RNA–Protein interactions for RNA: ENST00000490359.2

LRCH4-208, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-208ENST00000490359 PHLPP1O60346 1717 aa24.38■■□□□ 1.49
LRCH4-208ENST00000490359 RGS17Q9UGC6 210 aaPredicted RBP24.37■■□□□ 1.49
LRCH4-208ENST00000490359 MST1RQ04912 1400 aa24.36■■□□□ 1.49
LRCH4-208ENST00000490359 WAPLQ7Z5K2 1190 aa24.35■■□□□ 1.49
LRCH4-208ENST00000490359 KNDC1Q76NI1 1749 aa24.33■■□□□ 1.49
LRCH4-208ENST00000490359 POTEAQ6S8J7 498 aa24.33■■□□□ 1.49
LRCH4-208ENST00000490359 PLEKHH1Q9ULM0 1364 aa24.3■■□□□ 1.48
LRCH4-208ENST00000490359 RXRBP28702 533 aa24.29■■□□□ 1.48
LRCH4-208ENST00000490359 SIRT1Q96EB6 747 aa24.29■■□□□ 1.48
LRCH4-208ENST00000490359 C1orf167Q5SNV9 1468 aa24.28■■□□□ 1.48
LRCH4-208ENST00000490359 SIN3AQ96ST3 1273 aa24.28■■□□□ 1.48
LRCH4-208ENST00000490359 ADGRB1O14514 1584 aa24.27■■□□□ 1.48
LRCH4-208ENST00000490359 AHDC1Q5TGY3 1603 aaPredicted RBP24.27■■□□□ 1.48
LRCH4-208ENST00000490359 CDC42BPGQ6DT37 1551 aa24.26■■□□□ 1.47
LRCH4-208ENST00000490359 NEUROD1Q13562 356 aa24.25■■□□□ 1.47
LRCH4-208ENST00000490359 PRAM1Q96QH2 718 aa24.25■■□□□ 1.47
LRCH4-208ENST00000490359 COL16A1Q07092 1604 aaPredicted RBP24.24■■□□□ 1.47
LRCH4-208ENST00000490359 ESCO1Q5FWF5 840 aa24.24■■□□□ 1.47
LRCH4-208ENST00000490359 TRAK1Q9UPV9 953 aa24.24■■□□□ 1.47
LRCH4-208ENST00000490359 SAFB2Q14151 953 aaKnown RBP eCLIP24.23■■□□□ 1.47
LRCH4-208ENST00000490359 NGLY1Q96IV0 654 aa24.23■■□□□ 1.47
LRCH4-208ENST00000490359 POGKQ9P215 609 aa24.23■■□□□ 1.47
LRCH4-208ENST00000490359 DLC1Q96QB1 1528 aa24.22■■□□□ 1.47
LRCH4-208ENST00000490359 ORAI2Q96SN7 254 aa24.22■■□□□ 1.47
LRCH4-208ENST00000490359 L3MBTL2Q969R5 705 aa24.21■■□□□ 1.47
LRCH4-208ENST00000490359 C8orf37Q96NL8 207 aa24.21■■□□□ 1.47
LRCH4-208ENST00000490359 DDX17Q92841 729 aaKnown RBP24.2■■□□□ 1.46
LRCH4-208ENST00000490359 NPHP3Q7Z494 1330 aa24.19■■□□□ 1.46
LRCH4-208ENST00000490359 NUTM2FA1L443 756 aa24.19■■□□□ 1.46
LRCH4-208ENST00000490359 NHSL1Q5SYE7 1610 aa24.17■■□□□ 1.46
LRCH4-208ENST00000490359 AFF2P51816 1311 aa24.17■■□□□ 1.46
LRCH4-208ENST00000490359 ADAMTS2O95450 1211 aa24.17■■□□□ 1.46
LRCH4-208ENST00000490359 QTRT2Q9H974 415 aaKnown RBP24.15■■□□□ 1.46
LRCH4-208ENST00000490359 KIAA1210Q9ULL0 1709 aa24.13■■□□□ 1.45
LRCH4-208ENST00000490359 NBPF1Q3BBV0 1214 aa24.13■■□□□ 1.45
LRCH4-208ENST00000490359 FMN2Q9NZ56 1722 aa24.13■■□□□ 1.45
LRCH4-208ENST00000490359 RBM6P78332 1123 aaKnown RBP24.12■■□□□ 1.45
LRCH4-208ENST00000490359 SHPRHQ149N8 1683 aa24.11■■□□□ 1.45
LRCH4-208ENST00000490359 MINK1Q8N4C8 1332 aaPredicted RBP24.11■■□□□ 1.45
LRCH4-208ENST00000490359 HAP1P54257 671 aaPredicted RBP24.11■■□□□ 1.45
LRCH4-208ENST00000490359 HIRIP3Q9BW71 556 aaPredicted RBP24.11■■□□□ 1.45
LRCH4-208ENST00000490359 SOS2Q07890 1332 aaPredicted RBP24.1■■□□□ 1.45
LRCH4-208ENST00000490359 FOXO3O43524 673 aa24.1■■□□□ 1.45
LRCH4-208ENST00000490359 PSME1Q06323 249 aa24.1■■□□□ 1.45
LRCH4-208ENST00000490359 PNPLA6Q8IY17 1366 aa24.1■■□□□ 1.45
LRCH4-208ENST00000490359 LRP6O75581 1613 aa24.09■■□□□ 1.45
LRCH4-208ENST00000490359 USP21Q9UK80 565 aa24.08■■□□□ 1.45
LRCH4-208ENST00000490359 ADGRB2O60241 1585 aa24.08■■□□□ 1.44
LRCH4-208ENST00000490359 ARHGEF28Q8N1W1 1705 aaKnown RBP24.07■■□□□ 1.44
LRCH4-208ENST00000490359 PCGF6Q9BYE7 350 aa24.06■■□□□ 1.44
LRCH4-208ENST00000490359 TRPC5Q9UL62 973 aaPredicted RBP24.06■■□□□ 1.44
LRCH4-208ENST00000490359 TONSLQ96HA7 1378 aa24.04■■□□□ 1.44
LRCH4-208ENST00000490359 XPCQ01831 940 aaPredicted RBP24.04■■□□□ 1.44
LRCH4-208ENST00000490359 EIF3AQ14152 1382 aaKnown RBP24.03■■□□□ 1.44
LRCH4-208ENST00000490359 ANKARQ7Z5J8 1434 aa24.03■■□□□ 1.44
LRCH4-208ENST00000490359 WASLO00401 505 aaPredicted RBP24.03■■□□□ 1.44
LRCH4-208ENST00000490359 PHF8Q9UPP1 1060 aa24.03■■□□□ 1.44
LRCH4-208ENST00000490359 PXDNQ92626 1479 aa24.02■■□□□ 1.44
LRCH4-208ENST00000490359 KIF1AQ12756 1690 aa24.02■■□□□ 1.44
LRCH4-208ENST00000490359 ROCK2O75116 1388 aaKnown RBP24■■□□□ 1.43
LRCH4-208ENST00000490359 CDK12Q9NYV4 1490 aaPredicted RBP24■■□□□ 1.43
LRCH4-208ENST00000490359 TRPM1Q7Z4N2 1603 aa23.99■■□□□ 1.43
LRCH4-208ENST00000490359 RGPD8O14715 1765 aaPredicted RBP23.99■■□□□ 1.43
LRCH4-208ENST00000490359 NBPF8Q3BBV2 869 aa23.99■■□□□ 1.43
LRCH4-208ENST00000490359 LMOD2Q6P5Q4 547 aa23.99■■□□□ 1.43
LRCH4-208ENST00000490359 KRT28Q7Z3Y7 464 aa23.99■■□□□ 1.43
LRCH4-208ENST00000490359 TULP4Q9NRJ4 1543 aa23.99■■□□□ 1.43
LRCH4-208ENST00000490359 UPF1Q92900 1129 aaKnown RBP eCLIP23.98■■□□□ 1.43
LRCH4-208ENST00000490359 PRR36Q9H6K5 1346 aa23.98■■□□□ 1.43
LRCH4-208ENST00000490359 CENPJQ9HC77 1338 aaPredicted RBP23.98■■□□□ 1.43
LRCH4-208ENST00000490359 USP32Q8NFA0 1604 aa23.98■■□□□ 1.43
LRCH4-208ENST00000490359 PMFBP1Q8TBY8 1022 aa23.97■■□□□ 1.43
LRCH4-208ENST00000490359 FNBP4Q8N3X1 1017 aaPredicted RBP23.96■■□□□ 1.43
LRCH4-208ENST00000490359 CDK19Q9BWU1 502 aa23.95■■□□□ 1.42
LRCH4-208ENST00000490359 NUDT16Q96DE0 195 aaKnown RBP23.93■■□□□ 1.42
LRCH4-208ENST00000490359 SPATA31A3Q5VYP0 1347 aa23.91■■□□□ 1.42
LRCH4-208ENST00000490359 GPRASP1Q5JY77 1395 aa23.91■■□□□ 1.42
LRCH4-208ENST00000490359 ATAD2Q6PL18 1390 aa23.91■■□□□ 1.42
LRCH4-208ENST00000490359 ATP7BP35670 1465 aa23.9■■□□□ 1.42
LRCH4-208ENST00000490359 COL22A1Q8NFW1 1626 aaPredicted RBP23.89■■□□□ 1.42
LRCH4-208ENST00000490359 NGDNQ8NEJ9 315 aaKnown RBP23.89■■□□□ 1.41
LRCH4-208ENST00000490359 TNS3Q68CZ2 1445 aa23.88■■□□□ 1.41
LRCH4-208ENST00000490359 CCDC9Q9Y3X0 531 aaKnown RBP23.88■■□□□ 1.41
LRCH4-208ENST00000490359 QRICH2Q9H0J4 1663 aa23.88■■□□□ 1.41
LRCH4-208ENST00000490359 SBNO1A3KN83 1393 aa23.88■■□□□ 1.41
LRCH4-208ENST00000490359 RALGAPBQ86X10 1494 aa23.87■■□□□ 1.41
LRCH4-208ENST00000490359 SRPK2P78362 688 aaKnown RBP23.87■■□□□ 1.41
LRCH4-208ENST00000490359 CARD11Q9BXL7 1154 aa23.87■■□□□ 1.41
LRCH4-208ENST00000490359 ARHGEF10O15013 1369 aa23.87■■□□□ 1.41
LRCH4-208ENST00000490359 PLEKHG5O94827 1062 aa23.86■■□□□ 1.41
LRCH4-208ENST00000490359 CCDC125Q86Z20 511 aa23.86■■□□□ 1.41
LRCH4-208ENST00000490359 UNC5CLQ8IV45 518 aa23.85■■□□□ 1.41
LRCH4-208ENST00000490359 GJD4Q96KN9 370 aaPredicted RBP23.85■■□□□ 1.41
LRCH4-208ENST00000490359 CCDC61Q9Y6R9 512 aa23.85■■□□□ 1.41
LRCH4-208ENST00000490359 CLSPNQ9HAW4 1339 aa23.84■■□□□ 1.41
LRCH4-208ENST00000490359 ITSN1Q15811 1721 aa23.84■■□□□ 1.41
LRCH4-208ENST00000490359 CABP2Q9NPB3 220 aa23.83■■□□□ 1.41
LRCH4-208ENST00000490359 EVC2Q86UK5 1308 aa23.82■■□□□ 1.4
LRCH4-208ENST00000490359 PAK3O75914 559 aaPredicted RBP23.81■■□□□ 1.4
LRCH4-208ENST00000490359 SF3B2Q13435 895 aaKnown RBP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms