RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 COL22A1Q8NFW1 1626 aaPredicted RBP15.56■□□□□ 0.08
CHKB-211ENST00000489453 SOS2Q07890 1332 aaPredicted RBP15.55■□□□□ 0.08
CHKB-211ENST00000489453 ESCO1Q5FWF5 840 aa15.54■□□□□ 0.08
CHKB-211ENST00000489453 KNDC1Q76NI1 1749 aa15.54■□□□□ 0.08
CHKB-211ENST00000489453 NPHP3Q7Z494 1330 aa15.53■□□□□ 0.08
CHKB-211ENST00000489453 FOXD1Q16676 465 aa15.53■□□□□ 0.08
CHKB-211ENST00000489453 USP21Q9UK80 565 aa15.53■□□□□ 0.08
CHKB-211ENST00000489453 STK26Q9P289 416 aa15.52■□□□□ 0.08
CHKB-211ENST00000489453 TRPC5Q9UL62 973 aaPredicted RBP15.52■□□□□ 0.08
CHKB-211ENST00000489453 RGL3Q3MIN7 710 aa15.51■□□□□ 0.07
CHKB-211ENST00000489453 LRPPRCP42704 1394 aaKnown RBP15.5■□□□□ 0.07
CHKB-211ENST00000489453 ATAD2Q6PL18 1390 aa15.5■□□□□ 0.07
CHKB-211ENST00000489453 KIF1AQ12756 1690 aa15.5■□□□□ 0.07
CHKB-211ENST00000489453 ANKRD30BQ9BXX2 1392 aa15.49■□□□□ 0.07
CHKB-211ENST00000489453 ADGRF5Q8IZF2 1346 aa15.49■□□□□ 0.07
CHKB-211ENST00000489453 FMN2Q9NZ56 1722 aa15.49■□□□□ 0.07
CHKB-211ENST00000489453 PXDNQ92626 1479 aa15.48■□□□□ 0.07
CHKB-211ENST00000489453 NUTM2FA1L443 756 aa15.48■□□□□ 0.07
CHKB-211ENST00000489453 MYOM2P54296 1465 aa15.47■□□□□ 0.07
CHKB-211ENST00000489453 RGPD8O14715 1765 aaPredicted RBP15.47■□□□□ 0.07
CHKB-211ENST00000489453 TECPR2O15040 1411 aa15.47■□□□□ 0.07
CHKB-211ENST00000489453 ATRNO75882 1429 aa15.47■□□□□ 0.07
CHKB-211ENST00000489453 XPCQ01831 940 aaPredicted RBP15.47■□□□□ 0.07
CHKB-211ENST00000489453 WAPLQ7Z5K2 1190 aa15.47■□□□□ 0.07
CHKB-211ENST00000489453 SPATA31E1Q6ZUB1 1445 aa15.46■□□□□ 0.07
CHKB-211ENST00000489453 FOXO3O43524 673 aa15.46■□□□□ 0.07
CHKB-211ENST00000489453 FNBP4Q8N3X1 1017 aaPredicted RBP15.46■□□□□ 0.07
CHKB-211ENST00000489453 MPHOSPH9Q99550 1183 aa15.46■□□□□ 0.07
CHKB-211ENST00000489453 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.46■□□□□ 0.06
CHKB-211ENST00000489453 PIK3C2GO75747 1445 aa15.44■□□□□ 0.06
CHKB-211ENST00000489453 TMEM132EQ6IEE7 984 aa15.44■□□□□ 0.06
CHKB-211ENST00000489453 ABCC11Q96J66 1382 aa15.44■□□□□ 0.06
CHKB-211ENST00000489453 YTHDC2Q9H6S0 1430 aaKnown RBP15.43■□□□□ 0.06
CHKB-211ENST00000489453 PLEKHH1Q9ULM0 1364 aa15.42■□□□□ 0.06
CHKB-211ENST00000489453 HAP1P54257 671 aaPredicted RBP15.42■□□□□ 0.06
CHKB-211ENST00000489453 ACIN1Q9UKV3 1341 aaKnown RBP15.42■□□□□ 0.06
CHKB-211ENST00000489453 USP32Q8NFA0 1604 aa15.41■□□□□ 0.06
CHKB-211ENST00000489453 BCL9LQ86UU0 1499 aa15.4■□□□□ 0.06
CHKB-211ENST00000489453 DHX57Q6P158 1386 aaKnown RBP15.39■□□□□ 0.05
CHKB-211ENST00000489453 SPATA31A3Q5VYP0 1347 aa15.39■□□□□ 0.05
CHKB-211ENST00000489453 BRWD3Q6RI45 1802 aa15.38■□□□□ 0.05
CHKB-211ENST00000489453 PLCH1Q4KWH8 1693 aa15.38■□□□□ 0.05
CHKB-211ENST00000489453 KRT28Q7Z3Y7 464 aa15.38■□□□□ 0.05
CHKB-211ENST00000489453 GJD4Q96KN9 370 aaPredicted RBP15.38■□□□□ 0.05
CHKB-211ENST00000489453 ABCA3Q99758 1704 aa15.37■□□□□ 0.05
CHKB-211ENST00000489453 NWD2Q9ULI1 1742 aa15.37■□□□□ 0.05
CHKB-211ENST00000489453 EP400Q96L91 3159 aa15.37■□□□□ 0.05
CHKB-211ENST00000489453 PSME1Q06323 249 aa15.37■□□□□ 0.05
CHKB-211ENST00000489453 UNC5CLQ8IV45 518 aa15.37■□□□□ 0.05
CHKB-211ENST00000489453 ZRANB1Q9UGI0 708 aa15.37■□□□□ 0.05
CHKB-211ENST00000489453 TNS3Q68CZ2 1445 aa15.36■□□□□ 0.05
CHKB-211ENST00000489453 PLEKHG5O94827 1062 aa15.36■□□□□ 0.05
CHKB-211ENST00000489453 CCDC125Q86Z20 511 aa15.36■□□□□ 0.05
CHKB-211ENST00000489453 SIRT1Q96EB6 747 aa15.36■□□□□ 0.05
CHKB-211ENST00000489453 C14orf93Q9H972 538 aaKnown RBP15.36■□□□□ 0.05
CHKB-211ENST00000489453 PHF8Q9UPP1 1060 aa15.36■□□□□ 0.05
CHKB-211ENST00000489453 RALGAPBQ86X10 1494 aa15.35■□□□□ 0.05
CHKB-211ENST00000489453 SLIT2O94813 1529 aa15.35■□□□□ 0.05
CHKB-211ENST00000489453 SAFB2Q14151 953 aaKnown RBP eCLIP15.35■□□□□ 0.05
CHKB-211ENST00000489453 LMOD2Q6P5Q4 547 aa15.35■□□□□ 0.05
CHKB-211ENST00000489453 POGKQ9P215 609 aa15.35■□□□□ 0.05
CHKB-211ENST00000489453 GLI3P10071 1580 aa15.35■□□□□ 0.05
CHKB-211ENST00000489453 NRXN1Q9ULB1 1477 aa15.34■□□□□ 0.05
CHKB-211ENST00000489453 CFAP70Q5T0N1 1121 aa15.34■□□□□ 0.05
CHKB-211ENST00000489453 PRAM1Q96QH2 718 aa15.34■□□□□ 0.05
CHKB-211ENST00000489453 CCDC9Q9Y3X0 531 aaKnown RBP15.33■□□□□ 0.04
CHKB-211ENST00000489453 ARHGEF10O15013 1369 aa15.33■□□□□ 0.04
CHKB-211ENST00000489453 DLC1Q96QB1 1528 aa15.33■□□□□ 0.04
CHKB-211ENST00000489453 SBNO1A3KN83 1393 aa15.31■□□□□ 0.04
CHKB-211ENST00000489453 ANKARQ7Z5J8 1434 aa15.31■□□□□ 0.04
CHKB-211ENST00000489453 ADGRB2O60241 1585 aa15.31■□□□□ 0.04
CHKB-211ENST00000489453 SF3B2Q13435 895 aaKnown RBP15.3■□□□□ 0.04
CHKB-211ENST00000489453 CABLES1Q8TDN4 633 aa15.3■□□□□ 0.04
CHKB-211ENST00000489453 BLMP54132 1417 aaPredicted RBP15.29■□□□□ 0.04
CHKB-211ENST00000489453 EIF3AQ14152 1382 aaKnown RBP15.29■□□□□ 0.04
CHKB-211ENST00000489453 PMFBP1Q8TBY8 1022 aa15.29■□□□□ 0.04
CHKB-211ENST00000489453 TRPM3Q9HCF6 1732 aaPredicted RBP15.29■□□□□ 0.04
CHKB-211ENST00000489453 A0A0G2JS52 829 aa15.28■□□□□ 0.04
CHKB-211ENST00000489453 MYT1Q01538 1121 aa15.28■□□□□ 0.04
CHKB-211ENST00000489453 VPS72Q15906 364 aa15.28■□□□□ 0.04
CHKB-211ENST00000489453 ITSN1Q15811 1721 aa15.28■□□□□ 0.04
CHKB-211ENST00000489453 GPRASP1Q5JY77 1395 aa15.27■□□□□ 0.04
CHKB-211ENST00000489453 RAB3GAP2Q9H2M9 1393 aa15.27■□□□□ 0.04
CHKB-211ENST00000489453 SEPT12Q8IYM1 358 aa15.27■□□□□ 0.04
CHKB-211ENST00000489453 COL14A1Q05707 1796 aaKnown RBP15.26■□□□□ 0.03
CHKB-211ENST00000489453 NRAPQ86VF7 1730 aa15.26■□□□□ 0.03
CHKB-211ENST00000489453 ALS2Q96Q42 1657 aa15.26■□□□□ 0.03
CHKB-211ENST00000489453 HIRIP3Q9BW71 556 aaPredicted RBP15.26■□□□□ 0.03
CHKB-211ENST00000489453 TRAK1Q9UPV9 953 aa15.26■□□□□ 0.03
CHKB-211ENST00000489453 ADGRB1O14514 1584 aa15.26■□□□□ 0.03
CHKB-211ENST00000489453 MINK1Q8N4C8 1332 aaPredicted RBP15.25■□□□□ 0.03
CHKB-211ENST00000489453 KDM2AQ9Y2K7 1162 aa15.25■□□□□ 0.03
CHKB-211ENST00000489453 TULP4Q9NRJ4 1543 aa15.25■□□□□ 0.03
CHKB-211ENST00000489453 SRCAPQ6ZRS2 3230 aa15.24■□□□□ 0.03
CHKB-211ENST00000489453 ARHGEF28Q8N1W1 1705 aaKnown RBP15.23■□□□□ 0.03
CHKB-211ENST00000489453 KRT27Q7Z3Y8 459 aa15.23■□□□□ 0.03
CHKB-211ENST00000489453 DCAF11Q8TEB1 546 aa15.23■□□□□ 0.03
CHKB-211ENST00000489453 FAM83GA6ND36 823 aa15.22■□□□□ 0.03
CHKB-211ENST00000489453 NGDNQ8NEJ9 315 aaKnown RBP15.22■□□□□ 0.03
CHKB-211ENST00000489453 RGPD1P0DJD0 1748 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms