RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 SPATA31A6Q5VVP1 1343 aa27.64■■■□□ 2.01
MRPL55-230ENST00000489430 DLC1Q96QB1 1528 aa27.61■■■□□ 2.01
MRPL55-230ENST00000489430 LRRC59Q96AG4 307 aaKnown RBP27.6■■■□□ 2.01
MRPL55-230ENST00000489430 ADGRB1O14514 1584 aa27.6■■■□□ 2.01
MRPL55-230ENST00000489430 PLEKHH1Q9ULM0 1364 aa27.6■■■□□ 2.01
MRPL55-230ENST00000489430 NHSL1Q5SYE7 1610 aa27.58■■■□□ 2.01
MRPL55-230ENST00000489430 TRIM26Q12899 539 aaPredicted RBP27.57■■■□□ 2
MRPL55-230ENST00000489430 ORAI2Q96SN7 254 aa27.56■■■□□ 2
MRPL55-230ENST00000489430 PRAM1Q96QH2 718 aa27.55■■■□□ 2
MRPL55-230ENST00000489430 SOS2Q07890 1332 aaPredicted RBP27.54■■■□□ 2
MRPL55-230ENST00000489430 POGKQ9P215 609 aa27.53■■■□□ 2
MRPL55-230ENST00000489430 SHPRHQ149N8 1683 aa27.52■■■□□ 2
MRPL55-230ENST00000489430 ESCO1Q5FWF5 840 aa27.52■■■□□ 2
MRPL55-230ENST00000489430 NPHP3Q7Z494 1330 aa27.51■■□□□ 1.99
MRPL55-230ENST00000489430 SOCS7O14512 581 aa27.51■■□□□ 1.99
MRPL55-230ENST00000489430 RGS17Q9UGC6 210 aaPredicted RBP27.5■■□□□ 1.99
MRPL55-230ENST00000489430 TRAK1Q9UPV9 953 aa27.49■■□□□ 1.99
MRPL55-230ENST00000489430 DDX17Q92841 729 aaKnown RBP27.48■■□□□ 1.99
MRPL55-230ENST00000489430 PNPLA6Q8IY17 1366 aa27.46■■□□□ 1.99
MRPL55-230ENST00000489430 LRP6O75581 1613 aa27.44■■□□□ 1.98
MRPL55-230ENST00000489430 FMN2Q9NZ56 1722 aa27.44■■□□□ 1.98
MRPL55-230ENST00000489430 SAFB2Q14151 953 aaKnown RBP eCLIP27.43■■□□□ 1.98
MRPL55-230ENST00000489430 KIAA1210Q9ULL0 1709 aa27.43■■□□□ 1.98
MRPL55-230ENST00000489430 ADGRB2O60241 1585 aa27.43■■□□□ 1.98
MRPL55-230ENST00000489430 ANKARQ7Z5J8 1434 aa27.42■■□□□ 1.98
MRPL55-230ENST00000489430 FOXO3O43524 673 aa27.42■■□□□ 1.98
MRPL55-230ENST00000489430 MEX3CQ5U5Q3 659 aaKnown RBP27.42■■□□□ 1.98
MRPL55-230ENST00000489430 L3MBTL2Q969R5 705 aa27.42■■□□□ 1.98
MRPL55-230ENST00000489430 EIF3AQ14152 1382 aaKnown RBP27.42■■□□□ 1.98
MRPL55-230ENST00000489430 NUTM2FA1L443 756 aa27.41■■□□□ 1.98
MRPL55-230ENST00000489430 SIN3AQ96ST3 1273 aa27.4■■□□□ 1.98
MRPL55-230ENST00000489430 PXDNQ92626 1479 aa27.38■■□□□ 1.97
MRPL55-230ENST00000489430 KIF1AQ12756 1690 aa27.37■■□□□ 1.97
MRPL55-230ENST00000489430 ZNF772Q68DY9 489 aaPredicted RBP27.37■■□□□ 1.97
MRPL55-230ENST00000489430 PHF8Q9UPP1 1060 aa27.37■■□□□ 1.97
MRPL55-230ENST00000489430 NUTM2BA6NNL0 878 aaPredicted RBP27.36■■□□□ 1.97
MRPL55-230ENST00000489430 NUTM2EB1AL46 878 aaPredicted RBP27.36■■□□□ 1.97
MRPL55-230ENST00000489430 NUTM2AQ8IVF1 878 aaPredicted RBP27.36■■□□□ 1.97
MRPL55-230ENST00000489430 WASLO00401 505 aaPredicted RBP27.35■■□□□ 1.97
MRPL55-230ENST00000489430 NEUROD1Q13562 356 aa27.35■■□□□ 1.97
MRPL55-230ENST00000489430 POTEAQ6S8J7 498 aa27.35■■□□□ 1.97
MRPL55-230ENST00000489430 MINK1Q8N4C8 1332 aaPredicted RBP27.35■■□□□ 1.97
MRPL55-230ENST00000489430 NBPF1Q3BBV0 1214 aa27.33■■□□□ 1.97
MRPL55-230ENST00000489430 HIRIP3Q9BW71 556 aaPredicted RBP27.33■■□□□ 1.97
MRPL55-230ENST00000489430 PSME1Q06323 249 aa27.31■■□□□ 1.96
MRPL55-230ENST00000489430 ARHGEF28Q8N1W1 1705 aaKnown RBP27.3■■□□□ 1.96
MRPL55-230ENST00000489430 KRT28Q7Z3Y7 464 aa27.3■■□□□ 1.96
MRPL55-230ENST00000489430 TULP4Q9NRJ4 1543 aa27.3■■□□□ 1.96
MRPL55-230ENST00000489430 COL22A1Q8NFW1 1626 aaPredicted RBP27.3■■□□□ 1.96
MRPL55-230ENST00000489430 SPATA31A3Q5VYP0 1347 aa27.29■■□□□ 1.96
MRPL55-230ENST00000489430 XPCQ01831 940 aaPredicted RBP27.28■■□□□ 1.96
MRPL55-230ENST00000489430 SBNO1A3KN83 1393 aa27.27■■□□□ 1.96
MRPL55-230ENST00000489430 PRR36Q9H6K5 1346 aa27.25■■□□□ 1.95
MRPL55-230ENST00000489430 USP32Q8NFA0 1604 aa27.25■■□□□ 1.95
MRPL55-230ENST00000489430 AFF2P51816 1311 aa27.24■■□□□ 1.95
MRPL55-230ENST00000489430 C8orf37Q96NL8 207 aa27.24■■□□□ 1.95
MRPL55-230ENST00000489430 CENPJQ9HC77 1338 aaPredicted RBP27.23■■□□□ 1.95
MRPL55-230ENST00000489430 TNS3Q68CZ2 1445 aa27.22■■□□□ 1.95
MRPL55-230ENST00000489430 ADAMTS2O95450 1211 aa27.21■■□□□ 1.95
MRPL55-230ENST00000489430 PMFBP1Q8TBY8 1022 aa27.21■■□□□ 1.95
MRPL55-230ENST00000489430 CDK19Q9BWU1 502 aa27.21■■□□□ 1.95
MRPL55-230ENST00000489430 ARHGEF10O15013 1369 aa27.21■■□□□ 1.95
MRPL55-230ENST00000489430 GPRASP1Q5JY77 1395 aa27.21■■□□□ 1.95
MRPL55-230ENST00000489430 NUDT16Q96DE0 195 aaKnown RBP27.2■■□□□ 1.94
MRPL55-230ENST00000489430 NGLY1Q96IV0 654 aa27.2■■□□□ 1.94
MRPL55-230ENST00000489430 ROCK2O75116 1388 aaKnown RBP27.2■■□□□ 1.94
MRPL55-230ENST00000489430 TONSLQ96HA7 1378 aa27.2■■□□□ 1.94
MRPL55-230ENST00000489430 ATP7BP35670 1465 aa27.19■■□□□ 1.94
MRPL55-230ENST00000489430 RGPD8O14715 1765 aaPredicted RBP27.19■■□□□ 1.94
MRPL55-230ENST00000489430 FNBP4Q8N3X1 1017 aaPredicted RBP27.18■■□□□ 1.94
MRPL55-230ENST00000489430 CCDC61Q9Y6R9 512 aa27.18■■□□□ 1.94
MRPL55-230ENST00000489430 TRPM1Q7Z4N2 1603 aa27.18■■□□□ 1.94
MRPL55-230ENST00000489430 RXRBP28702 533 aa27.16■■□□□ 1.94
MRPL55-230ENST00000489430 NGDNQ8NEJ9 315 aaKnown RBP27.16■■□□□ 1.94
MRPL55-230ENST00000489430 NBPF8Q3BBV2 869 aa27.14■■□□□ 1.94
MRPL55-230ENST00000489430 CDK12Q9NYV4 1490 aaPredicted RBP27.13■■□□□ 1.93
MRPL55-230ENST00000489430 PLEKHG3A1L390 1219 aa27.13■■□□□ 1.93
MRPL55-230ENST00000489430 QTRT2Q9H974 415 aaKnown RBP27.12■■□□□ 1.93
MRPL55-230ENST00000489430 POLR3AO14802 1390 aaPredicted RBP27.11■■□□□ 1.93
MRPL55-230ENST00000489430 USP21Q9UK80 565 aa27.11■■□□□ 1.93
MRPL55-230ENST00000489430 ITSN1Q15811 1721 aa27.1■■□□□ 1.93
MRPL55-230ENST00000489430 RBM6P78332 1123 aaKnown RBP27.1■■□□□ 1.93
MRPL55-230ENST00000489430 SRPK2P78362 688 aaKnown RBP27.09■■□□□ 1.93
MRPL55-230ENST00000489430 TRPC5Q9UL62 973 aaPredicted RBP27.09■■□□□ 1.93
MRPL55-230ENST00000489430 LMOD2Q6P5Q4 547 aa27.08■■□□□ 1.93
MRPL55-230ENST00000489430 EVC2Q86UK5 1308 aa27.08■■□□□ 1.93
MRPL55-230ENST00000489430 CLSPNQ9HAW4 1339 aa27.08■■□□□ 1.93
MRPL55-230ENST00000489430 RALGAPBQ86X10 1494 aa27.06■■□□□ 1.92
MRPL55-230ENST00000489430 HAP1P54257 671 aaPredicted RBP27.06■■□□□ 1.92
MRPL55-230ENST00000489430 TRPM3Q9HCF6 1732 aaPredicted RBP27.06■■□□□ 1.92
MRPL55-230ENST00000489430 CARD11Q9BXL7 1154 aa27.05■■□□□ 1.92
MRPL55-230ENST00000489430 ACEP12821 1306 aa27.05■■□□□ 1.92
MRPL55-230ENST00000489430 SBNO2Q9Y2G9 1366 aa27.05■■□□□ 1.92
MRPL55-230ENST00000489430 BCL9LQ86UU0 1499 aa27.04■■□□□ 1.92
MRPL55-230ENST00000489430 TOPAZ1Q8N9V7 1692 aa27.04■■□□□ 1.92
MRPL55-230ENST00000489430 QRICH2Q9H0J4 1663 aa27.04■■□□□ 1.92
MRPL55-230ENST00000489430 BRD4O60885 1362 aaPredicted RBP27.03■■□□□ 1.92
MRPL55-230ENST00000489430 ATRNO75882 1429 aa27.02■■□□□ 1.92
MRPL55-230ENST00000489430 CABLES1Q8TDN4 633 aa27.02■■□□□ 1.92
MRPL55-230ENST00000489430 CABP2Q9NPB3 220 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms