RNA–Protein interactions for RNA: ENST00000491525.5

NECTIN3-210, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-210ENST00000491525 MBD5Q9P267 1494 aa11.85□□□□□ -0.51
NECTIN3-210ENST00000491525 FOSBP53539 338 aa11.85□□□□□ -0.51
NECTIN3-210ENST00000491525 ZNF777Q9ULD5 760 aaPredicted RBP11.85□□□□□ -0.51
NECTIN3-210ENST00000491525 ARID4BQ4LE39 1312 aaPredicted RBP11.85□□□□□ -0.51
NECTIN3-210ENST00000491525 INO80Q9ULG1 1556 aaPredicted RBP11.84□□□□□ -0.51
NECTIN3-210ENST00000491525 PTPRMP28827 1452 aa11.84□□□□□ -0.51
NECTIN3-210ENST00000491525 PSEN2P49810 448 aa11.84□□□□□ -0.51
NECTIN3-210ENST00000491525 KANK4Q5T7N3 995 aaPredicted RBP11.84□□□□□ -0.51
NECTIN3-210ENST00000491525 KCNK17Q96T54 332 aa11.84□□□□□ -0.51
NECTIN3-210ENST00000491525 ZNF644Q9H582 1327 aaPredicted RBP11.84□□□□□ -0.51
NECTIN3-210ENST00000491525 HNRNPMP52272 730 aaKnown RBP eCLIP11.83□□□□□ -0.52
NECTIN3-210ENST00000491525 ADGRD1Q6QNK2 874 aa11.83□□□□□ -0.52
NECTIN3-210ENST00000491525 CAMSAP2Q08AD1 1489 aa11.83□□□□□ -0.52
NECTIN3-210ENST00000491525 AGLP35573 1532 aa11.82□□□□□ -0.52
NECTIN3-210ENST00000491525 ATP7AQ04656 1500 aa11.82□□□□□ -0.52
NECTIN3-210ENST00000491525 TK2O00142 265 aa11.82□□□□□ -0.52
NECTIN3-210ENST00000491525 ZDHHC16Q969W1 377 aa11.82□□□□□ -0.52
NECTIN3-210ENST00000491525 STAC3Q96MF2 364 aa11.82□□□□□ -0.52
NECTIN3-210ENST00000491525 BCL2L12Q9HB09 334 aa11.82□□□□□ -0.52
NECTIN3-210ENST00000491525 PTPREP23469 700 aa11.81□□□□□ -0.52
NECTIN3-210ENST00000491525 RIMS1Q86UR5 1692 aaKnown RBP11.81□□□□□ -0.52
NECTIN3-210ENST00000491525 MYOM3Q5VTT5 1437 aa11.8□□□□□ -0.52
NECTIN3-210ENST00000491525 DPYSL4O14531 572 aa11.8□□□□□ -0.52
NECTIN3-210ENST00000491525 DMRTA1Q5VZB9 504 aa11.8□□□□□ -0.52
NECTIN3-210ENST00000491525 SPAG9O60271 1321 aaKnown RBP11.8□□□□□ -0.52
NECTIN3-210ENST00000491525 PLXNC1O60486 1568 aa11.79□□□□□ -0.52
NECTIN3-210ENST00000491525 CCDC141Q6ZP82 1450 aa11.79□□□□□ -0.52
NECTIN3-210ENST00000491525 E2F4Q16254 413 aa11.78□□□□□ -0.52
NECTIN3-210ENST00000491525 ARHGEF5Q12774 1597 aa11.78□□□□□ -0.52
NECTIN3-210ENST00000491525 RTEL1-TNFRSF6BF6WH68 1400 aa11.77□□□□□ -0.52
NECTIN3-210ENST00000491525 MIA2Q96PC5 1412 aa11.77□□□□□ -0.52
NECTIN3-210ENST00000491525 FER1L4A9Z1Z3 1794 aa11.77□□□□□ -0.52
NECTIN3-210ENST00000491525 MLECQ14165 292 aa11.76□□□□□ -0.53
NECTIN3-210ENST00000491525 FBXW7Q969H0 707 aa11.76□□□□□ -0.53
NECTIN3-210ENST00000491525 A2MP01023 1474 aa11.76□□□□□ -0.53
NECTIN3-210ENST00000491525 PHF14O94880 888 aa11.75□□□□□ -0.53
NECTIN3-210ENST00000491525 ADAM33Q9BZ11 813 aa11.75□□□□□ -0.53
NECTIN3-210ENST00000491525 PCDHGA10Q9Y5H3 936 aa11.75□□□□□ -0.53
NECTIN3-210ENST00000491525 TYW1BQ6NUM6 668 aa11.74□□□□□ -0.53
NECTIN3-210ENST00000491525 ADGBQ8N7X0 1667 aa11.74□□□□□ -0.53
NECTIN3-210ENST00000491525 EPAS1Q99814 870 aa11.73□□□□□ -0.53
NECTIN3-210ENST00000491525 MAST1Q9Y2H9 1570 aa11.73□□□□□ -0.53
NECTIN3-210ENST00000491525 TCOF1Q13428 1488 aaKnown RBP11.72□□□□□ -0.53
NECTIN3-210ENST00000491525 LMTK3Q96Q04 1460 aa11.72□□□□□ -0.53
NECTIN3-210ENST00000491525 FGD6Q6ZV73 1430 aa11.72□□□□□ -0.53
NECTIN3-210ENST00000491525 SPDYE16A6NNV3 312 aaPredicted RBP11.72□□□□□ -0.53
NECTIN3-210ENST00000491525 RSPH4AQ5TD94 716 aa11.72□□□□□ -0.53
NECTIN3-210ENST00000491525 SLC4A5Q9BY07 1137 aa11.71□□□□□ -0.53
NECTIN3-210ENST00000491525 VPS9D1Q9Y2B5 631 aa11.71□□□□□ -0.53
NECTIN3-210ENST00000491525 PTPN23Q9H3S7 1636 aa11.71□□□□□ -0.54
NECTIN3-210ENST00000491525 CNTLNQ9NXG0 1405 aa11.7□□□□□ -0.54
NECTIN3-210ENST00000491525 DHX29Q7Z478 1369 aaKnown RBP11.7□□□□□ -0.54
NECTIN3-210ENST00000491525 HRO43593 1189 aa11.7□□□□□ -0.54
NECTIN3-210ENST00000491525 TSHZ2Q9NRE2 1034 aa11.69□□□□□ -0.54
NECTIN3-210ENST00000491525 SHANK2Q9UPX8 1470 aa11.69□□□□□ -0.54
NECTIN3-210ENST00000491525 PDIA6Q15084 440 aa11.68□□□□□ -0.54
NECTIN3-210ENST00000491525 DDX12PQ92771 950 aa11.68□□□□□ -0.54
NECTIN3-210ENST00000491525 MROH2AA6NES4 1674 aa11.68□□□□□ -0.54
NECTIN3-210ENST00000491525 CROCC2H7BZ55 1655 aa11.68□□□□□ -0.54
NECTIN3-210ENST00000491525 ABCC5O15440 1437 aa11.68□□□□□ -0.54
NECTIN3-210ENST00000491525 DNMT1P26358 1616 aaKnown RBP11.68□□□□□ -0.54
NECTIN3-210ENST00000491525 CEBPAP49715 358 aaPredicted RBP11.67□□□□□ -0.54
NECTIN3-210ENST00000491525 ZBED2Q9BTP6 218 aa11.67□□□□□ -0.54
NECTIN3-210ENST00000491525 C3P01024 1663 aa11.67□□□□□ -0.54
NECTIN3-210ENST00000491525 PPP1R3GB7ZBB8 358 aa11.66□□□□□ -0.54
NECTIN3-210ENST00000491525 TSPY4P0CV99 314 aa11.66□□□□□ -0.54
NECTIN3-210ENST00000491525 TSPY10P0CW01 314 aa11.66□□□□□ -0.54
NECTIN3-210ENST00000491525 ARIH1Q9Y4X5 557 aaPredicted RBP11.66□□□□□ -0.54
NECTIN3-210ENST00000491525 DAPK1P53355 1430 aa11.66□□□□□ -0.54
NECTIN3-210ENST00000491525 FAM135AQ9P2D6 1515 aa11.65□□□□□ -0.54
NECTIN3-210ENST00000491525 HCSTQ9UBK5 93 aa11.65□□□□□ -0.54
NECTIN3-210ENST00000491525 PREX1Q8TCU6 1659 aa11.65□□□□□ -0.55
NECTIN3-210ENST00000491525 GOLGA8CPA6NN73 597 aa11.64□□□□□ -0.55
NECTIN3-210ENST00000491525 CLTCQ00610 1675 aaKnown RBP11.64□□□□□ -0.55
NECTIN3-210ENST00000491525 RNF17Q9BXT8 1623 aaKnown RBP11.64□□□□□ -0.55
NECTIN3-210ENST00000491525 EIF2AK4Q9P2K8 1649 aaKnown RBP11.64□□□□□ -0.55
NECTIN3-210ENST00000491525 NPATQ14207 1427 aa11.63□□□□□ -0.55
NECTIN3-210ENST00000491525 GGT6Q6P531 493 aa11.63□□□□□ -0.55
NECTIN3-210ENST00000491525 RBM33Q96EV2 1170 aaKnown RBP11.63□□□□□ -0.55
NECTIN3-210ENST00000491525 NBPF3Q9H094 633 aa11.63□□□□□ -0.55
NECTIN3-210ENST00000491525 KDM5DQ9BY66 1539 aa11.63□□□□□ -0.55
NECTIN3-210ENST00000491525 ZMYM3Q14202 1370 aa11.63□□□□□ -0.55
NECTIN3-210ENST00000491525 DUOX2Q9NRD8 1548 aa11.62□□□□□ -0.55
NECTIN3-210ENST00000491525 MROH1Q8NDA8 1641 aa11.62□□□□□ -0.55
NECTIN3-210ENST00000491525 KIF3BO15066 747 aa11.62□□□□□ -0.55
NECTIN3-210ENST00000491525 NBR1Q14596 966 aa11.62□□□□□ -0.55
NECTIN3-210ENST00000491525 C6orf132Q5T0Z8 1188 aa11.62□□□□□ -0.55
NECTIN3-210ENST00000491525 KCTD12Q96CX2 325 aaKnown RBP11.62□□□□□ -0.55
NECTIN3-210ENST00000491525 ESF1Q9H501 851 aaKnown RBP11.62□□□□□ -0.55
NECTIN3-210ENST00000491525 KIF15Q9NS87 1388 aa11.62□□□□□ -0.55
NECTIN3-210ENST00000491525 UHRF1BP1Q6BDS2 1440 aa11.61□□□□□ -0.55
NECTIN3-210ENST00000491525 MRPL50Q8N5N7 158 aaKnown RBP11.61□□□□□ -0.55
NECTIN3-210ENST00000491525 ADGRL2O95490 1459 aa11.61□□□□□ -0.55
NECTIN3-210ENST00000491525 PTPRKQ15262 1439 aa11.6□□□□□ -0.55
NECTIN3-210ENST00000491525 ERBINQ96RT1 1412 aa11.6□□□□□ -0.55
NECTIN3-210ENST00000491525 HSPA2P54652 639 aa11.6□□□□□ -0.55
NECTIN3-210ENST00000491525 MAP3K7O43318 606 aa11.59□□□□□ -0.55
NECTIN3-210ENST00000491525 SETD1BQ9UPS6 1966 aaKnown RBP11.58□□□□□ -0.56
NECTIN3-210ENST00000491525 GRXCR2A6NFK2 248 aa11.58□□□□□ -0.56
NECTIN3-210ENST00000491525 BHMG1C9JSJ3 638 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms