RNA–Protein interactions for RNA: ENST00000490458.1

SNAP29-203, Transcript of synaptosome associated protein 29, humanhuman

TSL 2

Gene SNAP29, Length 972 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-203ENST00000490458 RPGRIP1LQ68CZ1 1315 aa24.73■■□□□ 1.55
SNAP29-203ENST00000490458 MYOM2P54296 1465 aa24.72■■□□□ 1.55
SNAP29-203ENST00000490458 ATRNO75882 1429 aa24.72■■□□□ 1.55
SNAP29-203ENST00000490458 TRPC5Q9UL62 973 aaPredicted RBP24.72■■□□□ 1.55
SNAP29-203ENST00000490458 FNBP4Q8N3X1 1017 aaPredicted RBP24.7■■□□□ 1.54
SNAP29-203ENST00000490458 PXDNQ92626 1479 aa24.7■■□□□ 1.54
SNAP29-203ENST00000490458 NPHP3Q7Z494 1330 aa24.67■■□□□ 1.54
SNAP29-203ENST00000490458 SLC4A1APQ9BWU0 796 aaKnown RBP24.67■■□□□ 1.54
SNAP29-203ENST00000490458 ESCO1Q5FWF5 840 aa24.66■■□□□ 1.54
SNAP29-203ENST00000490458 IFT172Q9UG01 1749 aa24.65■■□□□ 1.54
SNAP29-203ENST00000490458 KNDC1Q76NI1 1749 aa24.64■■□□□ 1.54
SNAP29-203ENST00000490458 BCL9LQ86UU0 1499 aa24.63■■□□□ 1.53
SNAP29-203ENST00000490458 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.62■■□□□ 1.53
SNAP29-203ENST00000490458 XPCQ01831 940 aaPredicted RBP24.62■■□□□ 1.53
SNAP29-203ENST00000490458 ADGRF5Q8IZF2 1346 aa24.61■■□□□ 1.53
SNAP29-203ENST00000490458 TECPR2O15040 1411 aa24.61■■□□□ 1.53
SNAP29-203ENST00000490458 FMN2Q9NZ56 1722 aa24.61■■□□□ 1.53
SNAP29-203ENST00000490458 FOXO3O43524 673 aa24.6■■□□□ 1.53
SNAP29-203ENST00000490458 FOXD1Q16676 465 aa24.59■■□□□ 1.53
SNAP29-203ENST00000490458 NUTM2FA1L443 756 aa24.58■■□□□ 1.53
SNAP29-203ENST00000490458 LRPPRCP42704 1394 aaKnown RBP24.57■■□□□ 1.52
SNAP29-203ENST00000490458 KIF1AQ12756 1690 aa24.57■■□□□ 1.52
SNAP29-203ENST00000490458 WAPLQ7Z5K2 1190 aa24.57■■□□□ 1.52
SNAP29-203ENST00000490458 STK26Q9P289 416 aa24.57■■□□□ 1.52
SNAP29-203ENST00000490458 CCDC144AA2RUR9 1427 aa24.57■■□□□ 1.52
SNAP29-203ENST00000490458 PLEKHH1Q9ULM0 1364 aa24.56■■□□□ 1.52
SNAP29-203ENST00000490458 SPATA31E1Q6ZUB1 1445 aa24.56■■□□□ 1.52
SNAP29-203ENST00000490458 GLI3P10071 1580 aa24.54■■□□□ 1.52
SNAP29-203ENST00000490458 GJD4Q96KN9 370 aaPredicted RBP24.54■■□□□ 1.52
SNAP29-203ENST00000490458 RGPD8O14715 1765 aaPredicted RBP24.53■■□□□ 1.52
SNAP29-203ENST00000490458 RGL3Q3MIN7 710 aa24.53■■□□□ 1.52
SNAP29-203ENST00000490458 USP32Q8NFA0 1604 aa24.53■■□□□ 1.52
SNAP29-203ENST00000490458 ABCC11Q96J66 1382 aa24.53■■□□□ 1.52
SNAP29-203ENST00000490458 ANKRD30BQ9BXX2 1392 aa24.53■■□□□ 1.52
SNAP29-203ENST00000490458 BRWD3Q6RI45 1802 aa24.52■■□□□ 1.52
SNAP29-203ENST00000490458 SLIT2O94813 1529 aa24.52■■□□□ 1.52
SNAP29-203ENST00000490458 ZRANB1Q9UGI0 708 aa24.52■■□□□ 1.52
SNAP29-203ENST00000490458 PIK3C2GO75747 1445 aa24.52■■□□□ 1.52
SNAP29-203ENST00000490458 TMEM132EQ6IEE7 984 aa24.51■■□□□ 1.51
SNAP29-203ENST00000490458 RALGAPBQ86X10 1494 aa24.51■■□□□ 1.51
SNAP29-203ENST00000490458 SPATA31A3Q5VYP0 1347 aa24.5■■□□□ 1.51
SNAP29-203ENST00000490458 EP400Q96L91 3159 aa24.49■■□□□ 1.51
SNAP29-203ENST00000490458 CCDC125Q86Z20 511 aa24.49■■□□□ 1.51
SNAP29-203ENST00000490458 YTHDC2Q9H6S0 1430 aaKnown RBP24.49■■□□□ 1.51
SNAP29-203ENST00000490458 UNC5CLQ8IV45 518 aa24.48■■□□□ 1.51
SNAP29-203ENST00000490458 ABCA3Q99758 1704 aa24.47■■□□□ 1.51
SNAP29-203ENST00000490458 PLCH1Q4KWH8 1693 aa24.46■■□□□ 1.51
SNAP29-203ENST00000490458 KRT28Q7Z3Y7 464 aa24.44■■□□□ 1.5
SNAP29-203ENST00000490458 TNS3Q68CZ2 1445 aa24.44■■□□□ 1.5
SNAP29-203ENST00000490458 MPHOSPH9Q99550 1183 aa24.43■■□□□ 1.5
SNAP29-203ENST00000490458 NWD2Q9ULI1 1742 aa24.43■■□□□ 1.5
SNAP29-203ENST00000490458 BLMP54132 1417 aaPredicted RBP24.43■■□□□ 1.5
SNAP29-203ENST00000490458 SIRT1Q96EB6 747 aa24.39■■□□□ 1.49
SNAP29-203ENST00000490458 PHF8Q9UPP1 1060 aa24.39■■□□□ 1.49
SNAP29-203ENST00000490458 NRXN1Q9ULB1 1477 aa24.38■■□□□ 1.49
SNAP29-203ENST00000490458 HAP1P54257 671 aaPredicted RBP24.38■■□□□ 1.49
SNAP29-203ENST00000490458 SRCAPQ6ZRS2 3230 aa24.37■■□□□ 1.49
SNAP29-203ENST00000490458 CABLES1Q8TDN4 633 aa24.37■■□□□ 1.49
SNAP29-203ENST00000490458 C14orf93Q9H972 538 aaKnown RBP24.36■■□□□ 1.49
SNAP29-203ENST00000490458 SBNO1A3KN83 1393 aa24.35■■□□□ 1.49
SNAP29-203ENST00000490458 PLEKHG5O94827 1062 aa24.35■■□□□ 1.49
SNAP29-203ENST00000490458 PSME1Q06323 249 aa24.35■■□□□ 1.49
SNAP29-203ENST00000490458 VPS72Q15906 364 aa24.35■■□□□ 1.49
SNAP29-203ENST00000490458 DEFB132Q7Z7B7 95 aa24.35■■□□□ 1.49
SNAP29-203ENST00000490458 SEPT12Q8IYM1 358 aa24.35■■□□□ 1.49
SNAP29-203ENST00000490458 DHX57Q6P158 1386 aaKnown RBP24.34■■□□□ 1.49
SNAP29-203ENST00000490458 CFAP70Q5T0N1 1121 aa24.34■■□□□ 1.49
SNAP29-203ENST00000490458 NRAPQ86VF7 1730 aa24.33■■□□□ 1.49
SNAP29-203ENST00000490458 SAFB2Q14151 953 aaKnown RBP eCLIP24.32■■□□□ 1.48
SNAP29-203ENST00000490458 ADGRB2O60241 1585 aa24.32■■□□□ 1.48
SNAP29-203ENST00000490458 TRPM3Q9HCF6 1732 aaPredicted RBP24.32■■□□□ 1.48
SNAP29-203ENST00000490458 ARHGEF10O15013 1369 aa24.31■■□□□ 1.48
SNAP29-203ENST00000490458 DLC1Q96QB1 1528 aa24.31■■□□□ 1.48
SNAP29-203ENST00000490458 LMOD2Q6P5Q4 547 aa24.31■■□□□ 1.48
SNAP29-203ENST00000490458 PRAM1Q96QH2 718 aa24.31■■□□□ 1.48
SNAP29-203ENST00000490458 CCDC9Q9Y3X0 531 aaKnown RBP24.31■■□□□ 1.48
SNAP29-203ENST00000490458 SF3B2Q13435 895 aaKnown RBP24.3■■□□□ 1.48
SNAP29-203ENST00000490458 ANKARQ7Z5J8 1434 aa24.29■■□□□ 1.48
SNAP29-203ENST00000490458 ONECUT3O60422 494 aaPredicted RBP24.28■■□□□ 1.48
SNAP29-203ENST00000490458 LRP5O75197 1615 aa24.28■■□□□ 1.48
SNAP29-203ENST00000490458 ALS2Q96Q42 1657 aa24.27■■□□□ 1.48
SNAP29-203ENST00000490458 KRT27Q7Z3Y8 459 aa24.27■■□□□ 1.48
SNAP29-203ENST00000490458 PMFBP1Q8TBY8 1022 aa24.27■■□□□ 1.48
SNAP29-203ENST00000490458 ADGRB1O14514 1584 aa24.25■■□□□ 1.47
SNAP29-203ENST00000490458 FAM83GA6ND36 823 aa24.25■■□□□ 1.47
SNAP29-203ENST00000490458 COL14A1Q05707 1796 aaKnown RBP24.24■■□□□ 1.47
SNAP29-203ENST00000490458 CRYBG1Q9Y4K1 1723 aa24.24■■□□□ 1.47
SNAP29-203ENST00000490458 POGKQ9P215 609 aa24.23■■□□□ 1.47
SNAP29-203ENST00000490458 A0A0G2JS52 829 aa24.22■■□□□ 1.47
SNAP29-203ENST00000490458 MYT1Q01538 1121 aa24.22■■□□□ 1.47
SNAP29-203ENST00000490458 RGPD1P0DJD0 1748 aa24.2■■□□□ 1.46
SNAP29-203ENST00000490458 TULP4Q9NRJ4 1543 aa24.2■■□□□ 1.46
SNAP29-203ENST00000490458 FAM98CQ17RN3 349 aaKnown RBP24.19■■□□□ 1.46
SNAP29-203ENST00000490458 BTG4Q9NY30 223 aa24.19■■□□□ 1.46
SNAP29-203ENST00000490458 PRR36Q9H6K5 1346 aa24.18■■□□□ 1.46
SNAP29-203ENST00000490458 HIRIP3Q9BW71 556 aaPredicted RBP24.18■■□□□ 1.46
SNAP29-203ENST00000490458 GPRASP1Q5JY77 1395 aa24.17■■□□□ 1.46
SNAP29-203ENST00000490458 BAG6P46379 1132 aa24.17■■□□□ 1.46
SNAP29-203ENST00000490458 TRAK1Q9UPV9 953 aa24.17■■□□□ 1.46
SNAP29-203ENST00000490458 EIF3AQ14152 1382 aaKnown RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms