RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 SPATA31A6Q5VVP1 1343 aa12.68□□□□□ -0.38
GABRE-211ENST00000491339 DHX57Q6P158 1386 aaKnown RBP12.67□□□□□ -0.38
GABRE-211ENST00000491339 STK26Q9P289 416 aa12.67□□□□□ -0.38
GABRE-211ENST00000491339 DLC1Q96QB1 1528 aa12.67□□□□□ -0.38
GABRE-211ENST00000491339 SOCS7O14512 581 aa12.66□□□□□ -0.38
GABRE-211ENST00000491339 KIAA1210Q9ULL0 1709 aa12.65□□□□□ -0.38
GABRE-211ENST00000491339 STAC3Q96MF2 364 aa12.65□□□□□ -0.39
GABRE-211ENST00000491339 RNF39Q9H2S5 420 aa12.65□□□□□ -0.39
GABRE-211ENST00000491339 C14orf93Q9H972 538 aaKnown RBP12.65□□□□□ -0.39
GABRE-211ENST00000491339 LRP6O75581 1613 aa12.64□□□□□ -0.39
GABRE-211ENST00000491339 ADGRB1O14514 1584 aa12.64□□□□□ -0.39
GABRE-211ENST00000491339 ADGRB2O60241 1585 aa12.64□□□□□ -0.39
GABRE-211ENST00000491339 MEX3CQ5U5Q3 659 aaKnown RBP12.64□□□□□ -0.39
GABRE-211ENST00000491339 TMEM132EQ6IEE7 984 aa12.64□□□□□ -0.39
GABRE-211ENST00000491339 PLSCR2Q9NRY7 297 aa12.64□□□□□ -0.39
GABRE-211ENST00000491339 ARHGEF28Q8N1W1 1705 aaKnown RBP12.63□□□□□ -0.39
GABRE-211ENST00000491339 CFAP70Q5T0N1 1121 aa12.62□□□□□ -0.39
GABRE-211ENST00000491339 DCAF11Q8TEB1 546 aa12.62□□□□□ -0.39
GABRE-211ENST00000491339 LRRC59Q96AG4 307 aaKnown RBP12.62□□□□□ -0.39
GABRE-211ENST00000491339 RGPD8O14715 1765 aaPredicted RBP12.62□□□□□ -0.39
GABRE-211ENST00000491339 COL22A1Q8NFW1 1626 aaPredicted RBP12.62□□□□□ -0.39
GABRE-211ENST00000491339 PLEKHH1Q9ULM0 1364 aa12.61□□□□□ -0.39
GABRE-211ENST00000491339 WAPLQ7Z5K2 1190 aa12.61□□□□□ -0.39
GABRE-211ENST00000491339 SIRT1Q96EB6 747 aa12.6□□□□□ -0.39
GABRE-211ENST00000491339 KDM2AQ9Y2K7 1162 aa12.6□□□□□ -0.39
GABRE-211ENST00000491339 NPHP3Q7Z494 1330 aa12.6□□□□□ -0.39
GABRE-211ENST00000491339 ITSN1Q15811 1721 aa12.6□□□□□ -0.39
GABRE-211ENST00000491339 PNPLA6Q8IY17 1366 aa12.6□□□□□ -0.39
GABRE-211ENST00000491339 EIF3AQ14152 1382 aaKnown RBP12.59□□□□□ -0.39
GABRE-211ENST00000491339 MARF1Q9Y4F3 1742 aaKnown RBP12.58□□□□□ -0.39
GABRE-211ENST00000491339 ESCO1Q5FWF5 840 aa12.58□□□□□ -0.39
GABRE-211ENST00000491339 ORAI2Q96SN7 254 aa12.58□□□□□ -0.39
GABRE-211ENST00000491339 POGKQ9P215 609 aa12.58□□□□□ -0.39
GABRE-211ENST00000491339 PRAM1Q96QH2 718 aa12.58□□□□□ -0.4
GABRE-211ENST00000491339 PXDNQ92626 1479 aa12.58□□□□□ -0.4
GABRE-211ENST00000491339 NUTM2BA6NNL0 878 aaPredicted RBP12.57□□□□□ -0.4
GABRE-211ENST00000491339 NUTM2EB1AL46 878 aaPredicted RBP12.57□□□□□ -0.4
GABRE-211ENST00000491339 NUTM2AQ8IVF1 878 aaPredicted RBP12.57□□□□□ -0.4
GABRE-211ENST00000491339 DDX17Q92841 729 aaKnown RBP12.57□□□□□ -0.4
GABRE-211ENST00000491339 SOS2Q07890 1332 aaPredicted RBP12.57□□□□□ -0.4
GABRE-211ENST00000491339 ANKARQ7Z5J8 1434 aa12.57□□□□□ -0.4
GABRE-211ENST00000491339 RGS17Q9UGC6 210 aaPredicted RBP12.57□□□□□ -0.4
GABRE-211ENST00000491339 ZNF772Q68DY9 489 aaPredicted RBP12.56□□□□□ -0.4
GABRE-211ENST00000491339 USP32Q8NFA0 1604 aa12.56□□□□□ -0.4
GABRE-211ENST00000491339 TULP4Q9NRJ4 1543 aa12.56□□□□□ -0.4
GABRE-211ENST00000491339 NUTM2FA1L443 756 aa12.55□□□□□ -0.4
GABRE-211ENST00000491339 SAFB2Q14151 953 aaKnown RBP eCLIP12.55□□□□□ -0.4
GABRE-211ENST00000491339 TRAK1Q9UPV9 953 aa12.55□□□□□ -0.4
GABRE-211ENST00000491339 POTEAQ6S8J7 498 aa12.53□□□□□ -0.4
GABRE-211ENST00000491339 ABCA3Q99758 1704 aa12.53□□□□□ -0.4
GABRE-211ENST00000491339 QRICH2Q9H0J4 1663 aa12.53□□□□□ -0.4
GABRE-211ENST00000491339 TRPM1Q7Z4N2 1603 aa12.53□□□□□ -0.4
GABRE-211ENST00000491339 FOXO3O43524 673 aa12.52□□□□□ -0.41
GABRE-211ENST00000491339 TNS3Q68CZ2 1445 aa12.51□□□□□ -0.41
GABRE-211ENST00000491339 AFF2P51816 1311 aa12.51□□□□□ -0.41
GABRE-211ENST00000491339 TOPAZ1Q8N9V7 1692 aa12.51□□□□□ -0.41
GABRE-211ENST00000491339 MINK1Q8N4C8 1332 aaPredicted RBP12.51□□□□□ -0.41
GABRE-211ENST00000491339 C8orf37Q96NL8 207 aa12.5□□□□□ -0.41
GABRE-211ENST00000491339 PHF8Q9UPP1 1060 aa12.5□□□□□ -0.41
GABRE-211ENST00000491339 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.5□□□□□ -0.41
GABRE-211ENST00000491339 TRPM3Q9HCF6 1732 aaPredicted RBP12.5□□□□□ -0.41
GABRE-211ENST00000491339 XPCQ01831 940 aaPredicted RBP12.5□□□□□ -0.41
GABRE-211ENST00000491339 CDK12Q9NYV4 1490 aaPredicted RBP12.49□□□□□ -0.41
GABRE-211ENST00000491339 PSME1Q06323 249 aa12.49□□□□□ -0.41
GABRE-211ENST00000491339 HIRIP3Q9BW71 556 aaPredicted RBP12.49□□□□□ -0.41
GABRE-211ENST00000491339 ADAMTS2O95450 1211 aa12.49□□□□□ -0.41
GABRE-211ENST00000491339 ALS2Q96Q42 1657 aa12.48□□□□□ -0.41
GABRE-211ENST00000491339 ARHGEF10O15013 1369 aa12.48□□□□□ -0.41
GABRE-211ENST00000491339 ATP7BP35670 1465 aa12.48□□□□□ -0.41
GABRE-211ENST00000491339 SBNO1A3KN83 1393 aa12.47□□□□□ -0.41
GABRE-211ENST00000491339 SPATA31A3Q5VYP0 1347 aa12.47□□□□□ -0.41
GABRE-211ENST00000491339 PLCH1Q4KWH8 1693 aa12.47□□□□□ -0.41
GABRE-211ENST00000491339 WASLO00401 505 aaPredicted RBP12.47□□□□□ -0.41
GABRE-211ENST00000491339 TRIM26Q12899 539 aaPredicted RBP12.47□□□□□ -0.41
GABRE-211ENST00000491339 KRT28Q7Z3Y7 464 aa12.47□□□□□ -0.41
GABRE-211ENST00000491339 NGLY1Q96IV0 654 aa12.47□□□□□ -0.41
GABRE-211ENST00000491339 GPRASP1Q5JY77 1395 aa12.47□□□□□ -0.41
GABRE-211ENST00000491339 NWD2Q9ULI1 1742 aa12.46□□□□□ -0.42
GABRE-211ENST00000491339 RXRBP28702 533 aa12.46□□□□□ -0.42
GABRE-211ENST00000491339 HAP1P54257 671 aaPredicted RBP12.46□□□□□ -0.42
GABRE-211ENST00000491339 NEUROD1Q13562 356 aa12.45□□□□□ -0.42
GABRE-211ENST00000491339 C1QBPQ07021 282 aaKnown RBP12.44□□□□□ -0.42
GABRE-211ENST00000491339 PMFBP1Q8TBY8 1022 aa12.44□□□□□ -0.42
GABRE-211ENST00000491339 L3MBTL2Q969R5 705 aa12.44□□□□□ -0.42
GABRE-211ENST00000491339 ROCK2O75116 1388 aaKnown RBP12.44□□□□□ -0.42
GABRE-211ENST00000491339 SIN3AQ96ST3 1273 aa12.44□□□□□ -0.42
GABRE-211ENST00000491339 CRYBG1Q9Y4K1 1723 aa12.44□□□□□ -0.42
GABRE-211ENST00000491339 CENPJQ9HC77 1338 aaPredicted RBP12.43□□□□□ -0.42
GABRE-211ENST00000491339 TONSLQ96HA7 1378 aa12.43□□□□□ -0.42
GABRE-211ENST00000491339 LMOD2Q6P5Q4 547 aa12.43□□□□□ -0.42
GABRE-211ENST00000491339 USP21Q9UK80 565 aa12.43□□□□□ -0.42
GABRE-211ENST00000491339 PRR36Q9H6K5 1346 aa12.43□□□□□ -0.42
GABRE-211ENST00000491339 RGS12O14924 1447 aa12.42□□□□□ -0.42
GABRE-211ENST00000491339 PHRF1Q9P1Y6 1649 aaKnown RBP12.42□□□□□ -0.42
GABRE-211ENST00000491339 RBM6P78332 1123 aaKnown RBP12.42□□□□□ -0.42
GABRE-211ENST00000491339 NBPF1Q3BBV0 1214 aa12.42□□□□□ -0.42
GABRE-211ENST00000491339 NGDNQ8NEJ9 315 aaKnown RBP12.42□□□□□ -0.42
GABRE-211ENST00000491339 TRPC5Q9UL62 973 aaPredicted RBP12.42□□□□□ -0.42
GABRE-211ENST00000491339 ATRNO75882 1429 aa12.41□□□□□ -0.42
GABRE-211ENST00000491339 QTRT2Q9H974 415 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms