RNA–Protein interactions for RNA: ENST00000489555.1

PRUNE2-213, Transcript of prune homolog 2, humanhuman

TSL 3

Gene PRUNE2, Length 635 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-213ENST00000489555 BCL9LQ86UU0 1499 aa11.51□□□□□ -0.57
PRUNE2-213ENST00000489555 CLTCL1P53675 1640 aa11.5□□□□□ -0.57
PRUNE2-213ENST00000489555 DDX17Q92841 729 aaKnown RBP11.5□□□□□ -0.57
PRUNE2-213ENST00000489555 HFM1A2PYH4 1435 aa11.5□□□□□ -0.57
PRUNE2-213ENST00000489555 BLMP54132 1417 aaPredicted RBP11.5□□□□□ -0.57
PRUNE2-213ENST00000489555 PXDNQ92626 1479 aa11.49□□□□□ -0.57
PRUNE2-213ENST00000489555 NWD2Q9ULI1 1742 aa11.49□□□□□ -0.57
PRUNE2-213ENST00000489555 PPLO60437 1756 aa11.49□□□□□ -0.57
PRUNE2-213ENST00000489555 LOC105371045A0A1W2PR82 267 aa11.48□□□□□ -0.57
PRUNE2-213ENST00000489555 NPHP3Q7Z494 1330 aa11.48□□□□□ -0.57
PRUNE2-213ENST00000489555 KIF1AQ12756 1690 aa11.47□□□□□ -0.57
PRUNE2-213ENST00000489555 GLI3P10071 1580 aa11.47□□□□□ -0.57
PRUNE2-213ENST00000489555 ZNF326Q5BKZ1 582 aaKnown RBP11.47□□□□□ -0.57
PRUNE2-213ENST00000489555 ROBO2Q9HCK4 1378 aa11.46□□□□□ -0.57
PRUNE2-213ENST00000489555 GJD4Q96KN9 370 aaPredicted RBP11.46□□□□□ -0.57
PRUNE2-213ENST00000489555 USP32Q8NFA0 1604 aa11.46□□□□□ -0.58
PRUNE2-213ENST00000489555 SLIT2O94813 1529 aa11.45□□□□□ -0.58
PRUNE2-213ENST00000489555 LRPPRCP42704 1394 aaKnown RBP11.45□□□□□ -0.58
PRUNE2-213ENST00000489555 ORAI2Q96SN7 254 aa11.45□□□□□ -0.58
PRUNE2-213ENST00000489555 KNDC1Q76NI1 1749 aa11.45□□□□□ -0.58
PRUNE2-213ENST00000489555 RALGAPBQ86X10 1494 aa11.44□□□□□ -0.58
PRUNE2-213ENST00000489555 PLCH1Q4KWH8 1693 aa11.43□□□□□ -0.58
PRUNE2-213ENST00000489555 VGFO15240 615 aaPredicted RBP11.43□□□□□ -0.58
PRUNE2-213ENST00000489555 FMN2Q9NZ56 1722 aa11.43□□□□□ -0.58
PRUNE2-213ENST00000489555 RPGRIP1LQ68CZ1 1315 aa11.42□□□□□ -0.58
PRUNE2-213ENST00000489555 UNC5CLQ8IV45 518 aa11.42□□□□□ -0.58
PRUNE2-213ENST00000489555 ABCA3Q99758 1704 aa11.42□□□□□ -0.58
PRUNE2-213ENST00000489555 RGPD1P0DJD0 1748 aa11.41□□□□□ -0.58
PRUNE2-213ENST00000489555 TECPR2O15040 1411 aa11.41□□□□□ -0.58
PRUNE2-213ENST00000489555 SF3B2Q13435 895 aaKnown RBP11.4□□□□□ -0.58
PRUNE2-213ENST00000489555 CCDC144AA2RUR9 1427 aa11.4□□□□□ -0.58
PRUNE2-213ENST00000489555 ESCO1Q5FWF5 840 aa11.39□□□□□ -0.59
PRUNE2-213ENST00000489555 IFT172Q9UG01 1749 aa11.39□□□□□ -0.59
PRUNE2-213ENST00000489555 RGPD8O14715 1765 aaPredicted RBP11.39□□□□□ -0.59
PRUNE2-213ENST00000489555 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
PRUNE2-213ENST00000489555 SPATA31A3Q5VYP0 1347 aa11.37□□□□□ -0.59
PRUNE2-213ENST00000489555 NAIPQ13075 1403 aa11.37□□□□□ -0.59
PRUNE2-213ENST00000489555 NRAPQ86VF7 1730 aa11.37□□□□□ -0.59
PRUNE2-213ENST00000489555 FOXO3O43524 673 aa11.36□□□□□ -0.59
PRUNE2-213ENST00000489555 VPS72Q15906 364 aa11.36□□□□□ -0.59
PRUNE2-213ENST00000489555 DEFB132Q7Z7B7 95 aa11.36□□□□□ -0.59
PRUNE2-213ENST00000489555 TNS1Q9HBL0 1735 aaKnown RBP11.35□□□□□ -0.59
PRUNE2-213ENST00000489555 TNS3Q68CZ2 1445 aa11.35□□□□□ -0.59
PRUNE2-213ENST00000489555 SEPT12Q8IYM1 358 aa11.34□□□□□ -0.59
PRUNE2-213ENST00000489555 DISP2A7MBM2 1401 aa11.34□□□□□ -0.59
PRUNE2-213ENST00000489555 ABCC11Q96J66 1382 aa11.33□□□□□ -0.6
PRUNE2-213ENST00000489555 HRCP23327 699 aa11.33□□□□□ -0.6
PRUNE2-213ENST00000489555 BAG6P46379 1132 aa11.33□□□□□ -0.6
PRUNE2-213ENST00000489555 KRT27Q7Z3Y8 459 aa11.33□□□□□ -0.6
PRUNE2-213ENST00000489555 SBNO1A3KN83 1393 aa11.32□□□□□ -0.6
PRUNE2-213ENST00000489555 ARHGEF10O15013 1369 aa11.32□□□□□ -0.6
PRUNE2-213ENST00000489555 COL14A1Q05707 1796 aaKnown RBP11.32□□□□□ -0.6
PRUNE2-213ENST00000489555 RRBP1Q9P2E9 1410 aaKnown RBP11.32□□□□□ -0.6
PRUNE2-213ENST00000489555 ADGRB2O60241 1585 aa11.32□□□□□ -0.6
PRUNE2-213ENST00000489555 THSD7AQ9UPZ6 1657 aa11.31□□□□□ -0.6
PRUNE2-213ENST00000489555 XPCQ01831 940 aaPredicted RBP11.31□□□□□ -0.6
PRUNE2-213ENST00000489555 NRXN1Q9ULB1 1477 aa11.31□□□□□ -0.6
PRUNE2-213ENST00000489555 ANKRD30BQ9BXX2 1392 aa11.3□□□□□ -0.6
PRUNE2-213ENST00000489555 TRPM3Q9HCF6 1732 aaPredicted RBP11.3□□□□□ -0.6
PRUNE2-213ENST00000489555 PSME1Q06323 249 aa11.3□□□□□ -0.6
PRUNE2-213ENST00000489555 SIRT1Q96EB6 747 aa11.3□□□□□ -0.6
PRUNE2-213ENST00000489555 ALS2Q96Q42 1657 aa11.3□□□□□ -0.6
PRUNE2-213ENST00000489555 CRYBG1Q9Y4K1 1723 aa11.29□□□□□ -0.6
PRUNE2-213ENST00000489555 KRT28Q7Z3Y7 464 aa11.29□□□□□ -0.6
PRUNE2-213ENST00000489555 PIK3C2GO75747 1445 aa11.28□□□□□ -0.6
PRUNE2-213ENST00000489555 RREB1Q92766 1687 aa11.28□□□□□ -0.6
PRUNE2-213ENST00000489555 HAP1P54257 671 aaPredicted RBP11.28□□□□□ -0.6
PRUNE2-213ENST00000489555 PARD3Q8TEW0 1356 aa11.28□□□□□ -0.6
PRUNE2-213ENST00000489555 YTHDC2Q9H6S0 1430 aaKnown RBP11.27□□□□□ -0.6
PRUNE2-213ENST00000489555 PSDA5PKW4 1024 aaPredicted RBP11.27□□□□□ -0.61
PRUNE2-213ENST00000489555 ITGAEP38570 1179 aa11.27□□□□□ -0.61
PRUNE2-213ENST00000489555 SPATA31E1Q6ZUB1 1445 aa11.26□□□□□ -0.61
PRUNE2-213ENST00000489555 ANKARQ7Z5J8 1434 aa11.26□□□□□ -0.61
PRUNE2-213ENST00000489555 WAPLQ7Z5K2 1190 aa11.26□□□□□ -0.61
PRUNE2-213ENST00000489555 PHF8Q9UPP1 1060 aa11.26□□□□□ -0.61
PRUNE2-213ENST00000489555 CCDC9Q9Y3X0 531 aaKnown RBP11.25□□□□□ -0.61
PRUNE2-213ENST00000489555 ADGRF5Q8IZF2 1346 aa11.25□□□□□ -0.61
PRUNE2-213ENST00000489555 PLEKHH1Q9ULM0 1364 aa11.25□□□□□ -0.61
PRUNE2-213ENST00000489555 NUP188Q5SRE5 1749 aa11.24□□□□□ -0.61
PRUNE2-213ENST00000489555 NUTM2FA1L443 756 aa11.24□□□□□ -0.61
PRUNE2-213ENST00000489555 DLC1Q96QB1 1528 aa11.24□□□□□ -0.61
PRUNE2-213ENST00000489555 RGPD3A6NKT7 1758 aaPredicted RBP11.23□□□□□ -0.61
PRUNE2-213ENST00000489555 RGPD4Q7Z3J3 1758 aa11.23□□□□□ -0.61
PRUNE2-213ENST00000489555 FAM83GA6ND36 823 aa11.23□□□□□ -0.61
PRUNE2-213ENST00000489555 SLC4A1APQ9BWU0 796 aaKnown RBP11.23□□□□□ -0.61
PRUNE2-213ENST00000489555 STK26Q9P289 416 aa11.23□□□□□ -0.61
PRUNE2-213ENST00000489555 ITSN1Q15811 1721 aa11.23□□□□□ -0.61
PRUNE2-213ENST00000489555 EN1Q05925 392 aaPredicted RBP11.22□□□□□ -0.61
PRUNE2-213ENST00000489555 R3HDM1Q15032 1099 aaKnown RBP11.22□□□□□ -0.61
PRUNE2-213ENST00000489555 FAM98CQ17RN3 349 aaKnown RBP11.22□□□□□ -0.61
PRUNE2-213ENST00000489555 SPATA31A5Q5VU36 1347 aa11.22□□□□□ -0.61
PRUNE2-213ENST00000489555 SPATA31A7Q8IWB4 1347 aa11.22□□□□□ -0.61
PRUNE2-213ENST00000489555 CABLES1Q8TDN4 633 aa11.22□□□□□ -0.61
PRUNE2-213ENST00000489555 EIF3AQ14152 1382 aaKnown RBP11.21□□□□□ -0.61
PRUNE2-213ENST00000489555 A0A0G2JS52 829 aa11.21□□□□□ -0.61
PRUNE2-213ENST00000489555 MYT1Q01538 1121 aa11.21□□□□□ -0.61
PRUNE2-213ENST00000489555 BTG4Q9NY30 223 aa11.21□□□□□ -0.61
PRUNE2-213ENST00000489555 PHRF1Q9P1Y6 1649 aaKnown RBP11.2□□□□□ -0.62
PRUNE2-213ENST00000489555 DHX57Q6P158 1386 aaKnown RBP11.19□□□□□ -0.62
PRUNE2-213ENST00000489555 TMEM132EQ6IEE7 984 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms