RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 ADGRL1O94910 1474 aa8.48□□□□□ -1.05
FN1-223ENST00000490833 TRPM2O94759 1503 aa8.48□□□□□ -1.05
FN1-223ENST00000490833 NPC1L1Q9UHC9 1359 aa8.48□□□□□ -1.05
FN1-223ENST00000490833 SMG6Q86US8 1419 aaKnown RBP8.47□□□□□ -1.05
FN1-223ENST00000490833 CIZ1Q9ULV3 898 aaPredicted RBP8.47□□□□□ -1.05
FN1-223ENST00000490833 KNSTRNQ9Y448 316 aa8.47□□□□□ -1.05
FN1-223ENST00000490833 ASXL2Q76L83 1435 aa8.46□□□□□ -1.05
FN1-223ENST00000490833 TRAPPC8Q9Y2L5 1435 aa8.46□□□□□ -1.05
FN1-223ENST00000490833 PLA2R1Q13018 1463 aa8.46□□□□□ -1.05
FN1-223ENST00000490833 NEO1Q92859 1461 aa8.46□□□□□ -1.05
FN1-223ENST00000490833 MLH3Q9UHC1 1453 aa8.46□□□□□ -1.05
FN1-223ENST00000490833 ATP7AQ04656 1500 aa8.46□□□□□ -1.05
FN1-223ENST00000490833 LMTK2Q8IWU2 1503 aa8.46□□□□□ -1.05
FN1-223ENST00000490833 C3orf67Q6ZVT6 689 aa8.46□□□□□ -1.06
FN1-223ENST00000490833 AFAP1Q8N556 730 aa8.46□□□□□ -1.06
FN1-223ENST00000490833 POLR3GLQ9BT43 218 aa8.46□□□□□ -1.06
FN1-223ENST00000490833 NUDCQ9Y266 331 aa8.46□□□□□ -1.06
FN1-223ENST00000490833 TRPM1Q7Z4N2 1603 aa8.46□□□□□ -1.06
FN1-223ENST00000490833 TET3O43151 1660 aa8.46□□□□□ -1.06
FN1-223ENST00000490833 A2MP01023 1474 aa8.45□□□□□ -1.06
FN1-223ENST00000490833 SCAF11Q99590 1463 aaKnown RBP8.45□□□□□ -1.06
FN1-223ENST00000490833 ZFYVE16Q7Z3T8 1539 aa8.45□□□□□ -1.06
FN1-223ENST00000490833 DEPDC5O75140 1603 aa8.45□□□□□ -1.06
FN1-223ENST00000490833 FAM205CA6NFA0 338 aa8.45□□□□□ -1.06
FN1-223ENST00000490833 KIF3BO15066 747 aa8.45□□□□□ -1.06
FN1-223ENST00000490833 PARD3Q8TEW0 1356 aa8.45□□□□□ -1.06
FN1-223ENST00000490833 CD109Q6YHK3 1445 aa8.45□□□□□ -1.06
FN1-223ENST00000490833 VWDEQ8N2E2 1590 aa8.44□□□□□ -1.06
FN1-223ENST00000490833 KIAA1210Q9ULL0 1709 aa8.44□□□□□ -1.06
FN1-223ENST00000490833 PER1O15534 1290 aaPredicted RBP8.44□□□□□ -1.06
FN1-223ENST00000490833 PSEN1P49768 467 aa8.44□□□□□ -1.06
FN1-223ENST00000490833 TESK2Q96S53 571 aa8.44□□□□□ -1.06
FN1-223ENST00000490833 LRPPRCP42704 1394 aaKnown RBP8.44□□□□□ -1.06
FN1-223ENST00000490833 SBNO2Q9Y2G9 1366 aa8.44□□□□□ -1.06
FN1-223ENST00000490833 COL17A1Q9UMD9 1497 aaPredicted RBP8.44□□□□□ -1.06
FN1-223ENST00000490833 ERCC6L2Q5T890 1561 aa8.44□□□□□ -1.06
FN1-223ENST00000490833 VGFO15240 615 aaPredicted RBP8.43□□□□□ -1.06
FN1-223ENST00000490833 SPOCK2Q92563 424 aa8.43□□□□□ -1.06
FN1-223ENST00000490833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.43□□□□□ -1.06
FN1-223ENST00000490833 MYOM2P54296 1465 aa8.43□□□□□ -1.06
FN1-223ENST00000490833 INO80Q9ULG1 1556 aaPredicted RBP8.43□□□□□ -1.06
FN1-223ENST00000490833 SLC52A1Q9NWF4 448 aa8.42□□□□□ -1.06
FN1-223ENST00000490833 RNF123Q5XPI4 1314 aa8.42□□□□□ -1.06
FN1-223ENST00000490833 CHRM1P11229 460 aaPredicted RBP8.41□□□□□ -1.06
FN1-223ENST00000490833 L3MBTL3Q96JM7 780 aaPredicted RBP8.41□□□□□ -1.06
FN1-223ENST00000490833 PDAP1Q13442 181 aaKnown RBP8.4□□□□□ -1.06
FN1-223ENST00000490833 NBPF1Q3BBV0 1214 aa8.4□□□□□ -1.06
FN1-223ENST00000490833 PDCD7Q8N8D1 485 aaKnown RBP8.4□□□□□ -1.06
FN1-223ENST00000490833 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.4□□□□□ -1.06
FN1-223ENST00000490833 PANK3Q9H999 370 aa8.4□□□□□ -1.06
FN1-223ENST00000490833 SPHKAPQ2M3C7 1700 aa8.4□□□□□ -1.07
FN1-223ENST00000490833 BCORL1Q5H9F3 1711 aa8.4□□□□□ -1.07
FN1-223ENST00000490833 ARHGAP31Q2M1Z3 1444 aa8.39□□□□□ -1.07
FN1-223ENST00000490833 POGZQ7Z3K3 1410 aa8.39□□□□□ -1.07
FN1-223ENST00000490833 WDR43Q15061 677 aaKnown RBP eCLIP8.39□□□□□ -1.07
FN1-223ENST00000490833 IFNLR1Q8IU57 520 aaPredicted RBP8.39□□□□□ -1.07
FN1-223ENST00000490833 CEP152O94986 1710 aa8.39□□□□□ -1.07
FN1-223ENST00000490833 G3V3G9 751 aa8.38□□□□□ -1.07
FN1-223ENST00000490833 CABP2Q9NPB3 220 aa8.38□□□□□ -1.07
FN1-223ENST00000490833 TSHZ2Q9NRE2 1034 aa8.38□□□□□ -1.07
FN1-223ENST00000490833 EFCAB6Q5THR3 1501 aa8.38□□□□□ -1.07
FN1-223ENST00000490833 NINLQ9Y2I6 1382 aa8.37□□□□□ -1.07
FN1-223ENST00000490833 E9PCH4 1651 aa8.37□□□□□ -1.07
FN1-223ENST00000490833 RNF17Q9BXT8 1623 aaKnown RBP8.37□□□□□ -1.07
FN1-223ENST00000490833 SETBP1Q9Y6X0 1596 aa8.37□□□□□ -1.07
FN1-223ENST00000490833 HDGFP51858 240 aaKnown RBP8.37□□□□□ -1.07
FN1-223ENST00000490833 AAMPQ13685 434 aa8.37□□□□□ -1.07
FN1-223ENST00000490833 RNF166Q96A37 237 aaPredicted RBP8.37□□□□□ -1.07
FN1-223ENST00000490833 C14orf93Q9H972 538 aaKnown RBP8.37□□□□□ -1.07
FN1-223ENST00000490833 PIK3C2GO75747 1445 aa8.37□□□□□ -1.07
FN1-223ENST00000490833 ZFYVE9O95405 1425 aa8.37□□□□□ -1.07
FN1-223ENST00000490833 SYNMO15061 1565 aa8.36□□□□□ -1.07
FN1-223ENST00000490833 NRXN1Q9ULB1 1477 aa8.36□□□□□ -1.07
FN1-223ENST00000490833 MADDQ8WXG6 1647 aa8.36□□□□□ -1.07
FN1-223ENST00000490833 KIF1BO60333 1816 aa8.36□□□□□ -1.07
FN1-223ENST00000490833 FANCIQ9NVI1 1328 aa8.35□□□□□ -1.07
FN1-223ENST00000490833 CCDC184Q52MB2 194 aa8.35□□□□□ -1.07
FN1-223ENST00000490833 CCDC136Q96JN2 1154 aa8.35□□□□□ -1.07
FN1-223ENST00000490833 PNNQ9H307 717 aaKnown RBP8.35□□□□□ -1.07
FN1-223ENST00000490833 HECW2Q9P2P5 1572 aa8.35□□□□□ -1.07
FN1-223ENST00000490833 CENPJQ9HC77 1338 aaPredicted RBP8.34□□□□□ -1.07
FN1-223ENST00000490833 BCANQ96GW7 911 aa8.34□□□□□ -1.07
FN1-223ENST00000490833 RCAN3Q9UKA8 241 aa8.34□□□□□ -1.07
FN1-223ENST00000490833 GLI2P10070 1586 aa8.34□□□□□ -1.07
FN1-223ENST00000490833 NSD2O96028 1365 aa8.34□□□□□ -1.07
FN1-223ENST00000490833 DISP3Q9P2K9 1392 aa8.34□□□□□ -1.07
FN1-223ENST00000490833 ASXL1Q8IXJ9 1541 aa8.34□□□□□ -1.08
FN1-223ENST00000490833 EVC2Q86UK5 1308 aa8.33□□□□□ -1.08
FN1-223ENST00000490833 MAP3K4Q9Y6R4 1608 aa8.33□□□□□ -1.08
FN1-223ENST00000490833 BLMP54132 1417 aaPredicted RBP8.33□□□□□ -1.08
FN1-223ENST00000490833 AMER1Q5JTC6 1135 aaPredicted RBP8.33□□□□□ -1.08
FN1-223ENST00000490833 CFAP53Q96M91 514 aa8.33□□□□□ -1.08
FN1-223ENST00000490833 IQGAP1P46940 1657 aa8.33□□□□□ -1.08
FN1-223ENST00000490833 KIDINS220Q9ULH0 1771 aa8.33□□□□□ -1.08
FN1-223ENST00000490833 PPP2R1AP30153 589 aa8.32□□□□□ -1.08
FN1-223ENST00000490833 GGT6Q6P531 493 aa8.32□□□□□ -1.08
FN1-223ENST00000490833 RBM19Q9Y4C8 960 aaKnown RBP8.32□□□□□ -1.08
FN1-223ENST00000490833 ZC3H13Q5T200 1668 aaKnown RBP8.32□□□□□ -1.08
FN1-223ENST00000490833 CLTCL1P53675 1640 aa8.32□□□□□ -1.08
FN1-223ENST00000490833 CGNL1Q0VF96 1302 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms