RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 BCAR3O75815 825 aa13.75□□□□□ -0.21
SNED1-211ENST00000491761 GZF1Q9H116 711 aaPredicted RBP13.75□□□□□ -0.21
SNED1-211ENST00000491761 NSD3Q9BZ95 1437 aa13.74□□□□□ -0.21
SNED1-211ENST00000491761 SLKQ9H2G2 1235 aaPredicted RBP13.74□□□□□ -0.21
SNED1-211ENST00000491761 NKTRP30414 1462 aaKnown RBP13.74□□□□□ -0.21
SNED1-211ENST00000491761 SPHKAPQ2M3C7 1700 aa13.74□□□□□ -0.21
SNED1-211ENST00000491761 ARID3AQ99856 593 aa13.74□□□□□ -0.21
SNED1-211ENST00000491761 MYH16Q9H6N6 1097 aa13.74□□□□□ -0.21
SNED1-211ENST00000491761 SLC4A3P48751 1232 aa13.73□□□□□ -0.21
SNED1-211ENST00000491761 SKAP1Q86WV1 359 aa13.73□□□□□ -0.21
SNED1-211ENST00000491761 RNF17Q9BXT8 1623 aaKnown RBP13.73□□□□□ -0.21
SNED1-211ENST00000491761 U2SURPO15042 1029 aaKnown RBP13.73□□□□□ -0.21
SNED1-211ENST00000491761 MTHFSP49914 203 aa13.73□□□□□ -0.21
SNED1-211ENST00000491761 MYOM2P54296 1465 aa13.73□□□□□ -0.21
SNED1-211ENST00000491761 MAPK8IP3Q9UPT6 1336 aa13.72□□□□□ -0.21
SNED1-211ENST00000491761 PDE3AQ14432 1141 aa13.72□□□□□ -0.21
SNED1-211ENST00000491761 TCP11L2Q8N4U5 519 aa13.72□□□□□ -0.21
SNED1-211ENST00000491761 WWC1Q8IX03 1113 aa13.72□□□□□ -0.21
SNED1-211ENST00000491761 COG6Q9Y2V7 657 aa13.72□□□□□ -0.21
SNED1-211ENST00000491761 ZNF521Q96K83 1311 aa13.71□□□□□ -0.21
SNED1-211ENST00000491761 KDM5AP29375 1690 aaKnown RBP13.71□□□□□ -0.21
SNED1-211ENST00000491761 USP35Q9P2H5 1018 aa13.71□□□□□ -0.21
SNED1-211ENST00000491761 ANO8Q9HCE9 1232 aaPredicted RBP13.71□□□□□ -0.22
SNED1-211ENST00000491761 FTSJ3Q8IY81 847 aaKnown RBP13.7□□□□□ -0.22
SNED1-211ENST00000491761 UGGT1Q9NYU2 1555 aa13.7□□□□□ -0.22
SNED1-211ENST00000491761 ERVK-7P63135 1459 aa13.7□□□□□ -0.22
SNED1-211ENST00000491761 POLR3AO14802 1390 aaPredicted RBP13.7□□□□□ -0.22
SNED1-211ENST00000491761 PMFBP1Q8TBY8 1022 aa13.7□□□□□ -0.22
SNED1-211ENST00000491761 TERF2IPQ9NYB0 399 aa13.7□□□□□ -0.22
SNED1-211ENST00000491761 IQGAP1P46940 1657 aa13.69□□□□□ -0.22
SNED1-211ENST00000491761 SOX12O15370 315 aa13.69□□□□□ -0.22
SNED1-211ENST00000491761 RAPGEF3O95398 923 aa13.69□□□□□ -0.22
SNED1-211ENST00000491761 CEP152O94986 1710 aa13.69□□□□□ -0.22
SNED1-211ENST00000491761 SBNO2Q9Y2G9 1366 aa13.69□□□□□ -0.22
SNED1-211ENST00000491761 CLUAP1Q96AJ1 413 aa13.69□□□□□ -0.22
SNED1-211ENST00000491761 CABP2Q9NPB3 220 aa13.69□□□□□ -0.22
SNED1-211ENST00000491761 PANK1Q8TE04 598 aa13.69□□□□□ -0.22
SNED1-211ENST00000491761 NINLQ9Y2I6 1382 aa13.69□□□□□ -0.22
SNED1-211ENST00000491761 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
SNED1-211ENST00000491761 PLCB2Q00722 1185 aa13.67□□□□□ -0.22
SNED1-211ENST00000491761 HDGFL2Q7Z4V5 671 aaPredicted RBP13.67□□□□□ -0.22
SNED1-211ENST00000491761 WDR63Q8IWG1 891 aa13.67□□□□□ -0.22
SNED1-211ENST00000491761 KDM2BQ8NHM5 1336 aa13.67□□□□□ -0.22
SNED1-211ENST00000491761 INO80Q9ULG1 1556 aaPredicted RBP13.67□□□□□ -0.22
SNED1-211ENST00000491761 PNNQ9H307 717 aaKnown RBP13.67□□□□□ -0.22
SNED1-211ENST00000491761 MAP3K4Q9Y6R4 1608 aa13.67□□□□□ -0.22
SNED1-211ENST00000491761 DNTTIP2Q5QJE6 756 aaKnown RBP13.67□□□□□ -0.22
SNED1-211ENST00000491761 BCL2L13Q9BXK5 485 aa13.66□□□□□ -0.22
SNED1-211ENST00000491761 TRMT2AQ8IZ69 625 aaKnown RBP13.66□□□□□ -0.22
SNED1-211ENST00000491761 RWDD1Q9H446 243 aaPredicted RBP13.66□□□□□ -0.22
SNED1-211ENST00000491761 ABCA9Q8IUA7 1624 aa13.66□□□□□ -0.22
SNED1-211ENST00000491761 EFCAB6Q5THR3 1501 aa13.66□□□□□ -0.22
SNED1-211ENST00000491761 AAMPQ13685 434 aa13.66□□□□□ -0.22
SNED1-211ENST00000491761 SLC52A1Q9NWF4 448 aa13.66□□□□□ -0.22
SNED1-211ENST00000491761 PTMAP06454 111 aaKnown RBP13.65□□□□□ -0.22
SNED1-211ENST00000491761 KIF1BO60333 1816 aa13.65□□□□□ -0.22
SNED1-211ENST00000491761 MINK1Q8N4C8 1332 aaPredicted RBP13.65□□□□□ -0.22
SNED1-211ENST00000491761 NPATQ14207 1427 aa13.65□□□□□ -0.23
SNED1-211ENST00000491761 DEPDC5O75140 1603 aa13.64□□□□□ -0.23
SNED1-211ENST00000491761 PUS7Q96PZ0 661 aaKnown RBP13.64□□□□□ -0.23
SNED1-211ENST00000491761 POGZQ7Z3K3 1410 aa13.64□□□□□ -0.23
SNED1-211ENST00000491761 VWDEQ8N2E2 1590 aa13.63□□□□□ -0.23
SNED1-211ENST00000491761 GGNBP2Q9H3C7 697 aa13.63□□□□□ -0.23
SNED1-211ENST00000491761 KIAA1210Q9ULL0 1709 aa13.63□□□□□ -0.23
SNED1-211ENST00000491761 ZKSCAN2Q63HK3 967 aa13.62□□□□□ -0.23
SNED1-211ENST00000491761 SMC4Q9NTJ3 1288 aa13.62□□□□□ -0.23
SNED1-211ENST00000491761 RARSP54136 660 aaKnown RBP13.62□□□□□ -0.23
SNED1-211ENST00000491761 IDI1Q13907 227 aa13.62□□□□□ -0.23
SNED1-211ENST00000491761 DMRT2Q9Y5R5 561 aa13.62□□□□□ -0.23
SNED1-211ENST00000491761 NSD2O96028 1365 aa13.62□□□□□ -0.23
SNED1-211ENST00000491761 ABCA6Q8N139 1617 aa13.62□□□□□ -0.23
SNED1-211ENST00000491761 GOLGA6L22H0YM25 854 aa13.61□□□□□ -0.23
SNED1-211ENST00000491761 NEURL4Q96JN8 1562 aa13.61□□□□□ -0.23
SNED1-211ENST00000491761 ANKRD36BQ8N2N9 1353 aa13.6□□□□□ -0.23
SNED1-211ENST00000491761 MLH3Q9UHC1 1453 aa13.6□□□□□ -0.23
SNED1-211ENST00000491761 LMTK2Q8IWU2 1503 aa13.6□□□□□ -0.23
SNED1-211ENST00000491761 PRAM1Q96QH2 718 aa13.59□□□□□ -0.23
SNED1-211ENST00000491761 TAOK2Q9UL54 1235 aa13.59□□□□□ -0.23
SNED1-211ENST00000491761 IGHDP01880 384 aa13.59□□□□□ -0.23
SNED1-211ENST00000491761 IPO8O15397 1037 aaKnown RBP13.59□□□□□ -0.23
SNED1-211ENST00000491761 DZIP1LQ8IYY4 767 aaKnown RBP13.59□□□□□ -0.23
SNED1-211ENST00000491761 DIAPH1O60610 1272 aaKnown RBP13.58□□□□□ -0.23
SNED1-211ENST00000491761 C8orf34Q49A92 452 aa13.58□□□□□ -0.23
SNED1-211ENST00000491761 ATAD2Q6PL18 1390 aa13.58□□□□□ -0.24
SNED1-211ENST00000491761 NUTM2FA1L443 756 aa13.58□□□□□ -0.24
SNED1-211ENST00000491761 CCDC27Q2M243 656 aa13.58□□□□□ -0.24
SNED1-211ENST00000491761 ITPRIPQ8IWB1 547 aa13.58□□□□□ -0.24
SNED1-211ENST00000491761 CFAP65Q6ZU64 1925 aaKnown RBP13.58□□□□□ -0.24
SNED1-211ENST00000491761 ADGRB3O60242 1522 aa13.57□□□□□ -0.24
SNED1-211ENST00000491761 CT47B1P0C2W7 299 aaPredicted RBP13.57□□□□□ -0.24
SNED1-211ENST00000491761 CFAP74Q9C0B2 1584 aa13.57□□□□□ -0.24
SNED1-211ENST00000491761 PPRC1Q5VV67 1664 aaKnown RBP13.57□□□□□ -0.24
SNED1-211ENST00000491761 HSP90AB1P08238 724 aaKnown RBP13.57□□□□□ -0.24
SNED1-211ENST00000491761 RIPK4P57078 832 aa13.57□□□□□ -0.24
SNED1-211ENST00000491761 NFKBIBQ15653 356 aa13.56□□□□□ -0.24
SNED1-211ENST00000491761 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.56□□□□□ -0.24
SNED1-211ENST00000491761 NRXN1Q9ULB1 1477 aa13.56□□□□□ -0.24
SNED1-211ENST00000491761 SETBP1Q9Y6X0 1596 aa13.55□□□□□ -0.24
SNED1-211ENST00000491761 EXOSC9Q06265 439 aaKnown RBP13.55□□□□□ -0.24
SNED1-211ENST00000491761 TSR2Q969E8 191 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms