RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 NBR1Q14596 966 aa24.38■■□□□ 1.49
POLR2J3-205ENST00000489144 CDCA8Q53HL2 280 aa24.38■■□□□ 1.49
POLR2J3-205ENST00000489144 KDM5AP29375 1690 aaKnown RBP24.37■■□□□ 1.49
POLR2J3-205ENST00000489144 SLC12A5Q9H2X9 1139 aa24.37■■□□□ 1.49
POLR2J3-205ENST00000489144 MYO3AQ8NEV4 1616 aa24.37■■□□□ 1.49
POLR2J3-205ENST00000489144 RIMS1Q86UR5 1692 aaKnown RBP24.36■■□□□ 1.49
POLR2J3-205ENST00000489144 METP08581 1390 aa24.36■■□□□ 1.49
POLR2J3-205ENST00000489144 TMEM2Q9UHN6 1383 aa24.36■■□□□ 1.49
POLR2J3-205ENST00000489144 KTN1Q86UP2 1357 aaKnown RBP24.35■■□□□ 1.49
POLR2J3-205ENST00000489144 SLC26A8Q96RN1 970 aa24.35■■□□□ 1.49
POLR2J3-205ENST00000489144 KNSTRNQ9Y448 316 aa24.35■■□□□ 1.49
POLR2J3-205ENST00000489144 PLEKHH1Q9ULM0 1364 aa24.34■■□□□ 1.49
POLR2J3-205ENST00000489144 TXNDC2Q86VQ3 553 aa24.33■■□□□ 1.49
POLR2J3-205ENST00000489144 CARD14Q9BXL6 1004 aa24.32■■□□□ 1.48
POLR2J3-205ENST00000489144 NRXN3Q9Y4C0 1643 aa24.32■■□□□ 1.48
POLR2J3-205ENST00000489144 SRPK2P78362 688 aaKnown RBP24.31■■□□□ 1.48
POLR2J3-205ENST00000489144 TULP4Q9NRJ4 1543 aa24.31■■□□□ 1.48
POLR2J3-205ENST00000489144 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.31■■□□□ 1.48
POLR2J3-205ENST00000489144 NOP58Q9Y2X3 529 aaKnown RBP24.3■■□□□ 1.48
POLR2J3-205ENST00000489144 MYBBP1AQ9BQG0 1328 aaKnown RBP24.29■■□□□ 1.48
POLR2J3-205ENST00000489144 SBNO2Q9Y2G9 1366 aa24.28■■□□□ 1.48
POLR2J3-205ENST00000489144 EVC2Q86UK5 1308 aa24.28■■□□□ 1.48
POLR2J3-205ENST00000489144 PARD3Q8TEW0 1356 aa24.27■■□□□ 1.48
POLR2J3-205ENST00000489144 RALBP1Q15311 655 aa24.27■■□□□ 1.48
POLR2J3-205ENST00000489144 AMER1Q5JTC6 1135 aaPredicted RBP24.27■■□□□ 1.48
POLR2J3-205ENST00000489144 SETD1AO15047 1707 aaKnown RBP24.27■■□□□ 1.48
POLR2J3-205ENST00000489144 NLRP1Q9C000 1473 aa24.26■■□□□ 1.47
POLR2J3-205ENST00000489144 RTL5Q5HYW3 569 aaPredicted RBP24.25■■□□□ 1.47
POLR2J3-205ENST00000489144 TNNT2P45379 298 aaPredicted RBP24.24■■□□□ 1.47
POLR2J3-205ENST00000489144 HDGFP51858 240 aaKnown RBP24.23■■□□□ 1.47
POLR2J3-205ENST00000489144 EID1Q9Y6B2 187 aa24.22■■□□□ 1.47
POLR2J3-205ENST00000489144 CDK19Q9BWU1 502 aa24.21■■□□□ 1.47
POLR2J3-205ENST00000489144 LRPPRCP42704 1394 aaKnown RBP24.21■■□□□ 1.47
POLR2J3-205ENST00000489144 PNISRQ8TF01 805 aaKnown RBP24.2■■□□□ 1.47
POLR2J3-205ENST00000489144 ADAMTS13Q76LX8 1427 aa24.2■■□□□ 1.46
POLR2J3-205ENST00000489144 NSD3Q9BZ95 1437 aa24.2■■□□□ 1.46
POLR2J3-205ENST00000489144 NUTM2FA1L443 756 aa24.19■■□□□ 1.46
POLR2J3-205ENST00000489144 NLRP13Q86W25 1043 aa24.19■■□□□ 1.46
POLR2J3-205ENST00000489144 THEMISQ8N1K5 641 aaPredicted RBP24.19■■□□□ 1.46
POLR2J3-205ENST00000489144 NCKAP5LQ9HCH0 1330 aa24.19■■□□□ 1.46
POLR2J3-205ENST00000489144 GLIPR1L2Q4G1C9 344 aa24.17■■□□□ 1.46
POLR2J3-205ENST00000489144 ADAMTSL3P82987 1691 aa24.16■■□□□ 1.46
POLR2J3-205ENST00000489144 ROBO2Q9HCK4 1378 aa24.16■■□□□ 1.46
POLR2J3-205ENST00000489144 PPP2R1AP30153 589 aa24.15■■□□□ 1.46
POLR2J3-205ENST00000489144 BRD4O60885 1362 aaPredicted RBP24.15■■□□□ 1.46
POLR2J3-205ENST00000489144 PLEKHG1Q9ULL1 1385 aa24.15■■□□□ 1.46
POLR2J3-205ENST00000489144 ABCC11Q96J66 1382 aa24.14■■□□□ 1.46
POLR2J3-205ENST00000489144 CEP170BQ9Y4F5 1589 aaPredicted RBP24.14■■□□□ 1.45
POLR2J3-205ENST00000489144 CABP1Q9NZU7 370 aa24.13■■□□□ 1.45
POLR2J3-205ENST00000489144 PAK3O75914 559 aaPredicted RBP24.12■■□□□ 1.45
POLR2J3-205ENST00000489144 PTPRUQ92729 1446 aa24.12■■□□□ 1.45
POLR2J3-205ENST00000489144 RBM33Q96EV2 1170 aaKnown RBP24.11■■□□□ 1.45
POLR2J3-205ENST00000489144 A0A1W2PP64 1363 aa24.1■■□□□ 1.45
POLR2J3-205ENST00000489144 ARHGAP23Q9P227 1491 aa24.1■■□□□ 1.45
POLR2J3-205ENST00000489144 SLIT1O75093 1534 aa24.1■■□□□ 1.45
POLR2J3-205ENST00000489144 ZMYND15Q9H091 742 aa24.09■■□□□ 1.45
POLR2J3-205ENST00000489144 AMOTL2Q9Y2J4 779 aa24.09■■□□□ 1.45
POLR2J3-205ENST00000489144 DLC1Q96QB1 1528 aa24.06■■□□□ 1.44
POLR2J3-205ENST00000489144 MORC1Q86VD1 984 aa24.06■■□□□ 1.44
POLR2J3-205ENST00000489144 GGNBP2Q9H3C7 697 aa24.06■■□□□ 1.44
POLR2J3-205ENST00000489144 ANKRD36BQ8N2N9 1353 aa24.05■■□□□ 1.44
POLR2J3-205ENST00000489144 WASLO00401 505 aaPredicted RBP24.05■■□□□ 1.44
POLR2J3-205ENST00000489144 RSPH6AQ9H0K4 717 aa24.05■■□□□ 1.44
POLR2J3-205ENST00000489144 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.04■■□□□ 1.44
POLR2J3-205ENST00000489144 ATAD2Q6PL18 1390 aa24.03■■□□□ 1.44
POLR2J3-205ENST00000489144 MED14O60244 1454 aa24.02■■□□□ 1.44
POLR2J3-205ENST00000489144 CD163L1Q9NR16 1453 aa24.02■■□□□ 1.44
POLR2J3-205ENST00000489144 CGNL1Q0VF96 1302 aa24.01■■□□□ 1.43
POLR2J3-205ENST00000489144 KCNA6P17658 529 aa24.01■■□□□ 1.43
POLR2J3-205ENST00000489144 ANKLE2Q86XL3 938 aa24■■□□□ 1.43
POLR2J3-205ENST00000489144 ADAMTS8Q9UP79 889 aa24■■□□□ 1.43
POLR2J3-205ENST00000489144 NUDT16Q96DE0 195 aaKnown RBP24■■□□□ 1.43
POLR2J3-205ENST00000489144 CPS1P31327 1500 aa24■■□□□ 1.43
POLR2J3-205ENST00000489144 FBLN1P23142 703 aa23.99■■□□□ 1.43
POLR2J3-205ENST00000489144 TBX22Q9Y458 520 aa23.99■■□□□ 1.43
POLR2J3-205ENST00000489144 TECPR2O15040 1411 aa23.99■■□□□ 1.43
POLR2J3-205ENST00000489144 ZBED9Q6R2W3 1325 aa23.99■■□□□ 1.43
POLR2J3-205ENST00000489144 PRR36Q9H6K5 1346 aa23.99■■□□□ 1.43
POLR2J3-205ENST00000489144 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.99■■□□□ 1.43
POLR2J3-205ENST00000489144 TERF2IPQ9NYB0 399 aa23.98■■□□□ 1.43
POLR2J3-205ENST00000489144 NPC1L1Q9UHC9 1359 aa23.98■■□□□ 1.43
POLR2J3-205ENST00000489144 KNDC1Q76NI1 1749 aa23.98■■□□□ 1.43
POLR2J3-205ENST00000489144 PUS7Q96PZ0 661 aaKnown RBP23.98■■□□□ 1.43
POLR2J3-205ENST00000489144 PPIP5K1Q6PFW1 1433 aa23.97■■□□□ 1.43
POLR2J3-205ENST00000489144 FAM135BQ49AJ0 1406 aa23.97■■□□□ 1.43
POLR2J3-205ENST00000489144 HDGFL2Q7Z4V5 671 aaPredicted RBP23.97■■□□□ 1.43
POLR2J3-205ENST00000489144 CCDC146Q8IYE0 955 aa23.97■■□□□ 1.43
POLR2J3-205ENST00000489144 WDR43Q15061 677 aaKnown RBP eCLIP23.95■■□□□ 1.42
POLR2J3-205ENST00000489144 VSIG10Q8N0Z9 540 aa23.95■■□□□ 1.42
POLR2J3-205ENST00000489144 IRX6P78412 446 aaPredicted RBP23.95■■□□□ 1.42
POLR2J3-205ENST00000489144 ZRANB1Q9UGI0 708 aa23.95■■□□□ 1.42
POLR2J3-205ENST00000489144 FYB1O15117 783 aa23.94■■□□□ 1.42
POLR2J3-205ENST00000489144 SETD1BQ9UPS6 1966 aaKnown RBP23.94■■□□□ 1.42
POLR2J3-205ENST00000489144 HSPA2P54652 639 aa23.93■■□□□ 1.42
POLR2J3-205ENST00000489144 MTHFSP49914 203 aa23.92■■□□□ 1.42
POLR2J3-205ENST00000489144 ZNF142P52746 1687 aaPredicted RBP23.91■■□□□ 1.42
POLR2J3-205ENST00000489144 PMFBP1Q8TBY8 1022 aa23.91■■□□□ 1.42
POLR2J3-205ENST00000489144 SIRT1Q96EB6 747 aa23.9■■□□□ 1.42
POLR2J3-205ENST00000489144 CCDC61Q9Y6R9 512 aa23.9■■□□□ 1.42
POLR2J3-205ENST00000489144 NINLQ9Y2I6 1382 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms