RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 ATRNO75882 1429 aa21.19■□□□□ 0.98
NCK1-211ENST00000491539 QTRT2Q9H974 415 aaKnown RBP21.18■□□□□ 0.98
NCK1-211ENST00000491539 FMN2Q9NZ56 1722 aa21.18■□□□□ 0.98
NCK1-211ENST00000491539 RGPD8O14715 1765 aaPredicted RBP21.17■□□□□ 0.98
NCK1-211ENST00000491539 GLI3P10071 1580 aa21.16■□□□□ 0.98
NCK1-211ENST00000491539 SOS2Q07890 1332 aaPredicted RBP21.16■□□□□ 0.98
NCK1-211ENST00000491539 ORAI2Q96SN7 254 aa21.16■□□□□ 0.98
NCK1-211ENST00000491539 PLCH1Q4KWH8 1693 aa21.15■□□□□ 0.98
NCK1-211ENST00000491539 ATAD2Q6PL18 1390 aa21.15■□□□□ 0.98
NCK1-211ENST00000491539 NAIPQ13075 1403 aa21.13■□□□□ 0.97
NCK1-211ENST00000491539 USP32Q8NFA0 1604 aa21.12■□□□□ 0.97
NCK1-211ENST00000491539 NGLY1Q96IV0 654 aa21.11■□□□□ 0.97
NCK1-211ENST00000491539 BCL9LQ86UU0 1499 aa21.11■□□□□ 0.97
NCK1-211ENST00000491539 KIF1AQ12756 1690 aa21.11■□□□□ 0.97
NCK1-211ENST00000491539 USP21Q9UK80 565 aa21.09■□□□□ 0.97
NCK1-211ENST00000491539 HFM1A2PYH4 1435 aa21.09■□□□□ 0.97
NCK1-211ENST00000491539 FNBP4Q8N3X1 1017 aaPredicted RBP21.05■□□□□ 0.96
NCK1-211ENST00000491539 TRPC5Q9UL62 973 aaPredicted RBP21.04■□□□□ 0.96
NCK1-211ENST00000491539 NWD2Q9ULI1 1742 aa21.04■□□□□ 0.96
NCK1-211ENST00000491539 XPCQ01831 940 aaPredicted RBP21.03■□□□□ 0.96
NCK1-211ENST00000491539 NRAPQ86VF7 1730 aa21.03■□□□□ 0.96
NCK1-211ENST00000491539 TECPR2O15040 1411 aa21.02■□□□□ 0.96
NCK1-211ENST00000491539 RALGAPBQ86X10 1494 aa21.01■□□□□ 0.95
NCK1-211ENST00000491539 LRP5O75197 1615 aa21.01■□□□□ 0.95
NCK1-211ENST00000491539 SLIT2O94813 1529 aa21.01■□□□□ 0.95
NCK1-211ENST00000491539 PLEKHH1Q9ULM0 1364 aa20.99■□□□□ 0.95
NCK1-211ENST00000491539 CRYBG1Q9Y4K1 1723 aa20.97■□□□□ 0.95
NCK1-211ENST00000491539 NPHP3Q7Z494 1330 aa20.97■□□□□ 0.95
NCK1-211ENST00000491539 TRPM3Q9HCF6 1732 aaPredicted RBP20.95■□□□□ 0.94
NCK1-211ENST00000491539 ESCO1Q5FWF5 840 aa20.95■□□□□ 0.94
NCK1-211ENST00000491539 SPATA31E1Q6ZUB1 1445 aa20.95■□□□□ 0.94
NCK1-211ENST00000491539 NUTM2FA1L443 756 aa20.94■□□□□ 0.94
NCK1-211ENST00000491539 VGFO15240 615 aaPredicted RBP20.94■□□□□ 0.94
NCK1-211ENST00000491539 ADGRF5Q8IZF2 1346 aa20.94■□□□□ 0.94
NCK1-211ENST00000491539 PIK3C2GO75747 1445 aa20.93■□□□□ 0.94
NCK1-211ENST00000491539 TNS1Q9HBL0 1735 aaKnown RBP20.92■□□□□ 0.94
NCK1-211ENST00000491539 FOXO3O43524 673 aa20.92■□□□□ 0.94
NCK1-211ENST00000491539 FOXD1Q16676 465 aa20.91■□□□□ 0.94
NCK1-211ENST00000491539 ALS2Q96Q42 1657 aa20.91■□□□□ 0.94
NCK1-211ENST00000491539 ZRANB1Q9UGI0 708 aa20.91■□□□□ 0.94
NCK1-211ENST00000491539 BLMP54132 1417 aaPredicted RBP20.9■□□□□ 0.94
NCK1-211ENST00000491539 LRPPRCP42704 1394 aaKnown RBP20.9■□□□□ 0.94
NCK1-211ENST00000491539 RPGRIP1LQ68CZ1 1315 aa20.9■□□□□ 0.94
NCK1-211ENST00000491539 WAPLQ7Z5K2 1190 aa20.9■□□□□ 0.94
NCK1-211ENST00000491539 GJD4Q96KN9 370 aaPredicted RBP20.9■□□□□ 0.94
NCK1-211ENST00000491539 CCDC144AA2RUR9 1427 aa20.89■□□□□ 0.94
NCK1-211ENST00000491539 TNS3Q68CZ2 1445 aa20.89■□□□□ 0.94
NCK1-211ENST00000491539 RGPD1P0DJD0 1748 aa20.89■□□□□ 0.93
NCK1-211ENST00000491539 STK26Q9P289 416 aa20.87■□□□□ 0.93
NCK1-211ENST00000491539 ADGRB2O60241 1585 aa20.87■□□□□ 0.93
NCK1-211ENST00000491539 YTHDC2Q9H6S0 1430 aaKnown RBP20.87■□□□□ 0.93
NCK1-211ENST00000491539 SPATA31A3Q5VYP0 1347 aa20.86■□□□□ 0.93
NCK1-211ENST00000491539 DEFB132Q7Z7B7 95 aa20.85■□□□□ 0.93
NCK1-211ENST00000491539 SLC4A1APQ9BWU0 796 aaKnown RBP20.85■□□□□ 0.93
NCK1-211ENST00000491539 NRXN1Q9ULB1 1477 aa20.85■□□□□ 0.93
NCK1-211ENST00000491539 TMEM132EQ6IEE7 984 aa20.84■□□□□ 0.93
NCK1-211ENST00000491539 THSD7AQ9UPZ6 1657 aa20.83■□□□□ 0.93
NCK1-211ENST00000491539 UNC5CLQ8IV45 518 aa20.83■□□□□ 0.93
NCK1-211ENST00000491539 ABCC11Q96J66 1382 aa20.83■□□□□ 0.92
NCK1-211ENST00000491539 COL14A1Q05707 1796 aaKnown RBP20.82■□□□□ 0.92
NCK1-211ENST00000491539 PHRF1Q9P1Y6 1649 aaKnown RBP20.8■□□□□ 0.92
NCK1-211ENST00000491539 CCDC125Q86Z20 511 aa20.8■□□□□ 0.92
NCK1-211ENST00000491539 CABLES1Q8TDN4 633 aa20.8■□□□□ 0.92
NCK1-211ENST00000491539 PLEKHG5O94827 1062 aa20.79■□□□□ 0.92
NCK1-211ENST00000491539 ANKRD30BQ9BXX2 1392 aa20.78■□□□□ 0.92
NCK1-211ENST00000491539 RGL3Q3MIN7 710 aa20.77■□□□□ 0.92
NCK1-211ENST00000491539 ADGRB1O14514 1584 aa20.76■□□□□ 0.91
NCK1-211ENST00000491539 SEPT12Q8IYM1 358 aa20.76■□□□□ 0.91
NCK1-211ENST00000491539 ARHGEF28Q8N1W1 1705 aaKnown RBP20.75■□□□□ 0.91
NCK1-211ENST00000491539 DLC1Q96QB1 1528 aa20.75■□□□□ 0.91
NCK1-211ENST00000491539 KRT28Q7Z3Y7 464 aa20.75■□□□□ 0.91
NCK1-211ENST00000491539 ITSN1Q15811 1721 aa20.75■□□□□ 0.91
NCK1-211ENST00000491539 RREB1Q92766 1687 aa20.74■□□□□ 0.91
NCK1-211ENST00000491539 MPHOSPH9Q99550 1183 aa20.74■□□□□ 0.91
NCK1-211ENST00000491539 VPS72Q15906 364 aa20.73■□□□□ 0.91
NCK1-211ENST00000491539 ACIN1Q9UKV3 1341 aaKnown RBP20.73■□□□□ 0.91
NCK1-211ENST00000491539 SBNO1A3KN83 1393 aa20.72■□□□□ 0.91
NCK1-211ENST00000491539 NUP188Q5SRE5 1749 aa20.72■□□□□ 0.91
NCK1-211ENST00000491539 PHF8Q9UPP1 1060 aa20.71■□□□□ 0.91
NCK1-211ENST00000491539 TOPAZ1Q8N9V7 1692 aa20.7■□□□□ 0.91
NCK1-211ENST00000491539 PSDA5PKW4 1024 aaPredicted RBP20.7■□□□□ 0.9
NCK1-211ENST00000491539 ANKARQ7Z5J8 1434 aa20.7■□□□□ 0.9
NCK1-211ENST00000491539 TULP4Q9NRJ4 1543 aa20.69■□□□□ 0.9
NCK1-211ENST00000491539 ARHGEF10O15013 1369 aa20.69■□□□□ 0.9
NCK1-211ENST00000491539 SAFB2Q14151 953 aaKnown RBP eCLIP20.68■□□□□ 0.92e-6■■□□□ 12.2
NCK1-211ENST00000491539 RAB3GAP2Q9H2M9 1393 aa20.68■□□□□ 0.9
NCK1-211ENST00000491539 HAP1P54257 671 aaPredicted RBP20.67■□□□□ 0.9
NCK1-211ENST00000491539 KRT27Q7Z3Y8 459 aa20.67■□□□□ 0.9
NCK1-211ENST00000491539 CCDC9Q9Y3X0 531 aaKnown RBP20.67■□□□□ 0.9
NCK1-211ENST00000491539 ONECUT3O60422 494 aaPredicted RBP20.66■□□□□ 0.9
NCK1-211ENST00000491539 FAM83GA6ND36 823 aa20.65■□□□□ 0.9
NCK1-211ENST00000491539 CFAP70Q5T0N1 1121 aa20.65■□□□□ 0.9
NCK1-211ENST00000491539 PRAM1Q96QH2 718 aa20.65■□□□□ 0.9
NCK1-211ENST00000491539 NRKQ7Z2Y5 1582 aa20.64■□□□□ 0.9
NCK1-211ENST00000491539 FAM182BQ5T319 152 aa20.64■□□□□ 0.89
NCK1-211ENST00000491539 LMOD2Q6P5Q4 547 aa20.64■□□□□ 0.89
NCK1-211ENST00000491539 PMFBP1Q8TBY8 1022 aa20.64■□□□□ 0.89
NCK1-211ENST00000491539 PRR36Q9H6K5 1346 aa20.63■□□□□ 0.89
NCK1-211ENST00000491539 SF3B2Q13435 895 aaKnown RBP20.63■□□□□ 0.89
NCK1-211ENST00000491539 FAM98CQ17RN3 349 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms