RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 MYOM2P54296 1465 aa12.72□□□□□ -0.37
APOBEC3F-204ENST00000491387 SPATA31E1Q6ZUB1 1445 aa12.71□□□□□ -0.37
APOBEC3F-204ENST00000491387 ANKRD30BQ9BXX2 1392 aa12.71□□□□□ -0.37
APOBEC3F-204ENST00000491387 NPHP3Q7Z494 1330 aa12.71□□□□□ -0.37
APOBEC3F-204ENST00000491387 ABCC11Q96J66 1382 aa12.7□□□□□ -0.38
APOBEC3F-204ENST00000491387 ADAMTS2O95450 1211 aa12.7□□□□□ -0.38
APOBEC3F-204ENST00000491387 TRPC5Q9UL62 973 aaPredicted RBP12.7□□□□□ -0.38
APOBEC3F-204ENST00000491387 IFT172Q9UG01 1749 aa12.7□□□□□ -0.38
APOBEC3F-204ENST00000491387 PXDNQ92626 1479 aa12.7□□□□□ -0.38
APOBEC3F-204ENST00000491387 ATRNO75882 1429 aa12.7□□□□□ -0.38
APOBEC3F-204ENST00000491387 LRPPRCP42704 1394 aaKnown RBP12.69□□□□□ -0.38
APOBEC3F-204ENST00000491387 ADGRF5Q8IZF2 1346 aa12.69□□□□□ -0.38
APOBEC3F-204ENST00000491387 USP21Q9UK80 565 aa12.69□□□□□ -0.38
APOBEC3F-204ENST00000491387 CCDC144AA2RUR9 1427 aa12.69□□□□□ -0.38
APOBEC3F-204ENST00000491387 SIRT1Q96EB6 747 aa12.68□□□□□ -0.38
APOBEC3F-204ENST00000491387 ATAD2Q6PL18 1390 aa12.68□□□□□ -0.38
APOBEC3F-204ENST00000491387 ACIN1Q9UKV3 1341 aaKnown RBP12.67□□□□□ -0.38
APOBEC3F-204ENST00000491387 ESCO1Q5FWF5 840 aa12.67□□□□□ -0.38
APOBEC3F-204ENST00000491387 KNDC1Q76NI1 1749 aa12.67□□□□□ -0.38
APOBEC3F-204ENST00000491387 BCL9LQ86UU0 1499 aa12.66□□□□□ -0.38
APOBEC3F-204ENST00000491387 PIK3C2GO75747 1445 aa12.66□□□□□ -0.38
APOBEC3F-204ENST00000491387 FOXO3O43524 673 aa12.65□□□□□ -0.38
APOBEC3F-204ENST00000491387 FOXD1Q16676 465 aa12.65□□□□□ -0.38
APOBEC3F-204ENST00000491387 MPHOSPH9Q99550 1183 aa12.65□□□□□ -0.38
APOBEC3F-204ENST00000491387 MARF1Q9Y4F3 1742 aaKnown RBP12.65□□□□□ -0.38
APOBEC3F-204ENST00000491387 WAPLQ7Z5K2 1190 aa12.64□□□□□ -0.39
APOBEC3F-204ENST00000491387 NRXN1Q9ULB1 1477 aa12.64□□□□□ -0.39
APOBEC3F-204ENST00000491387 CCDC125Q86Z20 511 aa12.63□□□□□ -0.39
APOBEC3F-204ENST00000491387 SPATA31A3Q5VYP0 1347 aa12.62□□□□□ -0.39
APOBEC3F-204ENST00000491387 YTHDC2Q9H6S0 1430 aaKnown RBP12.62□□□□□ -0.39
APOBEC3F-204ENST00000491387 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.62□□□□□ -0.39
APOBEC3F-204ENST00000491387 FMN2Q9NZ56 1722 aa12.62□□□□□ -0.39
APOBEC3F-204ENST00000491387 KIF1AQ12756 1690 aa12.62□□□□□ -0.39
APOBEC3F-204ENST00000491387 PLEKHH1Q9ULM0 1364 aa12.62□□□□□ -0.39
APOBEC3F-204ENST00000491387 RGL3Q3MIN7 710 aa12.62□□□□□ -0.39
APOBEC3F-204ENST00000491387 C14orf93Q9H972 538 aaKnown RBP12.62□□□□□ -0.39
APOBEC3F-204ENST00000491387 TMEM132EQ6IEE7 984 aa12.61□□□□□ -0.39
APOBEC3F-204ENST00000491387 GJD4Q96KN9 370 aaPredicted RBP12.61□□□□□ -0.39
APOBEC3F-204ENST00000491387 STK26Q9P289 416 aa12.61□□□□□ -0.39
APOBEC3F-204ENST00000491387 SLIT2O94813 1529 aa12.61□□□□□ -0.39
APOBEC3F-204ENST00000491387 XPCQ01831 940 aaPredicted RBP12.6□□□□□ -0.39
APOBEC3F-204ENST00000491387 EP400Q96L91 3159 aa12.59□□□□□ -0.39
APOBEC3F-204ENST00000491387 UNC5CLQ8IV45 518 aa12.59□□□□□ -0.39
APOBEC3F-204ENST00000491387 KRT28Q7Z3Y7 464 aa12.58□□□□□ -0.4
APOBEC3F-204ENST00000491387 SRCAPQ6ZRS2 3230 aa12.58□□□□□ -0.4
APOBEC3F-204ENST00000491387 DLC1Q96QB1 1528 aa12.57□□□□□ -0.4
APOBEC3F-204ENST00000491387 SBNO1A3KN83 1393 aa12.57□□□□□ -0.4
APOBEC3F-204ENST00000491387 DHX57Q6P158 1386 aaKnown RBP12.57□□□□□ -0.4
APOBEC3F-204ENST00000491387 NUTM2FA1L443 756 aa12.57□□□□□ -0.4
APOBEC3F-204ENST00000491387 USP32Q8NFA0 1604 aa12.57□□□□□ -0.4
APOBEC3F-204ENST00000491387 RALGAPBQ86X10 1494 aa12.57□□□□□ -0.4
APOBEC3F-204ENST00000491387 GLI3P10071 1580 aa12.56□□□□□ -0.4
APOBEC3F-204ENST00000491387 TNS3Q68CZ2 1445 aa12.56□□□□□ -0.4
APOBEC3F-204ENST00000491387 ONECUT3O60422 494 aaPredicted RBP12.56□□□□□ -0.4
APOBEC3F-204ENST00000491387 PSME1Q06323 249 aa12.56□□□□□ -0.4
APOBEC3F-204ENST00000491387 PHF8Q9UPP1 1060 aa12.56□□□□□ -0.4
APOBEC3F-204ENST00000491387 RGPD8O14715 1765 aaPredicted RBP12.56□□□□□ -0.4
APOBEC3F-204ENST00000491387 ANKARQ7Z5J8 1434 aa12.55□□□□□ -0.4
APOBEC3F-204ENST00000491387 CFAP70Q5T0N1 1121 aa12.55□□□□□ -0.4
APOBEC3F-204ENST00000491387 VPS72Q15906 364 aa12.54□□□□□ -0.4
APOBEC3F-204ENST00000491387 ZRANB1Q9UGI0 708 aa12.54□□□□□ -0.4
APOBEC3F-204ENST00000491387 ARHGEF10O15013 1369 aa12.54□□□□□ -0.4
APOBEC3F-204ENST00000491387 NWD2Q9ULI1 1742 aa12.54□□□□□ -0.4
APOBEC3F-204ENST00000491387 BLMP54132 1417 aaPredicted RBP12.54□□□□□ -0.4
APOBEC3F-204ENST00000491387 ADGRB1O14514 1584 aa12.53□□□□□ -0.4
APOBEC3F-204ENST00000491387 ADGRB2O60241 1585 aa12.53□□□□□ -0.4
APOBEC3F-204ENST00000491387 STAC3Q96MF2 364 aa12.52□□□□□ -0.41
APOBEC3F-204ENST00000491387 PRAM1Q96QH2 718 aa12.52□□□□□ -0.41
APOBEC3F-204ENST00000491387 ABCA3Q99758 1704 aa12.51□□□□□ -0.41
APOBEC3F-204ENST00000491387 SEPT12Q8IYM1 358 aa12.5□□□□□ -0.41
APOBEC3F-204ENST00000491387 BRWD3Q6RI45 1802 aa12.5□□□□□ -0.41
APOBEC3F-204ENST00000491387 PLCH1Q4KWH8 1693 aa12.49□□□□□ -0.41
APOBEC3F-204ENST00000491387 EIF3AQ14152 1382 aaKnown RBP12.49□□□□□ -0.41
APOBEC3F-204ENST00000491387 FAM83GA6ND36 823 aa12.49□□□□□ -0.41
APOBEC3F-204ENST00000491387 CABLES1Q8TDN4 633 aa12.49□□□□□ -0.41
APOBEC3F-204ENST00000491387 TRPM3Q9HCF6 1732 aaPredicted RBP12.48□□□□□ -0.41
APOBEC3F-204ENST00000491387 POGKQ9P215 609 aa12.48□□□□□ -0.41
APOBEC3F-204ENST00000491387 RAB3GAP2Q9H2M9 1393 aa12.47□□□□□ -0.41
APOBEC3F-204ENST00000491387 HRCP23327 699 aa12.47□□□□□ -0.41
APOBEC3F-204ENST00000491387 HAP1P54257 671 aaPredicted RBP12.47□□□□□ -0.41
APOBEC3F-204ENST00000491387 ALS2Q96Q42 1657 aa12.47□□□□□ -0.41
APOBEC3F-204ENST00000491387 TULP4Q9NRJ4 1543 aa12.47□□□□□ -0.41
APOBEC3F-204ENST00000491387 PRR36Q9H6K5 1346 aa12.46□□□□□ -0.41
APOBEC3F-204ENST00000491387 SAFB2Q14151 953 aaKnown RBP eCLIP12.46□□□□□ -0.41
APOBEC3F-204ENST00000491387 KRT27Q7Z3Y8 459 aa12.46□□□□□ -0.41
APOBEC3F-204ENST00000491387 PMFBP1Q8TBY8 1022 aa12.46□□□□□ -0.41
APOBEC3F-204ENST00000491387 GPRASP1Q5JY77 1395 aa12.45□□□□□ -0.42
APOBEC3F-204ENST00000491387 WASLO00401 505 aaPredicted RBP12.45□□□□□ -0.42
APOBEC3F-204ENST00000491387 NRAPQ86VF7 1730 aa12.45□□□□□ -0.42
APOBEC3F-204ENST00000491387 COL14A1Q05707 1796 aaKnown RBP12.44□□□□□ -0.42
APOBEC3F-204ENST00000491387 LMOD2Q6P5Q4 547 aa12.44□□□□□ -0.42
APOBEC3F-204ENST00000491387 DEFB132Q7Z7B7 95 aa12.44□□□□□ -0.42
APOBEC3F-204ENST00000491387 TRAK1Q9UPV9 953 aa12.44□□□□□ -0.42
APOBEC3F-204ENST00000491387 SF3B2Q13435 895 aaKnown RBP12.43□□□□□ -0.42
APOBEC3F-204ENST00000491387 CRYBG1Q9Y4K1 1723 aa12.42□□□□□ -0.42
APOBEC3F-204ENST00000491387 MINK1Q8N4C8 1332 aaPredicted RBP12.42□□□□□ -0.42
APOBEC3F-204ENST00000491387 DCAF11Q8TEB1 546 aa12.42□□□□□ -0.42
APOBEC3F-204ENST00000491387 HIRIP3Q9BW71 556 aaPredicted RBP12.42□□□□□ -0.42
APOBEC3F-204ENST00000491387 BTG4Q9NY30 223 aa12.42□□□□□ -0.42
APOBEC3F-204ENST00000491387 SPATA31A5Q5VU36 1347 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms