RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 SLC4A1APQ9BWU0 796 aaKnown RBP31.17■■■□□ 2.58
CLIP2-208ENST00000491075 MARF1Q9Y4F3 1742 aaKnown RBP31.17■■■□□ 2.58
CLIP2-208ENST00000491075 TRPC5Q9UL62 973 aaPredicted RBP31.16■■■□□ 2.58
CLIP2-208ENST00000491075 FNBP4Q8N3X1 1017 aaPredicted RBP31.15■■■□□ 2.58
CLIP2-208ENST00000491075 MYOM2P54296 1465 aa31.14■■■□□ 2.58
CLIP2-208ENST00000491075 NPHP3Q7Z494 1330 aa31.14■■■□□ 2.58
CLIP2-208ENST00000491075 ATRNO75882 1429 aa31.13■■■□□ 2.57
CLIP2-208ENST00000491075 PXDNQ92626 1479 aa31.13■■■□□ 2.57
CLIP2-208ENST00000491075 IFT172Q9UG01 1749 aa31.1■■■□□ 2.57
CLIP2-208ENST00000491075 EP400Q96L91 3159 aa31.09■■■□□ 2.57
CLIP2-208ENST00000491075 ESCO1Q5FWF5 840 aa31.09■■■□□ 2.57
CLIP2-208ENST00000491075 KNDC1Q76NI1 1749 aa31.08■■■□□ 2.57
CLIP2-208ENST00000491075 TECPR2O15040 1411 aa31.07■■■□□ 2.57
CLIP2-208ENST00000491075 SRCAPQ6ZRS2 3230 aa31.06■■■□□ 2.56
CLIP2-208ENST00000491075 LRPPRCP42704 1394 aaKnown RBP31.05■■■□□ 2.56
CLIP2-208ENST00000491075 CCDC144AA2RUR9 1427 aa31.04■■■□□ 2.56
CLIP2-208ENST00000491075 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.04■■■□□ 2.56
CLIP2-208ENST00000491075 BCL9LQ86UU0 1499 aa31.03■■■□□ 2.56
CLIP2-208ENST00000491075 ADGRF5Q8IZF2 1346 aa31.02■■■□□ 2.56
CLIP2-208ENST00000491075 FMN2Q9NZ56 1722 aa31.01■■■□□ 2.56
CLIP2-208ENST00000491075 KIF1AQ12756 1690 aa31.01■■■□□ 2.55
CLIP2-208ENST00000491075 FOXO3O43524 673 aa31.01■■■□□ 2.55
CLIP2-208ENST00000491075 ANKRD30BQ9BXX2 1392 aa31.01■■■□□ 2.55
CLIP2-208ENST00000491075 SPATA31E1Q6ZUB1 1445 aa31■■■□□ 2.55
CLIP2-208ENST00000491075 XPCQ01831 940 aaPredicted RBP30.98■■■□□ 2.55
CLIP2-208ENST00000491075 FOXD1Q16676 465 aa30.98■■■□□ 2.55
CLIP2-208ENST00000491075 ABCC11Q96J66 1382 aa30.97■■■□□ 2.55
CLIP2-208ENST00000491075 STK26Q9P289 416 aa30.97■■■□□ 2.55
CLIP2-208ENST00000491075 WAPLQ7Z5K2 1190 aa30.95■■■□□ 2.55
CLIP2-208ENST00000491075 PIK3C2GO75747 1445 aa30.95■■■□□ 2.54
CLIP2-208ENST00000491075 RGL3Q3MIN7 710 aa30.94■■■□□ 2.54
CLIP2-208ENST00000491075 NUTM2FA1L443 756 aa30.93■■■□□ 2.54
CLIP2-208ENST00000491075 CCDC125Q86Z20 511 aa30.93■■■□□ 2.54
CLIP2-208ENST00000491075 GJD4Q96KN9 370 aaPredicted RBP30.93■■■□□ 2.54
CLIP2-208ENST00000491075 PLEKHH1Q9ULM0 1364 aa30.92■■■□□ 2.54
CLIP2-208ENST00000491075 USP32Q8NFA0 1604 aa30.91■■■□□ 2.54
CLIP2-208ENST00000491075 ZRANB1Q9UGI0 708 aa30.9■■■□□ 2.54
CLIP2-208ENST00000491075 YTHDC2Q9H6S0 1430 aaKnown RBP30.9■■■□□ 2.54
CLIP2-208ENST00000491075 SLIT2O94813 1529 aa30.89■■■□□ 2.54
CLIP2-208ENST00000491075 GLI3P10071 1580 aa30.89■■■□□ 2.54
CLIP2-208ENST00000491075 SPATA31A3Q5VYP0 1347 aa30.89■■■□□ 2.54
CLIP2-208ENST00000491075 TMEM132EQ6IEE7 984 aa30.88■■■□□ 2.53
CLIP2-208ENST00000491075 RGPD8O14715 1765 aaPredicted RBP30.87■■■□□ 2.53
CLIP2-208ENST00000491075 UNC5CLQ8IV45 518 aa30.86■■■□□ 2.53
CLIP2-208ENST00000491075 RALGAPBQ86X10 1494 aa30.86■■■□□ 2.53
CLIP2-208ENST00000491075 MPHOSPH9Q99550 1183 aa30.85■■■□□ 2.53
CLIP2-208ENST00000491075 BRWD3Q6RI45 1802 aa30.82■■■□□ 2.52
CLIP2-208ENST00000491075 SIRT1Q96EB6 747 aa30.82■■■□□ 2.52
CLIP2-208ENST00000491075 TNS3Q68CZ2 1445 aa30.81■■■□□ 2.52
CLIP2-208ENST00000491075 KRT28Q7Z3Y7 464 aa30.81■■■□□ 2.52
CLIP2-208ENST00000491075 ABCA3Q99758 1704 aa30.81■■■□□ 2.52
CLIP2-208ENST00000491075 NWD2Q9ULI1 1742 aa30.81■■■□□ 2.52
CLIP2-208ENST00000491075 PLCH1Q4KWH8 1693 aa30.81■■■□□ 2.52
CLIP2-208ENST00000491075 BLMP54132 1417 aaPredicted RBP30.8■■■□□ 2.52
CLIP2-208ENST00000491075 NRXN1Q9ULB1 1477 aa30.78■■■□□ 2.52
CLIP2-208ENST00000491075 PHF8Q9UPP1 1060 aa30.77■■■□□ 2.52
CLIP2-208ENST00000491075 PSME1Q06323 249 aa30.76■■■□□ 2.51
CLIP2-208ENST00000491075 HAP1P54257 671 aaPredicted RBP30.75■■■□□ 2.51
CLIP2-208ENST00000491075 C14orf93Q9H972 538 aaKnown RBP30.75■■■□□ 2.51
CLIP2-208ENST00000491075 DHX57Q6P158 1386 aaKnown RBP30.75■■■□□ 2.51
CLIP2-208ENST00000491075 SBNO1A3KN83 1393 aa30.74■■■□□ 2.51
CLIP2-208ENST00000491075 ARHGEF10O15013 1369 aa30.72■■■□□ 2.51
CLIP2-208ENST00000491075 ACIN1Q9UKV3 1341 aaKnown RBP30.72■■■□□ 2.51
CLIP2-208ENST00000491075 DLC1Q96QB1 1528 aa30.7■■■□□ 2.51
CLIP2-208ENST00000491075 VPS72Q15906 364 aa30.7■■■□□ 2.51
CLIP2-208ENST00000491075 ADGRB2O60241 1585 aa30.69■■■□□ 2.5
CLIP2-208ENST00000491075 ANKARQ7Z5J8 1434 aa30.68■■■□□ 2.5
CLIP2-208ENST00000491075 CFAP70Q5T0N1 1121 aa30.67■■■□□ 2.5
CLIP2-208ENST00000491075 SEPT12Q8IYM1 358 aa30.67■■■□□ 2.5
CLIP2-208ENST00000491075 CABLES1Q8TDN4 633 aa30.67■■■□□ 2.5
CLIP2-208ENST00000491075 PRAM1Q96QH2 718 aa30.66■■■□□ 2.5
CLIP2-208ENST00000491075 SF3B2Q13435 895 aaKnown RBP30.65■■■□□ 2.5
CLIP2-208ENST00000491075 TRPM3Q9HCF6 1732 aaPredicted RBP30.64■■■□□ 2.5
CLIP2-208ENST00000491075 LMOD2Q6P5Q4 547 aa30.64■■■□□ 2.5
CLIP2-208ENST00000491075 NRAPQ86VF7 1730 aa30.64■■■□□ 2.5
CLIP2-208ENST00000491075 ONECUT3O60422 494 aaPredicted RBP30.63■■■□□ 2.49
CLIP2-208ENST00000491075 SAFB2Q14151 953 aaKnown RBP eCLIP30.63■■■□□ 2.49
CLIP2-208ENST00000491075 CCDC9Q9Y3X0 531 aaKnown RBP30.63■■■□□ 2.49
CLIP2-208ENST00000491075 PLEKHG5O94827 1062 aa30.61■■■□□ 2.49
CLIP2-208ENST00000491075 DEFB132Q7Z7B7 95 aa30.61■■■□□ 2.49
CLIP2-208ENST00000491075 ALS2Q96Q42 1657 aa30.6■■■□□ 2.49
CLIP2-208ENST00000491075 POGKQ9P215 609 aa30.6■■■□□ 2.49
CLIP2-208ENST00000491075 ADGRB1O14514 1584 aa30.59■■■□□ 2.49
CLIP2-208ENST00000491075 KRT27Q7Z3Y8 459 aa30.59■■■□□ 2.49
CLIP2-208ENST00000491075 COL14A1Q05707 1796 aaKnown RBP30.58■■■□□ 2.49
CLIP2-208ENST00000491075 PMFBP1Q8TBY8 1022 aa30.57■■■□□ 2.48
CLIP2-208ENST00000491075 LRP5O75197 1615 aa30.57■■■□□ 2.48
CLIP2-208ENST00000491075 EIF3AQ14152 1382 aaKnown RBP30.56■■■□□ 2.48
CLIP2-208ENST00000491075 FAM83GA6ND36 823 aa30.55■■■□□ 2.48
CLIP2-208ENST00000491075 TULP4Q9NRJ4 1543 aa30.53■■■□□ 2.48
CLIP2-208ENST00000491075 CRYBG1Q9Y4K1 1723 aa30.53■■■□□ 2.48
CLIP2-208ENST00000491075 GPRASP1Q5JY77 1395 aa30.53■■■□□ 2.48
CLIP2-208ENST00000491075 A0A0G2JS52 829 aa30.51■■■□□ 2.47
CLIP2-208ENST00000491075 MYT1Q01538 1121 aa30.51■■■□□ 2.47
CLIP2-208ENST00000491075 RGPD1P0DJD0 1748 aa30.5■■■□□ 2.47
CLIP2-208ENST00000491075 BTG4Q9NY30 223 aa30.49■■■□□ 2.47
CLIP2-208ENST00000491075 BAG6P46379 1132 aa30.48■■■□□ 2.47
CLIP2-208ENST00000491075 TRAK1Q9UPV9 953 aa30.48■■■□□ 2.47
CLIP2-208ENST00000491075 ITSN1Q15811 1721 aa30.47■■■□□ 2.47
CLIP2-208ENST00000491075 FAM98CQ17RN3 349 aaKnown RBP30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms