa23.38■■□□□ 1.33
HCLS1-210ENST00000491824 NUDT16Q96DE0 195 aaKnown RBP23.38■■□□□ 1.33
HCLS1-210ENST00000491824 RGPD8O14715 1765 aaPredicted RBP23.37■■□□□ 1.33
HCLS1-210ENST00000491824 USP32Q8NFA0 1604 aa23.37■■□□□ 1.33
HCLS1-210ENST00000491824 ATP7BP35670 1465 aa23.36■■□□□ 1.33
HCLS1-210ENST00000491824 CCDC61Q9Y6R9 512 aa23.35■■□□□ 1.33
HCLS1-210ENST00000491824 PRR36Q9H6K5 1346 aa23.34■■□□□ 1.33
HCLS1-210ENST00000491824 ARHGEF10O15013 1369 aa23.33■■□□□ 1.33
HCLS1-210ENST00000491824 TNS3Q68CZ2 1445 aa23.33■■□□□ 1.32
HCLS1-210ENST00000491824 SBNO1A3KN83 1393 aa23.32■■□□□ 1.32
HCLS1-210ENST00000491824 ZEB1P37275 1124 aaPredicted RBP23.32■■□□□ 1.32
HCLS1-210ENST00000491824 HAP1P54257 671 aaPredicted RBP23.32■■□□□ 1.32
HCLS1-210ENST00000491824 LMOD2Q6P5Q4 547 aa23.32■■□□□ 1.32
HCLS1-210ENST00000491824 LRP6O75581 1613 aa23.32■■□□□ 1.32
HCLS1-210ENST00000491824 SPATA31A3Q5VYP0 1347 aa23.32■■□□□ 1.32
HCLS1-210ENST00000491824 SLC24A1O60721 1099 aa23.31■■□□□ 1.32
HCLS1-210ENST00000491824 COL22A1Q8NFW1 1626 aaPredicted RBP23.3■■□□□ 1.32
HCLS1-210ENST00000491824 SBNO2Q9Y2G9 1366 aa23.29■■□□□ 1.32
HCLS1-210ENST00000491824 ZNF772Q68DY9 489 aaPredicted RBP23.29■■□□□ 1.32
HCLS1-210ENST00000491824 CABP2Q9NPB3 220 aa23.29■■□□□ 1.32
HCLS1-210ENST00000491824 PAK3O75914 559 aaPredicted RBP23.28■■□□□ 1.32
HCLS1-210ENST00000491824 PPIP5K1Q6PFW1 1433 aa23.27■■□□□ 1.32
HCLS1-210ENST00000491824 ADAMTS2O95450 1211 aa23.27■■□□□ 1.32
HCLS1-210ENST00000491824 C8orf37Q96NL8 207 aa23.27■■□□□ 1.32
HCLS1-210ENST00000491824 TOPAZ1Q8N9V7 1692 aa23.26■■□□□ 1.31
HCLS1-210ENST00000491824 ATAD2Q6PL18 1390 aa23.26■■□□□ 1.31
HCLS1-210ENST00000491824 PLEKHG3A1L390 1219 aa23.24■■□□□ 1.31
HCLS1-210ENST00000491824 NGLY1Q96IV0 654 aa23.24■■□□□ 1.31
HCLS1-210ENST00000491824 ACEP12821 1306 aa23.24■■□□□ 1.31
HCLS1-210ENST00000491824 POLR3AO14802 1390 aaPredicted RBP23.24■■□□□ 1.31
HCLS1-210ENST00000491824 AFF2P51816 1311 aa23.21■■□□□ 1.31
HCLS1-210ENST00000491824 USP47Q96K76 1375 aa23.21■■□□□ 1.31
HCLS1-210ENST00000491824 PLEKHG5O94827 1062 aa23.2■■□□□ 1.3
HCLS1-210ENST00000491824 BRD4O60885 1362 aaPredicted RBP23.19■■□□□ 1.3
HCLS1-210ENST00000491824 CABP1Q9NZU7 370 aa23.19■■□□□ 1.3
HCLS1-210ENST00000491824 RGS17Q9UGC6 210 aaPredicted RBP23.19■■□□□ 1.3
HCLS1-210ENST00000491824 TRPM3Q9HCF6 1732 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms