RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 ORAI2Q96SN7 254 aa22.48■■□□□ 1.19
PCCB-218ENST00000490504 YTHDC2Q9H6S0 1430 aaKnown RBP22.48■■□□□ 1.19
PCCB-218ENST00000490504 PLEKHH1Q9ULM0 1364 aa22.47■■□□□ 1.19
PCCB-218ENST00000490504 KDM2AQ9Y2K7 1162 aa22.47■■□□□ 1.19
PCCB-218ENST00000490504 DCAF11Q8TEB1 546 aa22.46■■□□□ 1.19
PCCB-218ENST00000490504 SIN3AQ96ST3 1273 aa22.45■■□□□ 1.18
PCCB-218ENST00000490504 TIMELESSQ9UNS1 1208 aa22.44■■□□□ 1.18
PCCB-218ENST00000490504 SPATA31A6Q5VVP1 1343 aa22.44■■□□□ 1.18
PCCB-218ENST00000490504 SIRT1Q96EB6 747 aa22.42■■□□□ 1.18
PCCB-218ENST00000490504 NEUROD1Q13562 356 aa22.42■■□□□ 1.18
PCCB-218ENST00000490504 LRRC59Q96AG4 307 aaKnown RBP22.42■■□□□ 1.18
PCCB-218ENST00000490504 POTEAQ6S8J7 498 aa22.41■■□□□ 1.18
PCCB-218ENST00000490504 LRP6O75581 1613 aa22.4■■□□□ 1.18
PCCB-218ENST00000490504 NUTM2FA1L443 756 aa22.4■■□□□ 1.18
PCCB-218ENST00000490504 NUTM2BA6NNL0 878 aaPredicted RBP22.39■■□□□ 1.17
PCCB-218ENST00000490504 NUTM2EB1AL46 878 aaPredicted RBP22.39■■□□□ 1.17
PCCB-218ENST00000490504 ESCO1Q5FWF5 840 aa22.39■■□□□ 1.17
PCCB-218ENST00000490504 NUTM2AQ8IVF1 878 aaPredicted RBP22.39■■□□□ 1.17
PCCB-218ENST00000490504 NHSL1Q5SYE7 1610 aa22.38■■□□□ 1.17
PCCB-218ENST00000490504 STAC3Q96MF2 364 aa22.38■■□□□ 1.17
PCCB-218ENST00000490504 CDC42BPGQ6DT37 1551 aa22.38■■□□□ 1.17
PCCB-218ENST00000490504 SOS2Q07890 1332 aaPredicted RBP22.37■■□□□ 1.17
PCCB-218ENST00000490504 MEX3CQ5U5Q3 659 aaKnown RBP22.37■■□□□ 1.17
PCCB-218ENST00000490504 PRAM1Q96QH2 718 aa22.37■■□□□ 1.17
PCCB-218ENST00000490504 KNDC1Q76NI1 1749 aa22.36■■□□□ 1.17
PCCB-218ENST00000490504 SAFB2Q14151 953 aaKnown RBP eCLIP22.36■■□□□ 1.17
PCCB-218ENST00000490504 SHPRHQ149N8 1683 aa22.35■■□□□ 1.17
PCCB-218ENST00000490504 PNPLA6Q8IY17 1366 aa22.34■■□□□ 1.17
PCCB-218ENST00000490504 LAMC1P11047 1609 aa22.34■■□□□ 1.17
PCCB-218ENST00000490504 ADGRB1O14514 1584 aa22.34■■□□□ 1.17
PCCB-218ENST00000490504 ZNF316A6NFI3 1004 aaPredicted RBP22.34■■□□□ 1.17
PCCB-218ENST00000490504 TRAK1Q9UPV9 953 aa22.34■■□□□ 1.17
PCCB-218ENST00000490504 TONSLQ96HA7 1378 aa22.34■■□□□ 1.17
PCCB-218ENST00000490504 POGKQ9P215 609 aa22.33■■□□□ 1.17
PCCB-218ENST00000490504 FOXO3O43524 673 aa22.32■■□□□ 1.16
PCCB-218ENST00000490504 NPHP3Q7Z494 1330 aa22.3■■□□□ 1.16
PCCB-218ENST00000490504 XPCQ01831 940 aaPredicted RBP22.3■■□□□ 1.16
PCCB-218ENST00000490504 DLC1Q96QB1 1528 aa22.29■■□□□ 1.16
PCCB-218ENST00000490504 ZNF772Q68DY9 489 aaPredicted RBP22.26■■□□□ 1.15
PCCB-218ENST00000490504 HIRIP3Q9BW71 556 aaPredicted RBP22.26■■□□□ 1.15
PCCB-218ENST00000490504 PXDNQ92626 1479 aa22.25■■□□□ 1.15
PCCB-218ENST00000490504 MINK1Q8N4C8 1332 aaPredicted RBP22.24■■□□□ 1.15
PCCB-218ENST00000490504 ADAMTS2O95450 1211 aa22.24■■□□□ 1.15
PCCB-218ENST00000490504 FMN2Q9NZ56 1722 aa22.23■■□□□ 1.15
PCCB-218ENST00000490504 C8orf37Q96NL8 207 aa22.23■■□□□ 1.15
PCCB-218ENST00000490504 PHF8Q9UPP1 1060 aa22.23■■□□□ 1.15
PCCB-218ENST00000490504 AFF2P51816 1311 aa22.23■■□□□ 1.15
PCCB-218ENST00000490504 NBPF1Q3BBV0 1214 aa22.21■■□□□ 1.15
PCCB-218ENST00000490504 KRT28Q7Z3Y7 464 aa22.2■■□□□ 1.15
PCCB-218ENST00000490504 L3MBTL2Q969R5 705 aa22.2■■□□□ 1.15
PCCB-218ENST00000490504 WASLO00401 505 aaPredicted RBP22.18■■□□□ 1.14
PCCB-218ENST00000490504 PMFBP1Q8TBY8 1022 aa22.17■■□□□ 1.14
PCCB-218ENST00000490504 NGLY1Q96IV0 654 aa22.17■■□□□ 1.14
PCCB-218ENST00000490504 SPATA31A3Q5VYP0 1347 aa22.17■■□□□ 1.14
PCCB-218ENST00000490504 PRR36Q9H6K5 1346 aa22.17■■□□□ 1.14
PCCB-218ENST00000490504 ANKARQ7Z5J8 1434 aa22.16■■□□□ 1.14
PCCB-218ENST00000490504 ADGRB2O60241 1585 aa22.16■■□□□ 1.14
PCCB-218ENST00000490504 RXRBP28702 533 aa22.15■■□□□ 1.14
PCCB-218ENST00000490504 PSME1Q06323 249 aa22.13■■□□□ 1.13
PCCB-218ENST00000490504 QTRT2Q9H974 415 aaKnown RBP22.13■■□□□ 1.13
PCCB-218ENST00000490504 KIF1AQ12756 1690 aa22.13■■□□□ 1.13
PCCB-218ENST00000490504 DIEXFQ68CQ4 756 aaKnown RBP22.13■■□□□ 1.13
PCCB-218ENST00000490504 USP32Q8NFA0 1604 aa22.12■■□□□ 1.13
PCCB-218ENST00000490504 COL22A1Q8NFW1 1626 aaPredicted RBP22.12■■□□□ 1.13
PCCB-218ENST00000490504 EIF3AQ14152 1382 aaKnown RBP22.11■■□□□ 1.13
PCCB-218ENST00000490504 FNBP4Q8N3X1 1017 aaPredicted RBP22.1■■□□□ 1.13
PCCB-218ENST00000490504 RGPD8O14715 1765 aaPredicted RBP22.1■■□□□ 1.13
PCCB-218ENST00000490504 USP21Q9UK80 565 aa22.09■■□□□ 1.13
PCCB-218ENST00000490504 TULP4Q9NRJ4 1543 aa22.09■■□□□ 1.13
PCCB-218ENST00000490504 ARHGEF28Q8N1W1 1705 aaKnown RBP22.09■■□□□ 1.13
PCCB-218ENST00000490504 SBNO1A3KN83 1393 aa22.09■■□□□ 1.13
PCCB-218ENST00000490504 CDK19Q9BWU1 502 aa22.09■■□□□ 1.13
PCCB-218ENST00000490504 TNS3Q68CZ2 1445 aa22.09■■□□□ 1.13
PCCB-218ENST00000490504 KIAA1210Q9ULL0 1709 aa22.08■■□□□ 1.13
PCCB-218ENST00000490504 LMOD2Q6P5Q4 547 aa22.08■■□□□ 1.13
PCCB-218ENST00000490504 NUDT16Q96DE0 195 aaKnown RBP22.08■■□□□ 1.13
PCCB-218ENST00000490504 PLEKHG5O94827 1062 aa22.07■■□□□ 1.12
PCCB-218ENST00000490504 CABLES1Q8TDN4 633 aa22.07■■□□□ 1.12
PCCB-218ENST00000490504 RBM6P78332 1123 aaKnown RBP22.06■■□□□ 1.12
PCCB-218ENST00000490504 NGDNQ8NEJ9 315 aaKnown RBP22.05■■□□□ 1.12
PCCB-218ENST00000490504 CENPJQ9HC77 1338 aaPredicted RBP22.04■■□□□ 1.12
PCCB-218ENST00000490504 GPRASP1Q5JY77 1395 aa22.04■■□□□ 1.12
PCCB-218ENST00000490504 TRPC5Q9UL62 973 aaPredicted RBP22.03■■□□□ 1.12
PCCB-218ENST00000490504 ATP7BP35670 1465 aa22.03■■□□□ 1.12
PCCB-218ENST00000490504 ARHGEF10O15013 1369 aa22.02■■□□□ 1.12
PCCB-218ENST00000490504 NBPF8Q3BBV2 869 aa22.02■■□□□ 1.11
PCCB-218ENST00000490504 CDK12Q9NYV4 1490 aaPredicted RBP22.02■■□□□ 1.11
PCCB-218ENST00000490504 HAP1P54257 671 aaPredicted RBP22.01■■□□□ 1.11
PCCB-218ENST00000490504 BCL9LQ86UU0 1499 aa22.01■■□□□ 1.11
PCCB-218ENST00000490504 CCDC61Q9Y6R9 512 aa22■■□□□ 1.11
PCCB-218ENST00000490504 ATRNO75882 1429 aa21.99■■□□□ 1.11
PCCB-218ENST00000490504 RGS12O14924 1447 aa21.99■■□□□ 1.11
PCCB-218ENST00000490504 ROCK2O75116 1388 aaKnown RBP21.98■■□□□ 1.11
PCCB-218ENST00000490504 PAK3O75914 559 aaPredicted RBP21.98■■□□□ 1.11
PCCB-218ENST00000490504 SRPK2P78362 688 aaKnown RBP21.97■■□□□ 1.11
PCCB-218ENST00000490504 CABP2Q9NPB3 220 aa21.97■■□□□ 1.11
PCCB-218ENST00000490504 PLEKHG3A1L390 1219 aa21.96■■□□□ 1.11
PCCB-218ENST00000490504 UNC5CLQ8IV45 518 aa21.96■■□□□ 1.11
PCCB-218ENST00000490504 ACEP12821 1306 aa21.96■■□□□ 1.11
PCCB-218ENST00000490504 UPF1Q92900 1129 aaKnown RBP eCLIP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms