RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 TECPR2O15040 1411 aa16.37■□□□□ 0.21
TMEM39A-211ENST00000491685 PLEKHH1Q9ULM0 1364 aa16.37■□□□□ 0.21
TMEM39A-211ENST00000491685 ANKRD30BQ9BXX2 1392 aa16.36■□□□□ 0.21
TMEM39A-211ENST00000491685 RGPD8O14715 1765 aaPredicted RBP16.36■□□□□ 0.21
TMEM39A-211ENST00000491685 RGS12O14924 1447 aa16.36■□□□□ 0.21
TMEM39A-211ENST00000491685 AFF2P51816 1311 aa16.35■□□□□ 0.21
TMEM39A-211ENST00000491685 LRPPRCP42704 1394 aaKnown RBP16.35■□□□□ 0.21
TMEM39A-211ENST00000491685 RAB3GAP2Q9H2M9 1393 aa16.35■□□□□ 0.21
TMEM39A-211ENST00000491685 NRXN1Q9ULB1 1477 aa16.35■□□□□ 0.21
TMEM39A-211ENST00000491685 MARF1Q9Y4F3 1742 aaKnown RBP16.34■□□□□ 0.21
TMEM39A-211ENST00000491685 LRRC59Q96AG4 307 aaKnown RBP16.34■□□□□ 0.21
TMEM39A-211ENST00000491685 PXDNQ92626 1479 aa16.34■□□□□ 0.21
TMEM39A-211ENST00000491685 SRCAPQ6ZRS2 3230 aa16.34■□□□□ 0.21
TMEM39A-211ENST00000491685 TMEM132EQ6IEE7 984 aa16.33■□□□□ 0.2
TMEM39A-211ENST00000491685 STK26Q9P289 416 aa16.33■□□□□ 0.2
TMEM39A-211ENST00000491685 SOS2Q07890 1332 aaPredicted RBP16.33■□□□□ 0.2
TMEM39A-211ENST00000491685 ACIN1Q9UKV3 1341 aaKnown RBP16.33■□□□□ 0.2
TMEM39A-211ENST00000491685 MYOM2P54296 1465 aa16.33■□□□□ 0.2
TMEM39A-211ENST00000491685 WAPLQ7Z5K2 1190 aa16.32■□□□□ 0.2
TMEM39A-211ENST00000491685 YTHDC2Q9H6S0 1430 aaKnown RBP16.32■□□□□ 0.2
TMEM39A-211ENST00000491685 KIF1AQ12756 1690 aa16.3■□□□□ 0.2
TMEM39A-211ENST00000491685 ABCC11Q96J66 1382 aa16.3■□□□□ 0.2
TMEM39A-211ENST00000491685 C8orf37Q96NL8 207 aa16.3■□□□□ 0.2
TMEM39A-211ENST00000491685 NUTM2FA1L443 756 aa16.28■□□□□ 0.2
TMEM39A-211ENST00000491685 ADAMTS2O95450 1211 aa16.28■□□□□ 0.2
TMEM39A-211ENST00000491685 RBM6P78332 1123 aaKnown RBP16.28■□□□□ 0.2
TMEM39A-211ENST00000491685 USP32Q8NFA0 1604 aa16.27■□□□□ 0.2
TMEM39A-211ENST00000491685 XPCQ01831 940 aaPredicted RBP16.27■□□□□ 0.2
TMEM39A-211ENST00000491685 ESCO1Q5FWF5 840 aa16.27■□□□□ 0.2
TMEM39A-211ENST00000491685 ADGRB1O14514 1584 aa16.26■□□□□ 0.19
TMEM39A-211ENST00000491685 TRIM26Q12899 539 aaPredicted RBP16.26■□□□□ 0.19
TMEM39A-211ENST00000491685 CFAP70Q5T0N1 1121 aa16.26■□□□□ 0.19
TMEM39A-211ENST00000491685 ABCA3Q99758 1704 aa16.25■□□□□ 0.19
TMEM39A-211ENST00000491685 C14orf93Q9H972 538 aaKnown RBP16.25■□□□□ 0.19
TMEM39A-211ENST00000491685 QTRT2Q9H974 415 aaKnown RBP16.25■□□□□ 0.19
TMEM39A-211ENST00000491685 ATAD2Q6PL18 1390 aa16.25■□□□□ 0.19
TMEM39A-211ENST00000491685 DLC1Q96QB1 1528 aa16.24■□□□□ 0.19
TMEM39A-211ENST00000491685 NPHP3Q7Z494 1330 aa16.23■□□□□ 0.19
TMEM39A-211ENST00000491685 EP400Q96L91 3159 aa16.23■□□□□ 0.19
TMEM39A-211ENST00000491685 ADGRB2O60241 1585 aa16.23■□□□□ 0.19
TMEM39A-211ENST00000491685 FOXO3O43524 673 aa16.23■□□□□ 0.19
TMEM39A-211ENST00000491685 NGLY1Q96IV0 654 aa16.21■□□□□ 0.19
TMEM39A-211ENST00000491685 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.21■□□□□ 0.19
TMEM39A-211ENST00000491685 ARHGEF28Q8N1W1 1705 aaKnown RBP16.2■□□□□ 0.18
TMEM39A-211ENST00000491685 ATRNO75882 1429 aa16.19■□□□□ 0.18
TMEM39A-211ENST00000491685 DHX57Q6P158 1386 aaKnown RBP16.19■□□□□ 0.18
TMEM39A-211ENST00000491685 SAFB2Q14151 953 aaKnown RBP eCLIP16.19■□□□□ 0.18
TMEM39A-211ENST00000491685 TRPM3Q9HCF6 1732 aaPredicted RBP16.19■□□□□ 0.18
TMEM39A-211ENST00000491685 SIRT1Q96EB6 747 aa16.18■□□□□ 0.18
TMEM39A-211ENST00000491685 PRAM1Q96QH2 718 aa16.18■□□□□ 0.18
TMEM39A-211ENST00000491685 USP21Q9UK80 565 aa16.18■□□□□ 0.18
TMEM39A-211ENST00000491685 PLCH1Q4KWH8 1693 aa16.18■□□□□ 0.18
TMEM39A-211ENST00000491685 BCL9LQ86UU0 1499 aa16.17■□□□□ 0.18
TMEM39A-211ENST00000491685 FNBP4Q8N3X1 1017 aaPredicted RBP16.16■□□□□ 0.18
TMEM39A-211ENST00000491685 SPATA31A3Q5VYP0 1347 aa16.16■□□□□ 0.18
TMEM39A-211ENST00000491685 GLI3P10071 1580 aa16.15■□□□□ 0.18
TMEM39A-211ENST00000491685 TNS3Q68CZ2 1445 aa16.15■□□□□ 0.18
TMEM39A-211ENST00000491685 ZRANB1Q9UGI0 708 aa16.15■□□□□ 0.18
TMEM39A-211ENST00000491685 ALS2Q96Q42 1657 aa16.14■□□□□ 0.18
TMEM39A-211ENST00000491685 HRCP23327 699 aa16.14■□□□□ 0.17
TMEM39A-211ENST00000491685 TRPC5Q9UL62 973 aaPredicted RBP16.14■□□□□ 0.17
TMEM39A-211ENST00000491685 KDM2AQ9Y2K7 1162 aa16.14■□□□□ 0.17
TMEM39A-211ENST00000491685 CRYBG1Q9Y4K1 1723 aa16.14■□□□□ 0.17
TMEM39A-211ENST00000491685 BRWD3Q6RI45 1802 aa16.13■□□□□ 0.17
TMEM39A-211ENST00000491685 KRT28Q7Z3Y7 464 aa16.13■□□□□ 0.17
TMEM39A-211ENST00000491685 PHF8Q9UPP1 1060 aa16.13■□□□□ 0.17
TMEM39A-211ENST00000491685 TRAK1Q9UPV9 953 aa16.13■□□□□ 0.17
TMEM39A-211ENST00000491685 SLIT2O94813 1529 aa16.13■□□□□ 0.17
TMEM39A-211ENST00000491685 ANKARQ7Z5J8 1434 aa16.12■□□□□ 0.17
TMEM39A-211ENST00000491685 DCAF11Q8TEB1 546 aa16.12■□□□□ 0.17
TMEM39A-211ENST00000491685 HIRIP3Q9BW71 556 aaPredicted RBP16.12■□□□□ 0.17
TMEM39A-211ENST00000491685 TULP4Q9NRJ4 1543 aa16.12■□□□□ 0.17
TMEM39A-211ENST00000491685 ITSN1Q15811 1721 aa16.11■□□□□ 0.17
TMEM39A-211ENST00000491685 NRAPQ86VF7 1730 aa16.11■□□□□ 0.17
TMEM39A-211ENST00000491685 NWD2Q9ULI1 1742 aa16.11■□□□□ 0.17
TMEM39A-211ENST00000491685 CCDC125Q86Z20 511 aa16.11■□□□□ 0.17
TMEM39A-211ENST00000491685 POGKQ9P215 609 aa16.11■□□□□ 0.17
TMEM39A-211ENST00000491685 PRR36Q9H6K5 1346 aa16.11■□□□□ 0.17
TMEM39A-211ENST00000491685 KIAA1210Q9ULL0 1709 aa16.11■□□□□ 0.17
TMEM39A-211ENST00000491685 MINK1Q8N4C8 1332 aaPredicted RBP16.1■□□□□ 0.17
TMEM39A-211ENST00000491685 TOPAZ1Q8N9V7 1692 aa16.09■□□□□ 0.17
TMEM39A-211ENST00000491685 PLEKHG5O94827 1062 aa16.09■□□□□ 0.17
TMEM39A-211ENST00000491685 PMFBP1Q8TBY8 1022 aa16.09■□□□□ 0.17
TMEM39A-211ENST00000491685 CABLES1Q8TDN4 633 aa16.09■□□□□ 0.17
TMEM39A-211ENST00000491685 SBNO1A3KN83 1393 aa16.09■□□□□ 0.17
TMEM39A-211ENST00000491685 RALGAPBQ86X10 1494 aa16.09■□□□□ 0.17
TMEM39A-211ENST00000491685 LRP5O75197 1615 aa16.08■□□□□ 0.17
TMEM39A-211ENST00000491685 ATP7BP35670 1465 aa16.07■□□□□ 0.16
TMEM39A-211ENST00000491685 PHRF1Q9P1Y6 1649 aaKnown RBP16.05■□□□□ 0.16
TMEM39A-211ENST00000491685 ARHGEF10O15013 1369 aa16.04■□□□□ 0.16
TMEM39A-211ENST00000491685 PSME1Q06323 249 aa16.04■□□□□ 0.16
TMEM39A-211ENST00000491685 UNC5CLQ8IV45 518 aa16.04■□□□□ 0.16
TMEM39A-211ENST00000491685 GJD4Q96KN9 370 aaPredicted RBP16.04■□□□□ 0.16
TMEM39A-211ENST00000491685 WASLO00401 505 aaPredicted RBP16.03■□□□□ 0.16
TMEM39A-211ENST00000491685 LMOD2Q6P5Q4 547 aa16.03■□□□□ 0.16
TMEM39A-211ENST00000491685 COL14A1Q05707 1796 aaKnown RBP16.03■□□□□ 0.16
TMEM39A-211ENST00000491685 BLMP54132 1417 aaPredicted RBP16.02■□□□□ 0.16
TMEM39A-211ENST00000491685 EIF3AQ14152 1382 aaKnown RBP16.02■□□□□ 0.16
TMEM39A-211ENST00000491685 PCGF6Q9BYE7 350 aa16.02■□□□□ 0.16
TMEM39A-211ENST00000491685 HAP1P54257 671 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms