RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 NGLY1Q96IV0 654 aa26.44■■□□□ 1.82
YIPF3-208ENST00000490447 STK26Q9P289 416 aa26.44■■□□□ 1.82
YIPF3-208ENST00000490447 CDC42BPGQ6DT37 1551 aa26.44■■□□□ 1.82
YIPF3-208ENST00000490447 ACIN1Q9UKV3 1341 aaKnown RBP26.44■■□□□ 1.82
YIPF3-208ENST00000490447 ESCO1Q5FWF5 840 aa26.43■■□□□ 1.82
YIPF3-208ENST00000490447 QTRT2Q9H974 415 aaKnown RBP26.43■■□□□ 1.82
YIPF3-208ENST00000490447 NPHP3Q7Z494 1330 aa26.42■■□□□ 1.82
YIPF3-208ENST00000490447 TECPR2O15040 1411 aa26.41■■□□□ 1.82
YIPF3-208ENST00000490447 RBM6P78332 1123 aaKnown RBP26.4■■□□□ 1.82
YIPF3-208ENST00000490447 LRPPRCP42704 1394 aaKnown RBP26.4■■□□□ 1.82
YIPF3-208ENST00000490447 PIK3C2GO75747 1445 aa26.39■■□□□ 1.81
YIPF3-208ENST00000490447 IFT172Q9UG01 1749 aa26.39■■□□□ 1.81
YIPF3-208ENST00000490447 WAPLQ7Z5K2 1190 aa26.39■■□□□ 1.81
YIPF3-208ENST00000490447 TMEM132EQ6IEE7 984 aa26.38■■□□□ 1.81
YIPF3-208ENST00000490447 ABCC11Q96J66 1382 aa26.37■■□□□ 1.81
YIPF3-208ENST00000490447 RGS12O14924 1447 aa26.35■■□□□ 1.81
YIPF3-208ENST00000490447 NUTM2FA1L443 756 aa26.35■■□□□ 1.81
YIPF3-208ENST00000490447 USP21Q9UK80 565 aa26.35■■□□□ 1.81
YIPF3-208ENST00000490447 FOXO3O43524 673 aa26.34■■□□□ 1.81
YIPF3-208ENST00000490447 KNDC1Q76NI1 1749 aa26.33■■□□□ 1.81
YIPF3-208ENST00000490447 YTHDC2Q9H6S0 1430 aaKnown RBP26.33■■□□□ 1.81
YIPF3-208ENST00000490447 COL22A1Q8NFW1 1626 aaPredicted RBP26.33■■□□□ 1.81
YIPF3-208ENST00000490447 PXDNQ92626 1479 aa26.32■■□□□ 1.8
YIPF3-208ENST00000490447 PLEKHH1Q9ULM0 1364 aa26.31■■□□□ 1.8
YIPF3-208ENST00000490447 XPCQ01831 940 aaPredicted RBP26.31■■□□□ 1.8
YIPF3-208ENST00000490447 TRPC5Q9UL62 973 aaPredicted RBP26.31■■□□□ 1.8
YIPF3-208ENST00000490447 FNBP4Q8N3X1 1017 aaPredicted RBP26.29■■□□□ 1.8
YIPF3-208ENST00000490447 MYOM2P54296 1465 aa26.28■■□□□ 1.8
YIPF3-208ENST00000490447 C14orf93Q9H972 538 aaKnown RBP26.27■■□□□ 1.8
YIPF3-208ENST00000490447 DHX57Q6P158 1386 aaKnown RBP26.26■■□□□ 1.79
YIPF3-208ENST00000490447 SIRT1Q96EB6 747 aa26.25■■□□□ 1.79
YIPF3-208ENST00000490447 FMN2Q9NZ56 1722 aa26.24■■□□□ 1.79
YIPF3-208ENST00000490447 RAB3GAP2Q9H2M9 1393 aa26.24■■□□□ 1.79
YIPF3-208ENST00000490447 NRXN1Q9ULB1 1477 aa26.23■■□□□ 1.79
YIPF3-208ENST00000490447 CFAP70Q5T0N1 1121 aa26.23■■□□□ 1.79
YIPF3-208ENST00000490447 KIF1AQ12756 1690 aa26.23■■□□□ 1.79
YIPF3-208ENST00000490447 ATRNO75882 1429 aa26.22■■□□□ 1.79
YIPF3-208ENST00000490447 ATAD2Q6PL18 1390 aa26.22■■□□□ 1.79
YIPF3-208ENST00000490447 SPATA31A3Q5VYP0 1347 aa26.19■■□□□ 1.78
YIPF3-208ENST00000490447 SAFB2Q14151 953 aaKnown RBP eCLIP26.18■■□□□ 1.78
YIPF3-208ENST00000490447 KRT28Q7Z3Y7 464 aa26.18■■□□□ 1.78
YIPF3-208ENST00000490447 PRAM1Q96QH2 718 aa26.18■■□□□ 1.78
YIPF3-208ENST00000490447 PHF8Q9UPP1 1060 aa26.17■■□□□ 1.78
YIPF3-208ENST00000490447 PSME1Q06323 249 aa26.16■■□□□ 1.78
YIPF3-208ENST00000490447 POGKQ9P215 609 aa26.16■■□□□ 1.78
YIPF3-208ENST00000490447 BCL9LQ86UU0 1499 aa26.16■■□□□ 1.78
YIPF3-208ENST00000490447 HAP1P54257 671 aaPredicted RBP26.15■■□□□ 1.78
YIPF3-208ENST00000490447 MARF1Q9Y4F3 1742 aaKnown RBP26.15■■□□□ 1.78
YIPF3-208ENST00000490447 DLC1Q96QB1 1528 aa26.12■■□□□ 1.77
YIPF3-208ENST00000490447 TNS3Q68CZ2 1445 aa26.12■■□□□ 1.77
YIPF3-208ENST00000490447 GJD4Q96KN9 370 aaPredicted RBP26.12■■□□□ 1.77
YIPF3-208ENST00000490447 LMOD2Q6P5Q4 547 aa26.1■■□□□ 1.77
YIPF3-208ENST00000490447 UNC5CLQ8IV45 518 aa26.1■■□□□ 1.77
YIPF3-208ENST00000490447 USP32Q8NFA0 1604 aa26.09■■□□□ 1.77
YIPF3-208ENST00000490447 DCAF11Q8TEB1 546 aa26.08■■□□□ 1.77
YIPF3-208ENST00000490447 TRAK1Q9UPV9 953 aa26.08■■□□□ 1.77
YIPF3-208ENST00000490447 KDM2AQ9Y2K7 1162 aa26.08■■□□□ 1.77
YIPF3-208ENST00000490447 SLIT2O94813 1529 aa26.07■■□□□ 1.76
YIPF3-208ENST00000490447 EP400Q96L91 3159 aa26.07■■□□□ 1.76
YIPF3-208ENST00000490447 ANKARQ7Z5J8 1434 aa26.07■■□□□ 1.76
YIPF3-208ENST00000490447 PLEKHG5O94827 1062 aa26.07■■□□□ 1.76
YIPF3-208ENST00000490447 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.07■■□□□ 1.76
YIPF3-208ENST00000490447 RGPD8O14715 1765 aaPredicted RBP26.07■■□□□ 1.76
YIPF3-208ENST00000490447 SBNO1A3KN83 1393 aa26.06■■□□□ 1.76
YIPF3-208ENST00000490447 ARHGEF10O15013 1369 aa26.06■■□□□ 1.76
YIPF3-208ENST00000490447 PMFBP1Q8TBY8 1022 aa26.06■■□□□ 1.76
YIPF3-208ENST00000490447 ADGRB1O14514 1584 aa26.06■■□□□ 1.76
YIPF3-208ENST00000490447 ADGRB2O60241 1585 aa26.05■■□□□ 1.76
YIPF3-208ENST00000490447 EIF3AQ14152 1382 aaKnown RBP26.05■■□□□ 1.76
YIPF3-208ENST00000490447 CABLES1Q8TDN4 633 aa26.04■■□□□ 1.76
YIPF3-208ENST00000490447 STAC3Q96MF2 364 aa26.04■■□□□ 1.76
YIPF3-208ENST00000490447 HIRIP3Q9BW71 556 aaPredicted RBP26.04■■□□□ 1.76
YIPF3-208ENST00000490447 RALGAPBQ86X10 1494 aa26.03■■□□□ 1.76
YIPF3-208ENST00000490447 MINK1Q8N4C8 1332 aaPredicted RBP26.02■■□□□ 1.76
YIPF3-208ENST00000490447 CCDC125Q86Z20 511 aa26.01■■□□□ 1.75
YIPF3-208ENST00000490447 GPRASP1Q5JY77 1395 aa25.99■■□□□ 1.75
YIPF3-208ENST00000490447 HRCP23327 699 aa25.99■■□□□ 1.75
YIPF3-208ENST00000490447 GLI3P10071 1580 aa25.99■■□□□ 1.75
YIPF3-208ENST00000490447 CCDC9Q9Y3X0 531 aaKnown RBP25.98■■□□□ 1.75
YIPF3-208ENST00000490447 SRCAPQ6ZRS2 3230 aa25.96■■□□□ 1.75
YIPF3-208ENST00000490447 WASLO00401 505 aaPredicted RBP25.96■■□□□ 1.75
YIPF3-208ENST00000490447 VPS72Q15906 364 aa25.96■■□□□ 1.75
YIPF3-208ENST00000490447 TULP4Q9NRJ4 1543 aa25.96■■□□□ 1.75
YIPF3-208ENST00000490447 PLCH1Q4KWH8 1693 aa25.94■■□□□ 1.74
YIPF3-208ENST00000490447 ZRANB1Q9UGI0 708 aa25.94■■□□□ 1.74
YIPF3-208ENST00000490447 ABCA3Q99758 1704 aa25.94■■□□□ 1.74
YIPF3-208ENST00000490447 NWD2Q9ULI1 1742 aa25.93■■□□□ 1.74
YIPF3-208ENST00000490447 PRR36Q9H6K5 1346 aa25.93■■□□□ 1.74
YIPF3-208ENST00000490447 SEPT12Q8IYM1 358 aa25.92■■□□□ 1.74
YIPF3-208ENST00000490447 NGDNQ8NEJ9 315 aaKnown RBP25.92■■□□□ 1.74
YIPF3-208ENST00000490447 BLMP54132 1417 aaPredicted RBP25.9■■□□□ 1.74
YIPF3-208ENST00000490447 FAM83GA6ND36 823 aa25.89■■□□□ 1.74
YIPF3-208ENST00000490447 PAK3O75914 559 aaPredicted RBP25.89■■□□□ 1.74
YIPF3-208ENST00000490447 TRPM3Q9HCF6 1732 aaPredicted RBP25.89■■□□□ 1.73
YIPF3-208ENST00000490447 A0A0G2JS52 829 aa25.88■■□□□ 1.73
YIPF3-208ENST00000490447 MYT1Q01538 1121 aa25.88■■□□□ 1.73
YIPF3-208ENST00000490447 SF3B2Q13435 895 aaKnown RBP25.88■■□□□ 1.73
YIPF3-208ENST00000490447 BTG4Q9NY30 223 aa25.87■■□□□ 1.73
YIPF3-208ENST00000490447 ALS2Q96Q42 1657 aa25.86■■□□□ 1.73
YIPF3-208ENST00000490447 ARHGEF28Q8N1W1 1705 aaKnown RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms