RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 PPLO60437 1756 aa19.52■□□□□ 0.72
DNMT3A-214ENST00000491288 CDK12Q9NYV4 1490 aaPredicted RBP19.52■□□□□ 0.72
DNMT3A-214ENST00000491288 NUTM2BA6NNL0 878 aaPredicted RBP19.51■□□□□ 0.71
DNMT3A-214ENST00000491288 NUTM2EB1AL46 878 aaPredicted RBP19.51■□□□□ 0.71
DNMT3A-214ENST00000491288 RXRBP28702 533 aa19.51■□□□□ 0.71
DNMT3A-214ENST00000491288 NUTM2AQ8IVF1 878 aaPredicted RBP19.51■□□□□ 0.71
DNMT3A-214ENST00000491288 ORAI2Q96SN7 254 aa19.5■□□□□ 0.71
DNMT3A-214ENST00000491288 AFF2P51816 1311 aa19.5■□□□□ 0.71
DNMT3A-214ENST00000491288 UPF1Q92900 1129 aaKnown RBP eCLIP19.49■□□□□ 0.71
DNMT3A-214ENST00000491288 TECPR2O15040 1411 aa19.48■□□□□ 0.71
DNMT3A-214ENST00000491288 IFT172Q9UG01 1749 aa19.45■□□□□ 0.7
DNMT3A-214ENST00000491288 C14orf93Q9H972 538 aaKnown RBP19.44■□□□□ 0.7
DNMT3A-214ENST00000491288 ABCC11Q96J66 1382 aa19.44■□□□□ 0.7
DNMT3A-214ENST00000491288 CCER1Q8TC90 406 aaPredicted RBP19.43■□□□□ 0.7
DNMT3A-214ENST00000491288 C8orf37Q96NL8 207 aa19.43■□□□□ 0.7
DNMT3A-214ENST00000491288 CDC42BPGQ6DT37 1551 aa19.43■□□□□ 0.7
DNMT3A-214ENST00000491288 LRPPRCP42704 1394 aaKnown RBP19.43■□□□□ 0.7
DNMT3A-214ENST00000491288 MYOM2P54296 1465 aa19.42■□□□□ 0.7
DNMT3A-214ENST00000491288 RBM6P78332 1123 aaKnown RBP19.42■□□□□ 0.7
DNMT3A-214ENST00000491288 CFAP70Q5T0N1 1121 aa19.42■□□□□ 0.7
DNMT3A-214ENST00000491288 L3MBTL2Q969R5 705 aa19.42■□□□□ 0.7
DNMT3A-214ENST00000491288 QTRT2Q9H974 415 aaKnown RBP19.42■□□□□ 0.7
DNMT3A-214ENST00000491288 PIK3C2GO75747 1445 aa19.42■□□□□ 0.7
DNMT3A-214ENST00000491288 TMEM132EQ6IEE7 984 aa19.4■□□□□ 0.7
DNMT3A-214ENST00000491288 FNBP4Q8N3X1 1017 aaPredicted RBP19.4■□□□□ 0.7
DNMT3A-214ENST00000491288 STK26Q9P289 416 aa19.4■□□□□ 0.7
DNMT3A-214ENST00000491288 SIRT1Q96EB6 747 aa19.39■□□□□ 0.69
DNMT3A-214ENST00000491288 NPHP3Q7Z494 1330 aa19.39■□□□□ 0.69
DNMT3A-214ENST00000491288 CLSPNQ9HAW4 1339 aa19.39■□□□□ 0.69
DNMT3A-214ENST00000491288 TONSLQ96HA7 1378 aa19.39■□□□□ 0.69
DNMT3A-214ENST00000491288 RGS12O14924 1447 aa19.39■□□□□ 0.69
DNMT3A-214ENST00000491288 WAPLQ7Z5K2 1190 aa19.38■□□□□ 0.69
DNMT3A-214ENST00000491288 NGLY1Q96IV0 654 aa19.38■□□□□ 0.69
DNMT3A-214ENST00000491288 PXDNQ92626 1479 aa19.37■□□□□ 0.69
DNMT3A-214ENST00000491288 NRXN1Q9ULB1 1477 aa19.37■□□□□ 0.69
DNMT3A-214ENST00000491288 ADAMTS2O95450 1211 aa19.37■□□□□ 0.69
DNMT3A-214ENST00000491288 ESCO1Q5FWF5 840 aa19.37■□□□□ 0.69
DNMT3A-214ENST00000491288 COL22A1Q8NFW1 1626 aaPredicted RBP19.36■□□□□ 0.69
DNMT3A-214ENST00000491288 PLEKHH1Q9ULM0 1364 aa19.35■□□□□ 0.69
DNMT3A-214ENST00000491288 YTHDC2Q9H6S0 1430 aaKnown RBP19.34■□□□□ 0.69
DNMT3A-214ENST00000491288 FOXO3O43524 673 aa19.34■□□□□ 0.69
DNMT3A-214ENST00000491288 USP21Q9UK80 565 aa19.33■□□□□ 0.68
DNMT3A-214ENST00000491288 TRPC5Q9UL62 973 aaPredicted RBP19.32■□□□□ 0.68
DNMT3A-214ENST00000491288 ATRNO75882 1429 aa19.31■□□□□ 0.68
DNMT3A-214ENST00000491288 KNDC1Q76NI1 1749 aa19.31■□□□□ 0.68
DNMT3A-214ENST00000491288 BCL9LQ86UU0 1499 aa19.3■□□□□ 0.68
DNMT3A-214ENST00000491288 POGKQ9P215 609 aa19.3■□□□□ 0.68
DNMT3A-214ENST00000491288 TIMELESSQ9UNS1 1208 aa19.3■□□□□ 0.68
DNMT3A-214ENST00000491288 TRAK1Q9UPV9 953 aa19.28■□□□□ 0.68
DNMT3A-214ENST00000491288 SPATA31A3Q5VYP0 1347 aa19.27■□□□□ 0.68
DNMT3A-214ENST00000491288 NUTM2FA1L443 756 aa19.27■□□□□ 0.68
DNMT3A-214ENST00000491288 XPCQ01831 940 aaPredicted RBP19.27■□□□□ 0.68
DNMT3A-214ENST00000491288 NBPF1Q3BBV0 1214 aa19.25■□□□□ 0.67
DNMT3A-214ENST00000491288 PRAM1Q96QH2 718 aa19.24■□□□□ 0.67
DNMT3A-214ENST00000491288 FMN2Q9NZ56 1722 aa19.24■□□□□ 0.67
DNMT3A-214ENST00000491288 KIAA1210Q9ULL0 1709 aa19.23■□□□□ 0.67
DNMT3A-214ENST00000491288 ATAD2Q6PL18 1390 aa19.23■□□□□ 0.67
DNMT3A-214ENST00000491288 SAFB2Q14151 953 aaKnown RBP eCLIP19.23■□□□□ 0.67
DNMT3A-214ENST00000491288 SLIT2O94813 1529 aa19.22■□□□□ 0.67
DNMT3A-214ENST00000491288 KRT28Q7Z3Y7 464 aa19.22■□□□□ 0.67
DNMT3A-214ENST00000491288 DLC1Q96QB1 1528 aa19.21■□□□□ 0.67
DNMT3A-214ENST00000491288 NBPF8Q3BBV2 869 aa19.21■□□□□ 0.67
DNMT3A-214ENST00000491288 GJD4Q96KN9 370 aaPredicted RBP19.21■□□□□ 0.67
DNMT3A-214ENST00000491288 PHF8Q9UPP1 1060 aa19.21■□□□□ 0.67
DNMT3A-214ENST00000491288 KIF1AQ12756 1690 aa19.2■□□□□ 0.66
DNMT3A-214ENST00000491288 ADGRB1O14514 1584 aa19.2■□□□□ 0.66
DNMT3A-214ENST00000491288 ROCK2O75116 1388 aaKnown RBP19.19■□□□□ 0.66
DNMT3A-214ENST00000491288 UNC5CLQ8IV45 518 aa19.19■□□□□ 0.66
DNMT3A-214ENST00000491288 SBNO1A3KN83 1393 aa19.19■□□□□ 0.66
DNMT3A-214ENST00000491288 ANKARQ7Z5J8 1434 aa19.18■□□□□ 0.66
DNMT3A-214ENST00000491288 TNS3Q68CZ2 1445 aa19.17■□□□□ 0.66
DNMT3A-214ENST00000491288 SRCAPQ6ZRS2 3230 aa19.17■□□□□ 0.66
DNMT3A-214ENST00000491288 PSME1Q06323 249 aa19.17■□□□□ 0.66
DNMT3A-214ENST00000491288 CARD11Q9BXL7 1154 aa19.17■□□□□ 0.66
DNMT3A-214ENST00000491288 EP400Q96L91 3159 aa19.16■□□□□ 0.66
DNMT3A-214ENST00000491288 MARF1Q9Y4F3 1742 aaKnown RBP19.15■□□□□ 0.66
DNMT3A-214ENST00000491288 CCDC125Q86Z20 511 aa19.15■□□□□ 0.66
DNMT3A-214ENST00000491288 MINK1Q8N4C8 1332 aaPredicted RBP19.15■□□□□ 0.66
DNMT3A-214ENST00000491288 ADGRB2O60241 1585 aa19.15■□□□□ 0.66
DNMT3A-214ENST00000491288 RALGAPBQ86X10 1494 aa19.14■□□□□ 0.65
DNMT3A-214ENST00000491288 TRPM1Q7Z4N2 1603 aa19.14■□□□□ 0.65
DNMT3A-214ENST00000491288 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.14■□□□□ 0.65
DNMT3A-214ENST00000491288 ONECUT3O60422 494 aaPredicted RBP19.13■□□□□ 0.65
DNMT3A-214ENST00000491288 ARHGEF10O15013 1369 aa19.13■□□□□ 0.65
DNMT3A-214ENST00000491288 USP32Q8NFA0 1604 aa19.13■□□□□ 0.65
DNMT3A-214ENST00000491288 GLI3P10071 1580 aa19.12■□□□□ 0.65
DNMT3A-214ENST00000491288 CENPJQ9HC77 1338 aaPredicted RBP19.12■□□□□ 0.65
DNMT3A-214ENST00000491288 HIRIP3Q9BW71 556 aaPredicted RBP19.12■□□□□ 0.65
DNMT3A-214ENST00000491288 VPS72Q15906 364 aa19.11■□□□□ 0.65
DNMT3A-214ENST00000491288 CABLES1Q8TDN4 633 aa19.11■□□□□ 0.65
DNMT3A-214ENST00000491288 EIF3AQ14152 1382 aaKnown RBP19.1■□□□□ 0.65
DNMT3A-214ENST00000491288 PRR36Q9H6K5 1346 aa19.1■□□□□ 0.65
DNMT3A-214ENST00000491288 WASLO00401 505 aaPredicted RBP19.09■□□□□ 0.65
DNMT3A-214ENST00000491288 PMFBP1Q8TBY8 1022 aa19.09■□□□□ 0.65
DNMT3A-214ENST00000491288 GPRASP1Q5JY77 1395 aa19.07■□□□□ 0.64
DNMT3A-214ENST00000491288 FAM83GA6ND36 823 aa19.07■□□□□ 0.64
DNMT3A-214ENST00000491288 ARHGEF28Q8N1W1 1705 aaKnown RBP19.07■□□□□ 0.64
DNMT3A-214ENST00000491288 RGPD8O14715 1765 aaPredicted RBP19.06■□□□□ 0.64
DNMT3A-214ENST00000491288 TULP4Q9NRJ4 1543 aa19.05■□□□□ 0.64
DNMT3A-214ENST00000491288 CDK19Q9BWU1 502 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms