RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 UHRF1BP1Q6BDS2 1440 aa12.16□□□□□ -0.46
ERCC3-208ENST00000491292 TRIM27P14373 513 aa12.16□□□□□ -0.46
ERCC3-208ENST00000491292 CCDC173Q0VFZ6 552 aa12.16□□□□□ -0.46
ERCC3-208ENST00000491292 GGT6Q6P531 493 aa12.16□□□□□ -0.46
ERCC3-208ENST00000491292 ZSCAN30Q86W11 494 aa12.16□□□□□ -0.46
ERCC3-208ENST00000491292 KIF14Q15058 1648 aa12.16□□□□□ -0.46
ERCC3-208ENST00000491292 NUP153P49790 1475 aaKnown RBP12.16□□□□□ -0.46
ERCC3-208ENST00000491292 CASC1Q6TDU7 716 aa12.16□□□□□ -0.46
ERCC3-208ENST00000491292 ATF7IPQ6VMQ6 1270 aa12.16□□□□□ -0.46
ERCC3-208ENST00000491292 UQCRHLA0A096LP55 91 aa12.15□□□□□ -0.46
ERCC3-208ENST00000491292 UQCRHP07919 91 aa12.15□□□□□ -0.46
ERCC3-208ENST00000491292 CARD14Q9BXL6 1004 aa12.15□□□□□ -0.46
ERCC3-208ENST00000491292 K7ELQ4 463 aaPredicted RBP12.15□□□□□ -0.46
ERCC3-208ENST00000491292 AFAP1Q8N556 730 aa12.15□□□□□ -0.46
ERCC3-208ENST00000491292 RBM27Q9P2N5 1060 aaKnown RBP12.15□□□□□ -0.46
ERCC3-208ENST00000491292 RSPH4AQ5TD94 716 aa12.15□□□□□ -0.47
ERCC3-208ENST00000491292 PTMSP20962 102 aa12.14□□□□□ -0.47
ERCC3-208ENST00000491292 CHD1LQ86WJ1 897 aa12.14□□□□□ -0.47
ERCC3-208ENST00000491292 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.14□□□□□ -0.47
ERCC3-208ENST00000491292 CABP2Q9NPB3 220 aa12.14□□□□□ -0.47
ERCC3-208ENST00000491292 ZNF521Q96K83 1311 aa12.14□□□□□ -0.47
ERCC3-208ENST00000491292 FSD2A1L4K1 749 aa12.14□□□□□ -0.47
ERCC3-208ENST00000491292 SOX12O15370 315 aa12.14□□□□□ -0.47
ERCC3-208ENST00000491292 DNMT1P26358 1616 aaKnown RBP12.14□□□□□ -0.47
ERCC3-208ENST00000491292 THUMPD2Q9BTF0 503 aaKnown RBP12.14□□□□□ -0.47
ERCC3-208ENST00000491292 HMOX1P09601 288 aa12.13□□□□□ -0.47
ERCC3-208ENST00000491292 SPAG9O60271 1321 aaKnown RBP12.13□□□□□ -0.47
ERCC3-208ENST00000491292 NGEFQ8N5V2 710 aa12.13□□□□□ -0.47
ERCC3-208ENST00000491292 PDCL3Q9H2J4 239 aa12.13□□□□□ -0.47
ERCC3-208ENST00000491292 ZHX1Q9UKY1 873 aaPredicted RBP12.13□□□□□ -0.47
ERCC3-208ENST00000491292 SAMD9Q5K651 1589 aa12.13□□□□□ -0.47
ERCC3-208ENST00000491292 NPM1P06748 294 aaKnown RBP eCLIP12.13□□□□□ -0.47
ERCC3-208ENST00000491292 EFCAB2Q5VUJ9 269 aa12.12□□□□□ -0.47
ERCC3-208ENST00000491292 WDR63Q8IWG1 891 aa12.12□□□□□ -0.47
ERCC3-208ENST00000491292 GAS2L2Q8NHY3 880 aa12.12□□□□□ -0.47
ERCC3-208ENST00000491292 MBD5Q9P267 1494 aa12.12□□□□□ -0.47
ERCC3-208ENST00000491292 COL17A1Q9UMD9 1497 aaPredicted RBP12.12□□□□□ -0.47
ERCC3-208ENST00000491292 PODXL2Q9NZ53 605 aa12.12□□□□□ -0.47
ERCC3-208ENST00000491292 LRRIQ1Q96JM4 1722 aa12.11□□□□□ -0.47
ERCC3-208ENST00000491292 ABCA5Q8WWZ7 1642 aa12.11□□□□□ -0.47
ERCC3-208ENST00000491292 SYCE3A1L190 88 aa12.11□□□□□ -0.47
ERCC3-208ENST00000491292 KIAA2012Q0VF49 1180 aa12.11□□□□□ -0.47
ERCC3-208ENST00000491292 STAG3Q9UJ98 1225 aa12.11□□□□□ -0.47
ERCC3-208ENST00000491292 CHAMP1Q96JM3 812 aa12.11□□□□□ -0.47
ERCC3-208ENST00000491292 WDR62O43379 1518 aa12.11□□□□□ -0.47
ERCC3-208ENST00000491292 ST18O60284 1047 aa12.1□□□□□ -0.47
ERCC3-208ENST00000491292 BAG4O95429 457 aaKnown RBP12.1□□□□□ -0.47
ERCC3-208ENST00000491292 SLC4A10Q6U841 1118 aa12.1□□□□□ -0.47
ERCC3-208ENST00000491292 MAGI2Q86UL8 1455 aa12.1□□□□□ -0.47
ERCC3-208ENST00000491292 AAMPQ13685 434 aa12.09□□□□□ -0.47
ERCC3-208ENST00000491292 TRMT2AQ8IZ69 625 aaKnown RBP12.09□□□□□ -0.47
ERCC3-208ENST00000491292 NSD3Q9BZ95 1437 aa12.09□□□□□ -0.47
ERCC3-208ENST00000491292 TBC1D9Q6ZT07 1266 aa12.09□□□□□ -0.47
ERCC3-208ENST00000491292 NINLQ9Y2I6 1382 aa12.09□□□□□ -0.47
ERCC3-208ENST00000491292 ADGRF5Q8IZF2 1346 aa12.09□□□□□ -0.47
ERCC3-208ENST00000491292 CD2BP2O95400 341 aaKnown RBP12.08□□□□□ -0.47
ERCC3-208ENST00000491292 ISY1Q9ULR0 285 aaKnown RBP12.08□□□□□ -0.47
ERCC3-208ENST00000491292 A2MP01023 1474 aa12.08□□□□□ -0.48
ERCC3-208ENST00000491292 TRIM6-TRIM34B2RNG4 842 aa12.08□□□□□ -0.48
ERCC3-208ENST00000491292 CDC45O75419 566 aa12.08□□□□□ -0.48
ERCC3-208ENST00000491292 FBLN1P23142 703 aa12.08□□□□□ -0.48
ERCC3-208ENST00000491292 NUCB2P80303 420 aa12.08□□□□□ -0.48
ERCC3-208ENST00000491292 KANK1Q14678 1352 aa12.08□□□□□ -0.48
ERCC3-208ENST00000491292 PTPRGP23470 1445 aa12.08□□□□□ -0.48
ERCC3-208ENST00000491292 FAM177BA6PVY3 158 aa12.08□□□□□ -0.48
ERCC3-208ENST00000491292 CIZ1Q9ULV3 898 aaPredicted RBP12.08□□□□□ -0.48
ERCC3-208ENST00000491292 CHMP3Q9Y3E7 222 aa12.08□□□□□ -0.48
ERCC3-208ENST00000491292 GPRASP1Q5JY77 1395 aa12.08□□□□□ -0.48
ERCC3-208ENST00000491292 MINK1Q8N4C8 1332 aaPredicted RBP12.08□□□□□ -0.48
ERCC3-208ENST00000491292 TMPOP42166 694 aaKnown RBP12.07□□□□□ -0.48
ERCC3-208ENST00000491292 RILPL2Q969X0 211 aa12.07□□□□□ -0.48
ERCC3-208ENST00000491292 ZNF830Q96NB3 372 aaPredicted RBP12.07□□□□□ -0.48
ERCC3-208ENST00000491292 PRIM1P49642 420 aaKnown RBP12.07□□□□□ -0.48
ERCC3-208ENST00000491292 RAB3GAP1Q15042 981 aa12.07□□□□□ -0.48
ERCC3-208ENST00000491292 KIF16BQ96L93 1317 aa12.06□□□□□ -0.48
ERCC3-208ENST00000491292 NEK4P51957 841 aa12.06□□□□□ -0.48
ERCC3-208ENST00000491292 CHMP4BQ9H444 224 aaKnown RBP12.06□□□□□ -0.48
ERCC3-208ENST00000491292 GDPD2Q9HCC8 539 aa12.06□□□□□ -0.48
ERCC3-208ENST00000491292 ARHGEF12Q9NZN5 1544 aa12.06□□□□□ -0.48
ERCC3-208ENST00000491292 SMARCA5O60264 1052 aaPredicted RBP12.06□□□□□ -0.48
ERCC3-208ENST00000491292 TSC1Q92574 1164 aa12.06□□□□□ -0.48
ERCC3-208ENST00000491292 DIAPH1O60610 1272 aaKnown RBP12.05□□□□□ -0.48
ERCC3-208ENST00000491292 ZSCAN23Q3MJ62 389 aa12.05□□□□□ -0.48
ERCC3-208ENST00000491292 ASXL1Q8IXJ9 1541 aa12.05□□□□□ -0.48
ERCC3-208ENST00000491292 DRC7Q8IY82 874 aa12.05□□□□□ -0.48
ERCC3-208ENST00000491292 FAM135AQ9P2D6 1515 aa12.05□□□□□ -0.48
ERCC3-208ENST00000491292 CBX1P83916 185 aa12.05□□□□□ -0.48
ERCC3-208ENST00000491292 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.04□□□□□ -0.48
ERCC3-208ENST00000491292 PLEKHG5O94827 1062 aa12.04□□□□□ -0.48
ERCC3-208ENST00000491292 PRKAR2BP31323 418 aa12.04□□□□□ -0.48
ERCC3-208ENST00000491292 RBSNQ9H1K0 784 aa12.04□□□□□ -0.48
ERCC3-208ENST00000491292 MAGI1Q96QZ7 1491 aaPredicted RBP12.04□□□□□ -0.48
ERCC3-208ENST00000491292 C16orf71Q8IYS4 520 aaPredicted RBP12.04□□□□□ -0.48
ERCC3-208ENST00000491292 ZGPATQ8N5A5 531 aaKnown RBP12.04□□□□□ -0.48
ERCC3-208ENST00000491292 ARHGAP5Q13017 1502 aa12.04□□□□□ -0.48
ERCC3-208ENST00000491292 OFD1O75665 1012 aa12.04□□□□□ -0.48
ERCC3-208ENST00000491292 PKP1Q13835 747 aa12.04□□□□□ -0.48
ERCC3-208ENST00000491292 KLHL40Q2TBA0 621 aa12.04□□□□□ -0.48
ERCC3-208ENST00000491292 SMC5Q8IY18 1101 aa12.04□□□□□ -0.48
ERCC3-208ENST00000491292 CHAF1AQ13111 956 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms