RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 NPHP3Q7Z494 1330 aa29.85■■■□□ 2.37
UPK3B-205ENST00000490360 ATRNO75882 1429 aa29.85■■■□□ 2.37
UPK3B-205ENST00000490360 ZRANB1Q9UGI0 708 aa29.81■■■□□ 2.36
UPK3B-205ENST00000490360 NAIPQ13075 1403 aa29.8■■■□□ 2.36
UPK3B-205ENST00000490360 MYOM2P54296 1465 aa29.8■■■□□ 2.36
UPK3B-205ENST00000490360 CDC42BPGQ6DT37 1551 aa29.79■■■□□ 2.36
UPK3B-205ENST00000490360 LRPPRCP42704 1394 aaKnown RBP29.78■■■□□ 2.36
UPK3B-205ENST00000490360 ESCO1Q5FWF5 840 aa29.78■■■□□ 2.36
UPK3B-205ENST00000490360 EP400Q96L91 3159 aa29.78■■■□□ 2.36
UPK3B-205ENST00000490360 PPLO60437 1756 aa29.77■■■□□ 2.36
UPK3B-205ENST00000490360 MARF1Q9Y4F3 1742 aaKnown RBP29.76■■■□□ 2.35
UPK3B-205ENST00000490360 BCL9LQ86UU0 1499 aa29.74■■■□□ 2.35
UPK3B-205ENST00000490360 PXDNQ92626 1479 aa29.74■■■□□ 2.35
UPK3B-205ENST00000490360 RRBP1Q9P2E9 1410 aaKnown RBP29.73■■■□□ 2.35
UPK3B-205ENST00000490360 SLC4A1APQ9BWU0 796 aaKnown RBP29.72■■■□□ 2.35
UPK3B-205ENST00000490360 PPARGC1BQ86YN6 1023 aaKnown RBP29.71■■■□□ 2.35
UPK3B-205ENST00000490360 GJD4Q96KN9 370 aaPredicted RBP29.71■■■□□ 2.35
UPK3B-205ENST00000490360 FOXO3O43524 673 aa29.7■■■□□ 2.35
UPK3B-205ENST00000490360 TECPR2O15040 1411 aa29.67■■■□□ 2.34
UPK3B-205ENST00000490360 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.67■■■□□ 2.34
UPK3B-205ENST00000490360 XPCQ01831 940 aaPredicted RBP29.62■■■□□ 2.33
UPK3B-205ENST00000490360 UNC5CLQ8IV45 518 aa29.62■■■□□ 2.33
UPK3B-205ENST00000490360 ABCC11Q96J66 1382 aa29.62■■■□□ 2.33
UPK3B-205ENST00000490360 ANKRD30BQ9BXX2 1392 aa29.62■■■□□ 2.33
UPK3B-205ENST00000490360 KIF1AQ12756 1690 aa29.6■■■□□ 2.33
UPK3B-205ENST00000490360 SPATA31A3Q5VYP0 1347 aa29.59■■■□□ 2.33
UPK3B-205ENST00000490360 CCDC144AA2RUR9 1427 aa29.59■■■□□ 2.33
UPK3B-205ENST00000490360 BLMP54132 1417 aaPredicted RBP29.59■■■□□ 2.33
UPK3B-205ENST00000490360 SLIT2O94813 1529 aa29.59■■■□□ 2.33
UPK3B-205ENST00000490360 ADGRF5Q8IZF2 1346 aa29.58■■■□□ 2.33
UPK3B-205ENST00000490360 STK26Q9P289 416 aa29.58■■■□□ 2.33
UPK3B-205ENST00000490360 KNDC1Q76NI1 1749 aa29.57■■■□□ 2.32
UPK3B-205ENST00000490360 WAPLQ7Z5K2 1190 aa29.57■■■□□ 2.32
UPK3B-205ENST00000490360 RALGAPBQ86X10 1494 aa29.56■■■□□ 2.32
UPK3B-205ENST00000490360 NUTM2FA1L443 756 aa29.55■■■□□ 2.32
UPK3B-205ENST00000490360 FMN2Q9NZ56 1722 aa29.54■■■□□ 2.32
UPK3B-205ENST00000490360 GLI3P10071 1580 aa29.53■■■□□ 2.32
UPK3B-205ENST00000490360 SIRT1Q96EB6 747 aa29.53■■■□□ 2.32
UPK3B-205ENST00000490360 USP32Q8NFA0 1604 aa29.53■■■□□ 2.32
UPK3B-205ENST00000490360 SPATA31E1Q6ZUB1 1445 aa29.52■■■□□ 2.32
UPK3B-205ENST00000490360 IFT172Q9UG01 1749 aa29.51■■■□□ 2.32
UPK3B-205ENST00000490360 PSME1Q06323 249 aa29.51■■■□□ 2.31
UPK3B-205ENST00000490360 SF3B2Q13435 895 aaKnown RBP29.51■■■□□ 2.31
UPK3B-205ENST00000490360 RGL3Q3MIN7 710 aa29.51■■■□□ 2.31
UPK3B-205ENST00000490360 KRT28Q7Z3Y7 464 aa29.51■■■□□ 2.31
UPK3B-205ENST00000490360 PIK3C2GO75747 1445 aa29.49■■■□□ 2.31
UPK3B-205ENST00000490360 HAP1P54257 671 aaPredicted RBP29.49■■■□□ 2.31
UPK3B-205ENST00000490360 YTHDC2Q9H6S0 1430 aaKnown RBP29.48■■■□□ 2.31
UPK3B-205ENST00000490360 PLEKHH1Q9ULM0 1364 aa29.48■■■□□ 2.31
UPK3B-205ENST00000490360 VPS72Q15906 364 aa29.47■■■□□ 2.31
UPK3B-205ENST00000490360 TMEM132EQ6IEE7 984 aa29.47■■■□□ 2.31
UPK3B-205ENST00000490360 TNS3Q68CZ2 1445 aa29.46■■■□□ 2.31
UPK3B-205ENST00000490360 BRWD3Q6RI45 1802 aa29.46■■■□□ 2.31
UPK3B-205ENST00000490360 NWD2Q9ULI1 1742 aa29.45■■■□□ 2.31
UPK3B-205ENST00000490360 ONECUT3O60422 494 aaPredicted RBP29.45■■■□□ 2.31
UPK3B-205ENST00000490360 SEPT12Q8IYM1 358 aa29.45■■■□□ 2.31
UPK3B-205ENST00000490360 PHF8Q9UPP1 1060 aa29.45■■■□□ 2.31
UPK3B-205ENST00000490360 SBNO1A3KN83 1393 aa29.43■■■□□ 2.3
UPK3B-205ENST00000490360 ARHGEF10O15013 1369 aa29.42■■■□□ 2.3
UPK3B-205ENST00000490360 DEFB132Q7Z7B7 95 aa29.39■■■□□ 2.3
UPK3B-205ENST00000490360 MPHOSPH9Q99550 1183 aa29.39■■■□□ 2.3
UPK3B-205ENST00000490360 C14orf93Q9H972 538 aaKnown RBP29.39■■■□□ 2.3
UPK3B-205ENST00000490360 RGPD8O14715 1765 aaPredicted RBP29.39■■■□□ 2.29
UPK3B-205ENST00000490360 DHX57Q6P158 1386 aaKnown RBP29.39■■■□□ 2.29
UPK3B-205ENST00000490360 PLCH1Q4KWH8 1693 aa29.38■■■□□ 2.29
UPK3B-205ENST00000490360 KRT27Q7Z3Y8 459 aa29.38■■■□□ 2.29
UPK3B-205ENST00000490360 CCDC9Q9Y3X0 531 aaKnown RBP29.38■■■□□ 2.29
UPK3B-205ENST00000490360 ACIN1Q9UKV3 1341 aaKnown RBP29.38■■■□□ 2.29
UPK3B-205ENST00000490360 NRXN1Q9ULB1 1477 aa29.37■■■□□ 2.29
UPK3B-205ENST00000490360 CABLES1Q8TDN4 633 aa29.35■■■□□ 2.29
UPK3B-205ENST00000490360 LRP5O75197 1615 aa29.34■■■□□ 2.29
UPK3B-205ENST00000490360 LMOD2Q6P5Q4 547 aa29.33■■■□□ 2.29
UPK3B-205ENST00000490360 ABCA3Q99758 1704 aa29.33■■■□□ 2.29
UPK3B-205ENST00000490360 ANKARQ7Z5J8 1434 aa29.31■■■□□ 2.28
UPK3B-205ENST00000490360 BAG6P46379 1132 aa29.31■■■□□ 2.28
UPK3B-205ENST00000490360 FAM83GA6ND36 823 aa29.29■■■□□ 2.28
UPK3B-205ENST00000490360 PRAM1Q96QH2 718 aa29.28■■■□□ 2.28
UPK3B-205ENST00000490360 DLC1Q96QB1 1528 aa29.26■■■□□ 2.27
UPK3B-205ENST00000490360 A0A0G2JS52 829 aa29.26■■■□□ 2.27
UPK3B-205ENST00000490360 MYT1Q01538 1121 aa29.26■■■□□ 2.27
UPK3B-205ENST00000490360 CFAP70Q5T0N1 1121 aa29.26■■■□□ 2.27
UPK3B-205ENST00000490360 POGKQ9P215 609 aa29.26■■■□□ 2.27
UPK3B-205ENST00000490360 PLEKHG5O94827 1062 aa29.24■■■□□ 2.27
UPK3B-205ENST00000490360 EIF3AQ14152 1382 aaKnown RBP29.24■■■□□ 2.27
UPK3B-205ENST00000490360 GPRASP1Q5JY77 1395 aa29.23■■■□□ 2.27
UPK3B-205ENST00000490360 NRAPQ86VF7 1730 aa29.23■■■□□ 2.27
UPK3B-205ENST00000490360 ADGRB2O60241 1585 aa29.22■■■□□ 2.27
UPK3B-205ENST00000490360 SAFB2Q14151 953 aaKnown RBP eCLIP29.22■■■□□ 2.27
UPK3B-205ENST00000490360 PMFBP1Q8TBY8 1022 aa29.22■■■□□ 2.27
UPK3B-205ENST00000490360 BTG4Q9NY30 223 aa29.22■■■□□ 2.27
UPK3B-205ENST00000490360 COL14A1Q05707 1796 aaKnown RBP29.21■■■□□ 2.27
UPK3B-205ENST00000490360 FAM98CQ17RN3 349 aaKnown RBP29.21■■■□□ 2.27
UPK3B-205ENST00000490360 TRPM3Q9HCF6 1732 aaPredicted RBP29.19■■■□□ 2.26
UPK3B-205ENST00000490360 RGPD1P0DJD0 1748 aa29.18■■■□□ 2.26
UPK3B-205ENST00000490360 HRCP23327 699 aa29.18■■■□□ 2.26
UPK3B-205ENST00000490360 ALS2Q96Q42 1657 aa29.17■■■□□ 2.26
UPK3B-205ENST00000490360 PSDA5PKW4 1024 aaPredicted RBP29.14■■■□□ 2.26
UPK3B-205ENST00000490360 SPATA31A5Q5VU36 1347 aa29.14■■■□□ 2.25
UPK3B-205ENST00000490360 SPATA31A7Q8IWB4 1347 aa29.14■■■□□ 2.25
UPK3B-205ENST00000490360 DISP2A7MBM2 1401 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms