RNA–Protein interactions for RNA: ENST00000489839.1

GABBR1-217, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 407 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-217ENST00000489839 PNPLA6Q8IY17 1366 aa16.39■□□□□ 0.21
GABBR1-217ENST00000489839 CDC42BPGQ6DT37 1551 aa16.38■□□□□ 0.21
GABBR1-217ENST00000489839 CFAP70Q5T0N1 1121 aa16.38■□□□□ 0.21
GABBR1-217ENST00000489839 MEX3CQ5U5Q3 659 aaKnown RBP16.38■□□□□ 0.21
GABBR1-217ENST00000489839 ABCC11Q96J66 1382 aa16.38■□□□□ 0.21
GABBR1-217ENST00000489839 YTHDC2Q9H6S0 1430 aaKnown RBP16.37■□□□□ 0.21
GABBR1-217ENST00000489839 LRRC59Q96AG4 307 aaKnown RBP16.37■□□□□ 0.21
GABBR1-217ENST00000489839 C14orf93Q9H972 538 aaKnown RBP16.37■□□□□ 0.21
GABBR1-217ENST00000489839 NUTM2FA1L443 756 aa16.36■□□□□ 0.21
GABBR1-217ENST00000489839 SOS2Q07890 1332 aaPredicted RBP16.36■□□□□ 0.21
GABBR1-217ENST00000489839 MYOM2P54296 1465 aa16.35■□□□□ 0.21
GABBR1-217ENST00000489839 ACIN1Q9UKV3 1341 aaKnown RBP16.35■□□□□ 0.21
GABBR1-217ENST00000489839 FMN2Q9NZ56 1722 aa16.33■□□□□ 0.21
GABBR1-217ENST00000489839 RGPD8O14715 1765 aaPredicted RBP16.33■□□□□ 0.21
GABBR1-217ENST00000489839 ESCO1Q5FWF5 840 aa16.33■□□□□ 0.2
GABBR1-217ENST00000489839 AFF2P51816 1311 aa16.32■□□□□ 0.2
GABBR1-217ENST00000489839 XPCQ01831 940 aaPredicted RBP16.32■□□□□ 0.2
GABBR1-217ENST00000489839 PXDNQ92626 1479 aa16.31■□□□□ 0.2
GABBR1-217ENST00000489839 ZNF772Q68DY9 489 aaPredicted RBP16.31■□□□□ 0.2
GABBR1-217ENST00000489839 FOXO3O43524 673 aa16.3■□□□□ 0.2
GABBR1-217ENST00000489839 C8orf37Q96NL8 207 aa16.3■□□□□ 0.2
GABBR1-217ENST00000489839 ADGRB1O14514 1584 aa16.3■□□□□ 0.2
GABBR1-217ENST00000489839 ADAMTS2O95450 1211 aa16.29■□□□□ 0.2
GABBR1-217ENST00000489839 HRCP23327 699 aa16.29■□□□□ 0.2
GABBR1-217ENST00000489839 SAFB2Q14151 953 aaKnown RBP eCLIP16.29■□□□□ 0.2
GABBR1-217ENST00000489839 SIRT1Q96EB6 747 aa16.29■□□□□ 0.2
GABBR1-217ENST00000489839 KDM2AQ9Y2K7 1162 aa16.29■□□□□ 0.2
GABBR1-217ENST00000489839 DHX57Q6P158 1386 aaKnown RBP16.28■□□□□ 0.2
GABBR1-217ENST00000489839 COL22A1Q8NFW1 1626 aaPredicted RBP16.28■□□□□ 0.2
GABBR1-217ENST00000489839 DCAF11Q8TEB1 546 aa16.27■□□□□ 0.2
GABBR1-217ENST00000489839 PRAM1Q96QH2 718 aa16.27■□□□□ 0.2
GABBR1-217ENST00000489839 NPHP3Q7Z494 1330 aa16.26■□□□□ 0.19
GABBR1-217ENST00000489839 DLC1Q96QB1 1528 aa16.25■□□□□ 0.19
GABBR1-217ENST00000489839 RXRBP28702 533 aa16.25■□□□□ 0.19
GABBR1-217ENST00000489839 USP32Q8NFA0 1604 aa16.25■□□□□ 0.19
GABBR1-217ENST00000489839 NGLY1Q96IV0 654 aa16.23■□□□□ 0.19
GABBR1-217ENST00000489839 QTRT2Q9H974 415 aaKnown RBP16.23■□□□□ 0.19
GABBR1-217ENST00000489839 TRAK1Q9UPV9 953 aa16.23■□□□□ 0.19
GABBR1-217ENST00000489839 KIF1AQ12756 1690 aa16.23■□□□□ 0.19
GABBR1-217ENST00000489839 MARF1Q9Y4F3 1742 aaKnown RBP16.22■□□□□ 0.19
GABBR1-217ENST00000489839 HIRIP3Q9BW71 556 aaPredicted RBP16.21■□□□□ 0.19
GABBR1-217ENST00000489839 RGS12O14924 1447 aa16.2■□□□□ 0.18
GABBR1-217ENST00000489839 POGKQ9P215 609 aa16.2■□□□□ 0.18
GABBR1-217ENST00000489839 PHF8Q9UPP1 1060 aa16.2■□□□□ 0.18
GABBR1-217ENST00000489839 CDK12Q9NYV4 1490 aaPredicted RBP16.2■□□□□ 0.18
GABBR1-217ENST00000489839 ADGRB2O60241 1585 aa16.2■□□□□ 0.18
GABBR1-217ENST00000489839 SPATA31A3Q5VYP0 1347 aa16.19■□□□□ 0.18
GABBR1-217ENST00000489839 KRT28Q7Z3Y7 464 aa16.19■□□□□ 0.18
GABBR1-217ENST00000489839 UPF1Q92900 1129 aaKnown RBP eCLIP16.19■□□□□ 0.18
GABBR1-217ENST00000489839 ARHGEF28Q8N1W1 1705 aaKnown RBP16.19■□□□□ 0.18
GABBR1-217ENST00000489839 MINK1Q8N4C8 1332 aaPredicted RBP16.19■□□□□ 0.18
GABBR1-217ENST00000489839 PRR36Q9H6K5 1346 aa16.19■□□□□ 0.18
GABBR1-217ENST00000489839 RBM6P78332 1123 aaKnown RBP16.18■□□□□ 0.18
GABBR1-217ENST00000489839 FNBP4Q8N3X1 1017 aaPredicted RBP16.18■□□□□ 0.18
GABBR1-217ENST00000489839 USP21Q9UK80 565 aa16.18■□□□□ 0.18
GABBR1-217ENST00000489839 PMFBP1Q8TBY8 1022 aa16.17■□□□□ 0.18
GABBR1-217ENST00000489839 BCL9LQ86UU0 1499 aa16.16■□□□□ 0.18
GABBR1-217ENST00000489839 ATRNO75882 1429 aa16.16■□□□□ 0.18
GABBR1-217ENST00000489839 CABLES1Q8TDN4 633 aa16.15■□□□□ 0.18
GABBR1-217ENST00000489839 ABCA3Q99758 1704 aa16.14■□□□□ 0.17
GABBR1-217ENST00000489839 TRPM3Q9HCF6 1732 aaPredicted RBP16.14■□□□□ 0.17
GABBR1-217ENST00000489839 TNS3Q68CZ2 1445 aa16.14■□□□□ 0.17
GABBR1-217ENST00000489839 ANKARQ7Z5J8 1434 aa16.14■□□□□ 0.17
GABBR1-217ENST00000489839 PLEKHG5O94827 1062 aa16.14■□□□□ 0.17
GABBR1-217ENST00000489839 NBPF1Q3BBV0 1214 aa16.13■□□□□ 0.17
GABBR1-217ENST00000489839 STAC3Q96MF2 364 aa16.13■□□□□ 0.17
GABBR1-217ENST00000489839 WASLO00401 505 aaPredicted RBP16.12■□□□□ 0.17
GABBR1-217ENST00000489839 TRPC5Q9UL62 973 aaPredicted RBP16.12■□□□□ 0.17
GABBR1-217ENST00000489839 TULP4Q9NRJ4 1543 aa16.12■□□□□ 0.17
GABBR1-217ENST00000489839 SLIT2O94813 1529 aa16.11■□□□□ 0.17
GABBR1-217ENST00000489839 PSME1Q06323 249 aa16.11■□□□□ 0.17
GABBR1-217ENST00000489839 SBNO1A3KN83 1393 aa16.11■□□□□ 0.17
GABBR1-217ENST00000489839 KIAA1210Q9ULL0 1709 aa16.11■□□□□ 0.17
GABBR1-217ENST00000489839 ALS2Q96Q42 1657 aa16.1■□□□□ 0.17
GABBR1-217ENST00000489839 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.1■□□□□ 0.17
GABBR1-217ENST00000489839 LMOD2Q6P5Q4 547 aa16.09■□□□□ 0.17
GABBR1-217ENST00000489839 SIN3AQ96ST3 1273 aa16.09■□□□□ 0.17
GABBR1-217ENST00000489839 GLI3P10071 1580 aa16.09■□□□□ 0.17
GABBR1-217ENST00000489839 ATP7BP35670 1465 aa16.08■□□□□ 0.16
GABBR1-217ENST00000489839 PLCH1Q4KWH8 1693 aa16.08■□□□□ 0.16
GABBR1-217ENST00000489839 CRYBG1Q9Y4K1 1723 aa16.06■□□□□ 0.16
GABBR1-217ENST00000489839 UNC5CLQ8IV45 518 aa16.06■□□□□ 0.16
GABBR1-217ENST00000489839 L3MBTL2Q969R5 705 aa16.06■□□□□ 0.16
GABBR1-217ENST00000489839 NUDT16Q96DE0 195 aaKnown RBP16.06■□□□□ 0.16
GABBR1-217ENST00000489839 GJD4Q96KN9 370 aaPredicted RBP16.06■□□□□ 0.16
GABBR1-217ENST00000489839 RALGAPBQ86X10 1494 aa16.05■□□□□ 0.16
GABBR1-217ENST00000489839 ARHGEF10O15013 1369 aa16.05■□□□□ 0.16
GABBR1-217ENST00000489839 CDK19Q9BWU1 502 aa16.05■□□□□ 0.16
GABBR1-217ENST00000489839 BRWD3Q6RI45 1802 aa16.05■□□□□ 0.16
GABBR1-217ENST00000489839 TOPAZ1Q8N9V7 1692 aa16.05■□□□□ 0.16
GABBR1-217ENST00000489839 FAM83GA6ND36 823 aa16.04■□□□□ 0.16
GABBR1-217ENST00000489839 ITSN1Q15811 1721 aa16.04■□□□□ 0.16
GABBR1-217ENST00000489839 EIF3AQ14152 1382 aaKnown RBP16.03■□□□□ 0.16
GABBR1-217ENST00000489839 NWD2Q9ULI1 1742 aa16.03■□□□□ 0.16
GABBR1-217ENST00000489839 HAP1P54257 671 aaPredicted RBP16.03■□□□□ 0.16
GABBR1-217ENST00000489839 NGDNQ8NEJ9 315 aaKnown RBP16.03■□□□□ 0.16
GABBR1-217ENST00000489839 GPRASP1Q5JY77 1395 aa16.02■□□□□ 0.16
GABBR1-217ENST00000489839 NRAPQ86VF7 1730 aa16.02■□□□□ 0.15
GABBR1-217ENST00000489839 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
GABBR1-217ENST00000489839 NEUROD1Q13562 356 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms